LOCUS       NM_001017451            2959 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Rattus norvegicus solute carrier family 35, member F6 (Slc35f6),
            mRNA.
ACCESSION   NM_001017451 XM_233927
VERSION     NM_001017451.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Schroder,B.A., Wrocklage,C., Hasilik,A. and Saftig,P.
  TITLE     The proteome of lysosomes
  JOURNAL   Proteomics 10 (22), 4053-4076 (2010)
   PUBMED   20957757
  REMARK    Review article
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Kashiwaya,K., Hosokawa,M., Eguchi,H., Ohigashi,H., Ishikawa,O.,
            Shinomura,Y., Nakamura,Y. and Nakagawa,H.
  TITLE     Identification of C2orf18, termed ANT2BP (ANT2-binding protein), as
            one of the key molecules involved in pancreatic carcinogenesis
  JOURNAL   Cancer Sci 100 (3), 457-464 (2009)
   PUBMED   19154410
REFERENCE   3  (bases 1 to 2959)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   4  (bases 1 to 2959)
  AUTHORS   Schroder,B., Wrocklage,C., Pan,C., Jager,R., Kosters,B.,
            Schafer,H., Elsasser,H.P., Mann,M. and Hasilik,A.
  TITLE     Integral and associated lysosomal membrane proteins
  JOURNAL   Traffic 8 (12), 1676-1686 (2007)
   PUBMED   17897319
REFERENCE   5  (bases 1 to 2959)
  AUTHORS   Boonen,M., Hamer,I., Boussac,M., Delsaute,A.F., Flamion,B.,
            Garin,J. and Jadot,M.
  TITLE     Intracellular localization of p40, a protein identified in a
            preparation of lysosomal membranes
  JOURNAL   Biochem J 395 (1), 39-47 (2006)
   PUBMED   16367739
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085904.1.
            
            On Apr 29, 2005 this sequence version replaced XM_233927.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085904.1, CB605606.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..2959
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /note="solute carrier family 35, member F6"
                     /db_xref="GeneID:298851"
                     /db_xref="RGD:1309228"
     exon            1..108
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..1150
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /note="transmembrane protein C2orf18 homolog; ANT2-binding
                     protein; transport and Golgi organization 9 homolog"
                     /codon_start=1
                     /product="solute carrier family 35 member F6 precursor"
                     /protein_id="NP_001017451.1"
                     /db_xref="GeneID:298851"
                     /db_xref="RGD:1309228"
                     /translation="MAWTKYQLFLAGLMLVTGSINTLSAKWADNFEAEGCGGSQEHSF
                     KHPFVQAVGMFLGEFSCLAAFYLLKCRARRQSDSSVEPRQPFNALLFLPPALCDMTGT
                     SIMYVALNMTSASSFQMLRGAVIIFTGLFSVAFLDRRLVPSQWLGILITIAGLVVVGL
                     ADLLSKHDSQHKLSEVITGDLLIIMAQIIIAIQMVLEEKFVYKHNIHPLQAVGIEGFF
                     GFVILSLLLVPMYYIPTASFSGNPRGVLEDALDAFCQVGRQPLIALALLGNISSIAFF
                     NFSGISVTKELSATTRMVLDTLRTVVIWAFTLALGWEVFHPLQILGFLILLMGTALYN
                     GLHRPLLACLSRRWRHPTQEGEQERLLGDSRTPINETS"
     exon            109..181
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /inference="alignment:Splign:2.1.0"
     exon            182..353
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /inference="alignment:Splign:2.1.0"
     exon            354..566
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /inference="alignment:Splign:2.1.0"
     exon            567..677
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /inference="alignment:Splign:2.1.0"
     exon            678..2930
                     /gene="Slc35f6"
                     /gene_synonym="ANT2BP; RGD1309228"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggtttagg tggtctccgg tgtccaccac tatggcctgg acaaagtacc agttgttcct
       61 ggccgggctc atgctggtca ccggctccat caacacgctt tcagcaaagt gggcggacaa
      121 cttcgaagct gagggctgtg gaggaagcca ggagcacagc ttcaagcatc ccttcgtcca
      181 ggcagtgggc atgttcctgg gagagttctc gtgccttgct gccttctacc tgctcaaatg
      241 ccgagccaga agacaatcag actccagtgt agagccccgg cagcccttca acgccctact
      301 tttcctgccc ccagccctat gtgacatgac tgggactagc atcatgtatg tggccctgaa
      361 catgaccagt gcctcaagct tccagatgct gcggggtgca gtgatcatct tcacaggcct
      421 gttctcagtg gccttcctgg accggaggct ggtaccaagc cagtggctgg gcatcctgat
      481 cactattgcg ggactggtgg tcgttggcct ggctgacctc ctgagcaagc atgacagtca
      541 acacaagctc agtgaagtaa tcacaggtga cttgttgatc atcatggccc agatcatcat
      601 tgccatccag atggtgctag aggagaagtt tgtctacaaa cacaacatcc acccactcca
      661 ggcagtgggc atcgagggct tcttcggctt tgtgatcctc tccctactgc tggtgcccat
      721 gtactacatc cccactgcct cctttagtgg caaccctcgt ggggtgctgg aagacgctct
      781 ggatgccttc tgccaggtgg gccggcagcc cctgatcgcc ctggctctgc tgggtaacat
      841 cagcagcatt gccttcttca acttttcggg gatcagtgtc accaaggaac tgagtgccac
      901 cacccgcatg gtactagaca ccctgcgcac cgtggtcatc tgggccttca ccctcgcact
      961 gggctgggag gtcttccatc cactgcagat ccttggtttc ctcatcctcc ttatgggcac
     1021 cgccctgtac aacgggctgc accgaccact gctagcctgc ctgtccagac gctggcgaca
     1081 ccctacccag gagggagagc aagagagact gctgggtgac agccggactc ccatcaatga
     1141 gaccagctga gctgcagtgg gatctctatt gccaccagat ggctgaggcc atgcagaccg
     1201 gtgggctgtg agtgccctgt cccaaggcct caccccaccc atccctactg accccactgc
     1261 acagttgctg ctggagagga tgggaggaca ccaggtcctg ctttattcct gaggcctgaa
     1321 atattgggac ccagccccca caggctcagc tatggcaacc actctcagcc tcccagttct
     1381 gctgcactag aacaaaattg cgaacttgaa tggcaagaaa ttacaaccct agtatttctg
     1441 ttacacacta acttgtggta gaatatctag cttctgaact gtaagctaca gagaagtcag
     1501 ctaacaggtt caaaccagaa ctaagagact attctgcaaa gcctgtctaa aaacctggtt
     1561 tctggctcag ctgcaggctc tgtgcgtgcc caggtctgtg ctttgcagca caggtgtata
     1621 taatgtgtcc ttggtgcctt gcagccccag catcctgtgg gcctctgatt gtcactggta
     1681 tgagaaaaga gttgcacacc agtattcctc ctccccatgg tgggctcttt gatattttta
     1741 ttttggtttg gcttggggtt tttgccatta catggccctg gctatcctga aactcatgat
     1801 gtagaccagg ctaacctcaa actcacagag attcacctac tacttcctca gtgcggatta
     1861 aaagtgtaca tcttcatgcc caacacctcc ttgatgtttt gatgttctgt tcttcagacc
     1921 ccaaggcctc tctgcctggg gcattcctgg cagcccttgg aaatcacttc acaaacttgt
     1981 tttgttttct tttgttttgt ttgaaacgaa agtcttattg tgtagcacca gcattcaact
     2041 tcctattcaa cttcctcaca ctcagccttc ctgcctcacc ctcccaagtg ctgagagact
     2101 ggaatgcgaa gcactgccca gaaaagcttc cattttaaac taaggagacc aaagcctgtt
     2161 ggcaagaggg atctgtgctt actgccggct tgggccaaag acctgagagg cctctatatc
     2221 cgaagctcca tgactgttag agagacctag agccagtgtg gccccactcc cagtaatcca
     2281 gacccataat gtccacagga tgacatactt accaggggtc ttccttagtg ggtaagctgg
     2341 catccccagc actgggttaa atgcttcatc ctcactccct ctcatgatat ctgcaaaggg
     2401 aaaagccaag gcactcccag gaggcaaagt gaggcacgca cagaaccagt gtcccaacca
     2461 gccacgtgtg gcccactgct atacaggtct ctgtgggcct ttggggtggc tttctatgac
     2521 tgggctaaaa aaactaatat tgttaccctg cagatgctct cactctcggt agaagaaagg
     2581 cagcaggaag gagccctggg gccctggccg cccttaatta catacagcct tgcctgtggg
     2641 gatgttttaa gtggggatgt cctaagtggc agttcaatag taaacactaa cagctttctt
     2701 tgtgagggga aggggccttg attagcaaag cccttgcatt tgactccaac agattctaat
     2761 ggtgtgtcaa ggaaggaaac ttcctttctg ttagctcgga gtcccagagc cccaagcttc
     2821 tctggactac agtctgtcac agggagaagt aaatgggaat tctgtgccta tttactcaag
     2881 gtgacagaaa gtggcagctg tcttgtacaa aaataaaaac cagggcccta aaaaaaaaaa
     2941 aaaaaaaaaa aaaaaaaaa
//
