LOCUS       XM_008770650            1941 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus solute carrier family 35, member F4
            (Slc35f4), mRNA.
ACCESSION   XM_008770650
VERSION     XM_008770650.3
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086033) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Aug 6, 2024 this sequence was replaced by
            NM_001433014.1.
            
            On Jan 21, 2021 this sequence version replaced XM_008770650.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1941
                     /gene="Slc35f4"
                     /note="solute carrier family 35, member F4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 3 long SRA reads, 13 Proteins"
                     /db_xref="GeneID:305865"
                     /db_xref="RGD:1561109"
     CDS             287..1744
                     /gene="Slc35f4"
                     /codon_start=1
                     /product="solute carrier family 35 member F4"
                     /protein_id="XP_008768872.2"
                     /db_xref="GeneID:305865"
                     /db_xref="RGD:1561109"
                     /translation="MDVKAAPNGVATIEDRILRITGYYGYYPGYSSQKSTSRSSVTRC
                     KPGPNCPSSHSSISRQLSPLSVTEDSAAPILELQSRGSSGVCGRRVERQNRSGDDGAQ
                     NHPESSSQENGLKARCLSCTSVVLKTIWGLLIILSVSSSWVGTTQIVKITYKNFYCPF
                     FMTWFSTNWNIMFFPVYYSGHLATAQEKQSPMKKFRECSRIFGEDGLTLKLFLKRTAP
                     FSILWTLTNYLYLLALKKLTATDVSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMA
                     ITGIVMMAYADNFHADSIIGVAFAVGSASTSALYKVLFKMFLGSANFGEAAHFVSTLG
                     FFNLIFISFTPIILYFTKVEHWSSFAALPWGCLCGMAGLWLAFNILVNVGVVLTYPIL
                     ISIGTVLSVPGNAAVDLLKQEVIFNVVRLAATIIICIGFLLMLLPEEWDEITLRFINS
                     LKEKKSEEHVEDLTDVSVHLRSRSRVNGTVSLPLA"
     polyA_site      1941
                     /gene="Slc35f4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgagctggtg gcgggagggt gagctgctag gctgacagaa aggccggcca gagtgggggc
       61 cgctccgctg ccgctgccgt tgccgccgcc gctgtaatgc gaagcccgag ctgcgcccag
      121 cggtggagtc agagccgggg cgcgggagca ggagctgcaa catcagcacc agcggcggcg
      181 gcggcgacgg cggcggcggc ggcggcggcg gtacctgcag tagctcccgg gccccgcgct
      241 ttgctctacg ccccgcggcg ccgggagccg ccgccccgcg ttctcaatgg atgtcaaggc
      301 ggcccccaac ggggtggcca ccatcgagga ccggatcctg cggattactg gctactatgg
      361 ctattacccg ggttactcca gccagaaaag tacctccaga tcatcagtga ctcgatgcaa
      421 gccaggaccc aactgcccca gctcacacag cagcatcagc aggcaactgt cccctctgtc
      481 ggtcacggaa gattctgccg ctcctattct tgagcttcag agcagaggat cctccggggt
      541 ttgtggtcga agagtggaga gacagaacag atcaggggat gatggggcac agaatcaccc
      601 tgagagcagc agccaagaaa acggactcaa ggcgcgctgc ctgtcctgca cgtctgtggt
      661 tctgaagacc atctggggac tcttgatcat cctgtcagtg tcgtcatctt gggttggaac
      721 cacacaaatt gtaaaaatca cttacaagaa cttttactgt ccctttttca tgacttggtt
      781 ttcaacaaac tggaacatta tgttcttccc agtctattac tccggccatc tggccacggc
      841 tcaagaaaag cagtcgccaa tgaaaaaatt cagggaatgc agtcggatct ttggtgaaga
      901 tggcctgaca ctgaagctct ttcttaaaag aactgctccc ttttctattc tgtggacttt
      961 gacaaattac ctgtatttac tggctttaaa gaagctgaca gccactgacg tctctgctct
     1021 gttctgttgc aacaaagcct ttgtcttctt gctgtcctgg attgtgctga aggacaggtt
     1081 catgggagta cggatcgtcg cagcaataat ggcaattacc ggcatcgtca tgatggcgta
     1141 cgcggataat ttccatgctg attccatcat cggtgtggca tttgctgtgg gctcagcctc
     1201 cacatctgca ctgtataagg ttctgtttaa gatgtttctg ggcagtgcca actttggtga
     1261 agctgcacac tttgtctcta ccttggggtt cttcaatttg atctttatct ccttcacgcc
     1321 catcatcctg tatttcacca aggtggagca ctggtcctcc tttgctgcac tgccctgggg
     1381 ctgtctctgt gggatggcag gactatggct agcattcaac atcctggtaa acgttggagt
     1441 ggtcctgaca tatccaatcc tcatctccat tggaacagta ctcagtgttc ctggaaacgc
     1501 agctgtggat ctcctgaagc aagaggtgat attcaatgtg gtccgcctgg ctgccaccat
     1561 catcatctgt atcgggtttc ttctgatgct actgccggag gagtgggatg aaattactct
     1621 gagatttatc aacagcctga aggagaagaa gagcgaggag catgtggaag acttgacaga
     1681 tgtgagtgtg cacctgagga gcagaagcag ggtcaacggg acagtgtccc taccgctggc
     1741 ttgaacagaa acgacccctg gatgcacgtg tgtgtatatt ctgtgaatat aaaattttct
     1801 cactacctgt acattcaaat gacactatca actccgagtt taaataaacc atatgtgaaa
     1861 tatcaccaag aataaaagtt tacatttata tgcatatcaa ggaactgatg taaataatca
     1921 taataaaatt ttttactaaa a
//
