LOCUS       NM_001134687            2841 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus solute carrier family 35, member E3 (Slc35e3),
            mRNA.
ACCESSION   NM_001134687 XM_001080983 XM_576227
VERSION     NM_001134687.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC166468.1.
            
            On or before Oct 25, 2008 this sequence version replaced
            XM_001080983.1, XM_576227.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166468.1, FQ223116.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132308,
                                           SAMD00155314 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..2841
                     /gene="Slc35e3"
                     /gene_synonym="RGD1564876"
                     /note="solute carrier family 35, member E3"
                     /db_xref="GeneID:362883"
                     /db_xref="RGD:1564876"
     exon            1..577
                     /gene="Slc35e3"
                     /gene_synonym="RGD1564876"
                     /inference="alignment:Splign:2.1.0"
     CDS             176..1117
                     /gene="Slc35e3"
                     /gene_synonym="RGD1564876"
                     /codon_start=1
                     /product="solute carrier family 35 member E3"
                     /protein_id="NP_001128159.1"
                     /db_xref="GeneID:362883"
                     /db_xref="RGD:1564876"
                     /translation="MASLADRVRGNGRIAAGLLFNLLVSICIVFLNKWIYVHHGFPNM
                     SLTLVHFVVTWLGLYVCQKLDIFAPKSLPLSKLLLLALSFCGFVVFTNLSLQNNTIGT
                     YQLAKAMTTPVIIAIQTFWYQKRFSIRIQLTLIPITVGVILNSYYDVKFHSLGMVFAA
                     LGVVVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPCFEPVFAEGGIFGP
                     WSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLCGGYILFKDPL
                     SVNQGLGILCTLFGILAYTHFKLSEQEGSKSKLVQRP"
     exon            578..688
                     /gene="Slc35e3"
                     /gene_synonym="RGD1564876"
                     /inference="alignment:Splign:2.1.0"
     exon            689..847
                     /gene="Slc35e3"
                     /gene_synonym="RGD1564876"
                     /inference="alignment:Splign:2.1.0"
     exon            848..930
                     /gene="Slc35e3"
                     /gene_synonym="RGD1564876"
                     /inference="alignment:Splign:2.1.0"
     exon            931..2816
                     /gene="Slc35e3"
                     /gene_synonym="RGD1564876"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgcaggct tggacccggc tggcgcatgc ctgtctccgg ccggactgtg aggcgggagg
       61 ctgcgggcgc gcagcggcgg agagccgggg tagccggaga gcagccggga gccccgtggg
      121 gaggctggac agcccgggct ccgccgaggg cgctgccccg cagccgtcgg gcgttatggc
      181 atcgctggcc gaccgggtcc ggggcaacgg gcgcatcgcc gccgggctcc tgttcaacct
      241 gctggtgtcc atctgcatcg tgttcctcaa caaatggatc tatgtacacc acggcttccc
      301 caacatgagc ctgaccctcg tgcacttcgt ggtcacctgg ctgggcttgt acgtctgcca
      361 gaaactggac atctttgccc ccaagagtct gccgctctcc aagctcctcc tcctggccct
      421 cagcttctgt ggctttgtgg tcttcaccaa cctttctctg cagaacaaca ccataggcac
      481 ctatcagctg gccaaggcca tgacgacgcc ggtgatcata gccatccaga ccttctggta
      541 ccagaaacga ttctccatca gaatacagct cacgctgatt cctattactg taggtgtaat
      601 cctaaattct tattacgatg tgaagtttca ttcccttgga atggtgtttg ccgctcttgg
      661 tgtggtagtc acatcccttt atcaagtgtg ggtcggagcc aagcagcatg aactgcaggt
      721 gaactccatg cagctgcttt actaccaggc ccccatgtct tcggccatgc tgctggtggc
      781 tgtgccctgc tttgagccag tgtttgcaga gggaggaata tttggtccct ggtcagtttc
      841 tgctttgctt atggtgctgc tgtctggagt aatcgctttc atggtgaact tatcgattta
      901 ctggatcatt gggaacacat caccagtcac ctacaacatg ttcggacatt tcaagttctg
      961 catcaccctg tgtggaggct acatcttatt taaagatcca ctgtcggtaa accaagggct
     1021 cggcatccta tgcacactgt ttggtatcct cgcctatacc cactttaaac tcagcgaaca
     1081 ggaaggcagt aagagtaagc tggtccagcg gccctgagct ttgacagaga agagaaaatg
     1141 gcaccaaaag aaggagaaac agcagtgcgt ggaaaagctc cctgcagaat tcagtcattg
     1201 atgtacaaga agtattttct tcacagataa tgagttttta gtacctttta tagatttaat
     1261 ttttttttta aaccaaaatg gttcaggctt atctttaaag gctttatgaa cctggagctg
     1321 acactcagtg gtcgagtgtt tgcctcacac gcatgagacc ctggcctcaa accccagcac
     1381 cgtcaaggaa atgctcaagt acaggaaagc tcagttcccc tggaatgacg tggacgctcc
     1441 agtgctgcag ctgtgctgtg gcagtcggtg tccgtgacct cccggggaag ggcacgccaa
     1501 actaccgctg cctcacccat gccttcccat cgggaagttc ttcgtccttc agacagggta
     1561 gtggtcatac ttgttttgag actggatctc actgtgtcgc cctgactggt ctggaattcc
     1621 ctacacagac caaactggct tttaactcta ccactacgtc tagcctctag cttctttatt
     1681 atttcagcct agaactgaaa tatttataga aagcaagctg tcatggacat gatcataaaa
     1741 caagctacga ctctgaaagt gtcacctttt cagtagaaaa ctgctagaag ccgcccttcc
     1801 ctcttagacg gggcagggtg gggctggctt gagcccagag ccagctccac agtgcagtct
     1861 gcctgcgcga gagtgagtgt ttcctggcgg gaagaacagt gttggtaggt gggtgcctgc
     1921 cttgcaccct cacgcaggtc ccttcttgtc cctgtaactg cctccccagc ttgctcaatc
     1981 atttcatttt agggatccct gatacggcct ctccctccct cccaatgctc cttctgtcca
     2041 ccaaagcagt gggtggggca cattgtatgt cgttgggaac tggactgaat tagcaaaagc
     2101 tatccaaatt ctgggcacaa acttggtgaa aaatagagac atgaaagaga agtagaaaac
     2161 tagctaatac ctagctagtt gtgggagggt tagaggaatt gagaatatgt ttaattgaga
     2221 tgcagacaga atacggggga ctccagccaa tagagcgctg ggtatttaat tgcaaaagtg
     2281 tgtgtctgcc ttcaagtatc ttgacgtttc gccattgata acctcagaag agtcggatca
     2341 cttggaataa taacgttttc taaacataca ctttctgtga gaaaacagct taagacaaag
     2401 attcatcttg tgacaacaaa tttaatttca aattttctct ttcacagaaa gaagtagctt
     2461 ttaatatatt agggtttttt tgttttgttt ttgttttgtt ttgtttttgt agtgatagtt
     2521 tttagggttt tttttaacca aataaaaaag cctgggttgt atccccagca ctgccaaaac
     2581 aaaacctctt tgagtaatca ggaaacaggc tggcaagaga gacactccta taccctggga
     2641 tttgggcagc tgagtgggcc taaagtccct tggccatgaa gaccacacag acttccaggg
     2701 cagcctgaat tacatactga gacccaatta agggggaagg aaatgtgcct ggtttaggat
     2761 ctttttcctg gcccatttaa agtacaaagc ctcattaaat gtgtactttt ggagaaaaaa
     2821 aaaaaaaaaa aaaaaaaaaa a
//
