LOCUS       NM_001107998            2401 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus solute carrier family 35, member E2B (Slc35e2b),
            mRNA.
ACCESSION   NM_001107998 XM_001077505 XM_233711
VERSION     NM_001107998.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Cui W, Dai X, Marcho C, Han Z, Zhang K, Tremblay KD and Mager J.
  TITLE     Towards Functional Annotation of the Preimplantation Transcriptome:
            An RNAi Screen in Mammalian Embryos
  JOURNAL   Sci Rep 6, 37396 (2016)
   PUBMED   27869233
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_233711.4, XM_001077505.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132263,
                              SAMD00132269 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2401
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /note="solute carrier family 35, member E2B"
                     /db_xref="GeneID:313765"
                     /db_xref="RGD:1309076"
     exon            1..752
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     exon            753..1224
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     CDS             903..2120
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /note="solute carrier family 35, member E2"
                     /codon_start=1
                     /product="solute carrier family 35 member E2B"
                     /protein_id="NP_001101468.1"
                     /db_xref="GeneID:313765"
                     /db_xref="RGD:1309076"
                     /translation="MSSAAKSQVLEETAPGCEEEPKGKTLFTWGSLFGHRSEKIVFTK
                     GDGSPEESLLTVTITETTVIESDLGVWSSRALIYLTLWFFFSFCTLFLNKYILSLLEG
                     EPSMLGAVQMLSTTLIGCVKIFVPCCLYQHKTRLSYPPNFIMTMLFVGLMRFATVVLG
                     LVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEI
                     SFNILGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVALLIPAWTF
                     FMDVPVIGGSGKSFSYSQDIVLLLLTDGALFHLQSVTAYALMGKISPVTFSVASTVKH
                     ALSIWLSIIVFGNKITSLSAIGTILVTVGVLLYNKARQYQQETMQSLVTATSQGPNDD
                     TEPLVSQDSRQHH"
     exon            1225..1360
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     exon            1361..1488
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     exon            1489..1609
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     exon            1610..1663
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     exon            1664..1736
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     exon            1737..1882
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
     exon            1883..2401
                     /gene="Slc35e2b"
                     /gene_synonym="Slc35e2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attcgtaggt tcgccattga gcgcttcgcg tactctgact ttctagtcag attttaggct
       61 ccttgaaacc aaaccctggt ttgacccaga ggtccgtacc ttcgcggcct cagagaattg
      121 gctcctccac cttggtctcg atggaacgtt ctggaatgta ccacaggcga gaggagcgac
      181 acttgtgctt tcgtccagca tcacagaccc tggagtggtg ggacgttccg gaaggtgcca
      241 gcggaaggcc acaaagcggt ggtgtggccc cgcatcgtcg cccgtcccgt ggtttgtggc
      301 ggaccgttac cgaaggtgag aatgcgccgt tagggcctcc tagttcccca tggtgggctg
      361 cggtggaacg tcctggaagg tgcctagtgt gtcggtaggg ggcgtgtcct cttccgttcc
      421 cagtccgcca gggcatcctg tgcgtcactt ccggctccct ctccgcccac cagtgtgtgt
      481 cccaaatcta aaatccgtag gatgtctgct agccgctctc gcccttggct ctgaacccct
      541 caggttgaag ttcctgggcc ccgagtcggc ggcgtgggga aactggctgt atcttccgtg
      601 agcatgggcg gaggctgtgc ataaactcca gtggcagccc tcagaactga gccggggacc
      661 gggggcacct gccctggagt cagcccaggt caatttaggg acccttggca ccgggcgccc
      721 aggtggcggg cttcgccggg ctggacgcac agccttactt tgttggagac tagcatgttg
      781 gggtcaacat tcatgcaaac caggactcct gcctcttcct ccagctgtgt ctctctgctt
      841 gggcagttgc tttgatccat gtggttcatc tttgagattc actcctcaca agtgccctca
      901 gcatgtcatc agcagcaaaa tcccaagtgc tggaggagac agctcctggc tgtgaagagg
      961 agccaaaagg gaaaacactt ttcacttggg ggtctctttt tggtcaccgg agtgagaaga
     1021 ttgtctttac taaaggtgat ggcagcccag aggagagcct gcttactgtc accatcacgg
     1081 agactactgt cattgagtcg gacctcggcg tgtggagttc aagagctctc atctacctca
     1141 cgctgtggtt cttcttcagc ttctgtactc tgttcctcaa caagtacatc ctgtctctgt
     1201 tagaaggaga gcctagcatg ttaggtgctg tgcagatgct gtcaacgaca ttaattggat
     1261 gtgttaaaat atttgttcct tgctgtttat atcaacacaa aacccggctc tcttacccac
     1321 ccaatttcat catgactatg ctcttcgtgg gccttatgag gtttgcaacg gtggttttag
     1381 ggctagttag cctcaagaac gtggcagtgt cctttgctga gacggtgaag agctccgctc
     1441 ccattttcac tgtaatcatg tctcggatga ttctggggga gtacacaggg ctgctggtca
     1501 acctgtccct catcccagtc atgggaggac tagcgttatg cactgccacg gaaataagct
     1561 tcaacatcct ggggttttca gctgcactat ccaccaacat tatggattgt ttgcagaatg
     1621 ttttttcaaa aaagcttctc agtggggaca aatacaggtt ctcggccccg gaactgcaat
     1681 tctacaccag tgctgctgct gtggccttgc tgattccagc atggaccttc ttcatggatg
     1741 tccctgtgat tggtgggagt gggaagagct tcagctacag ccaggacatc gtgctgttgc
     1801 tgctgacaga tggcgccttg tttcaccttc agagtgtcac tgcatatgcc ctgatgggaa
     1861 agatctcccc tgtgactttc agtgtcgcca gtactgtgaa gcacgccttg tccatctggc
     1921 ttagcatcat cgtttttgga aacaaaatca ccagcctgtc ggccattggc accatccttg
     1981 tcacagtggg tgtcctgctc tacaacaagg ccaggcagta tcagcaagag actatgcaga
     2041 gtctggtcac agccaccagc caaggcccaa acgatgacac agagccactg gtttcccaag
     2101 actctagaca gcaccactga tcacctgatg tttgaccagg tccagactgt ccctctgtac
     2161 tctgtgctgg aacagagaag caagtgatgc agggcaggtc tcttgctcct ttctggacat
     2221 aaaatgggga atttgggact cagcttctgc ctgatagagc cctgcaggaa gattcaaatg
     2281 acctgtagct cctctggctg catttgaacc aatgtctctg tgcccagcct acaactgggc
     2341 aatatctctg tggggccaac tatggaataa gcacaggctc cagtaccaac ggaagttgct
     2401 g
//
