LOCUS       NM_001109107            3345 bp    mRNA    linear   ROD 31-MAY-2024
DEFINITION  Rattus norvegicus solute carrier family 35, member E1 (Slc35e1),
            mRNA.
ACCESSION   NM_001109107 XM_001067921 XM_573876
VERSION     NM_001109107.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Cros,N., Tkatchenko,A.V., Pisani,D.F., Leclerc,L., Leger,J.J.,
            Marini,J.F. and Dechesne,C.A.
  TITLE     Analysis of altered gene expression in rat soleus muscle atrophied
            by disuse
  JOURNAL   J Cell Biochem 83 (3), 508-519 (2001)
   PUBMED   11596118
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BF406746.1, BF565650.1, CB780985.1, CB316326.1, EV776552.1,
            CB609486.1, CR754900.1, DY319179.1, AW142386.1 and AA925310.1.
            
            On Jan 12, 2008 this sequence version replaced NM_001109107.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-386               BF406746.1         1-386
            387-926             BF565650.1         7-546               c
            927-1005            CB780985.1         238-316
            1006-1103           CB316326.1         512-609
            1104-1504           EV776552.1         90-490
            1505-1858           CB609486.1         203-556
            1859-1883           CR754900.1         44-68
            1884-2544           DY319179.1         3-663
            2545-3057           AW142386.1         32-544
            3058-3345           AA925310.1         1-288               c
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..3345
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /note="solute carrier family 35, member E1"
                     /db_xref="GeneID:498599"
                     /db_xref="RGD:1561342"
     exon            1..438
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /inference="alignment:Splign:2.1.0"
     CDS             18..1247
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /codon_start=1
                     /product="solute carrier family 35 member E1"
                     /protein_id="NP_001102577.2"
                     /db_xref="GeneID:498599"
                     /db_xref="RGD:1561342"
                     /translation="MAAAAAAGPGAGAGIPGASGGGGAREGARVAALCLLWYALSAGG
                     NVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPASGPL
                     LPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEK
                     QSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIH
                     HLRLLNILGCHAVFFMIPTWVLVDLSTFLVSSDLAYVSQWPWTLLLLVVSGFCNFAQN
                     VIAFSILNLISPLSYSVANATKRIMVIAVSLIMLRNPVTSTNVLGMMTAILGVFLYNK
                     TKYDANQQARRHLLPVSTSDLSNREHLRSPMEKPHNGALFPQQGDFQYRNILLTDHFQ
                     YSRQGHPNSYALSRHDV"
     exon            439..509
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /inference="alignment:Splign:2.1.0"
     exon            510..647
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /inference="alignment:Splign:2.1.0"
     exon            648..773
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /inference="alignment:Splign:2.1.0"
     exon            774..1019
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /inference="alignment:Splign:2.1.0"
     exon            1020..3328
                     /gene="Slc35e1"
                     /gene_synonym="RGD1561342"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggccgctg gggcaggatg gcggcggcgg cagctgcggg tcccggcgcg ggcgcgggga
       61 tcccgggcgc gagtggcggc ggcggggcgc gcgagggtgc gcgcgtggcg gcgctgtgtc
      121 tactatggta cgcgctgagc gcgggcggta acgtggtcaa caaggtgatt ctgagcgcct
      181 tcccgttccc agtcaccgtg tctctgtgcc acatcctagc gctgtgcgcg gggttgccgc
      241 cgctactgcg cgcctggcgc gtgccgcccg cgccgcccgt gtccggtccc ggacccagcc
      301 cgcatccggc gtccggcccg ctgctgccgc cgcgcttcta tccgcgttac gttctgccgc
      361 ttgcctttgg caagtacttc gcgtcggtgt cggcgcatgt cagcatttgg aaggtgccgg
      421 tctcctacgc gcacaccgtc aaggccacca tgcccatctg ggtggtcctc ctgtcccgga
      481 tcatcatgaa ggagaaacag agcaccaagg tatacctgtc actggtcccc atcatcagcg
      541 gagtcctgct agccactgtc acagagctgt ccttcgacgt gtgggggctg gtcagcgccc
      601 tggcagccac gctatgcttc tcccttcaga acatcttctc caaaaaggtg ttgagggact
      661 ccaggatcca ccacctgcgg ctgctcaaca tcctgggctg ccacgccgtg tttttcatga
      721 tccccacgtg ggttctggtg gacctctcca ccttcctggt cagcagtgac ctggcctatg
      781 tgtctcagtg gccctggaca ctgctgcttt tggtggttag tggcttctgc aactttgcac
      841 agaatgtcat tgccttcagc attctcaacc taatcagccc acttagctac tcagtggcca
      901 atgccaccaa gaggatcatg gtcatcgctg tgtccctcat catgctgcgc aacccagtga
      961 ccagcaccaa tgtgctgggc atgatgactg ccattctggg tgtcttcctg tacaacaaga
     1021 ccaagtatga tgcgaaccag caggcccggc gccatctcct tcctgtctcc acgtcagacc
     1081 taagcaacag agagcacttg cggagcccga tggaaaagcc ccacaatggt gcactgttcc
     1141 cccagcaggg tgacttccag taccgcaata tcctcctcac ggaccacttc cagtacagcc
     1201 gccagggcca cccaaactcc tatgctctca gccgacatga tgtctaggcc aggtcaggcc
     1261 tcccgcacca ccttcttaag cccagcagct tcagaatatt ctggcagcct gactgagcac
     1321 gtgacacatg acaggccatc aggggagctc tgggtcctgg cccctgatgg gctgcaggac
     1381 gtaaccttag tatggacagc tgcaacctct gggcagaaaa aaagagccac agagagacct
     1441 ggtttgcctc cagcgagagg ctgctctgta ttcgtgcaca gggtcgctcc tggcgtattt
     1501 cagaggtctg gtctgaactt ctggtgacag tagggacaca ctctgtggaa ctgctatctc
     1561 tgtgactaca atcgtgaaag ctaacaggag gtggcatctg gggcatcatg gaaaggacag
     1621 caggtctata gcccaaaggg atggagggct gacatgggtg gcattacctg tccccgacgg
     1681 ttccagaatg ccccaaggca gttggccact tgcaactagt actgcccagg gccaaaccta
     1741 cagtgaccat cagcccatca gctgtgacct tctgctttgt gagtgccaaa gtaggacaca
     1801 gcccttggcc tcgggggtac cttggactct agaggagctg cttggctgcc ccacccttct
     1861 gatggcacag aaggccaagt ggtggcgatg acagtttcct cagaacctaa gtttctctgg
     1921 gggacattcg tcagtcatgc actatgccat ggctagtcag cgggagggag ccatgttgac
     1981 tcactttaaa ataggggata tttgttgcta gagccagtcc ctcccagctc agtggtggca
     2041 gccacaggag caagaagagg tatccacact ccaagtagag tgttgcttgt cagtgaggag
     2101 accacgtgtg tgttaggatt tgaactgtgg cccagtaaat gggacaccag gaaggccttg
     2161 gtttttttag tgaagaatca ctttgaggct gggttggtag agtgcctgcc tagagtgagt
     2221 ggggccttag cttctgttca cagaatacca catagtggta caggcctgcc atcctagcac
     2281 tttagaagca gatgcaggag gatctggagg acaaagtcct catctacata gtaagttcca
     2341 gagcagcctg ggctacaatg aaagcctgtc tcaggaaaat gatcagtgta ggaacctgtc
     2401 ttagtggtac acatctaggg gctgagtcag gaagatggcc atgagtttga agttagtcta
     2461 ggctacataa tgaggctttc tctgaaaagc acagtttagg ggttcatcct ggcagcccag
     2521 gtacttaggt actcatgaag cagaaccagc aggctttccc aagcctgtga gcatacggct
     2581 agtgtgacaa ttcaaggaaa acctgctggc aagcagaagt gtaggttgaa ggggcatcag
     2641 gctcagctgg gggtatcagt gggtctcagg gtttttggtt ttgagacagg gtctcataat
     2701 acagaccagg ctggccttga actcatggga catacctgtc tgcaacccga gtgctcggat
     2761 tctttaaaag catgggcacc acagccagat ggagtcctcc tcactaagcc tcccaggttg
     2821 acctttgatt cttagcattt gtgcctcctc cattgctaag aactgaaatg acagtcatgg
     2881 cacctcagtc cttaacttgt gattctttgt gtccctcagc ttttgattac ttgggagttt
     2941 ttatattgaa ggttagttta ttaccttagc ctcctgcttg cctgagactc ggcaacccca
     3001 gcctcgggac agtcccatct gcctcgctta ctggttttca gatgttcaga ccccgccact
     3061 gaagagtgga aaggaggacc ttcgtaaggt agtctgttgg gttttcctca cgggggaaac
     3121 ttggcttgag acacctggca ctgcagaggt ctccgtgggt gaccctgact ctgatctgga
     3181 ctcagaatga attatgtctt tttggattac caagatgttc ctgtaatttg tgtattaatg
     3241 tatttttcct tttctaggga gcaaaaaggc ctgtcttact tttcttaatg gtttataaat
     3301 taataaatgg gatatactta gttctgttaa aaaaaaaaaa aaaaa
//
