LOCUS       NM_001107748            3027 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus solute carrier family 35 member C1 (Slc35c1),
            mRNA.
ACCESSION   NM_001107748 XM_001078382 XM_230292
VERSION     NM_001107748.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Lu L, Hou X, Shi S, Korner C and Stanley P.
  TITLE     Slc35c2 promotes Notch1 fucosylation and is required for optimal
            Notch signaling in mammalian cells
  JOURNAL   J Biol Chem 285 (46), 36245-36254 (2010)
   PUBMED   20837470
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Rabionet M, van der Spoel AC, Chuang CC, von Tumpling-Radosta B,
            Litjens M, Bouwmeester D, Hellbusch CC, Korner C, Wiegandt H,
            Gorgas K, Platt FM, Grone HJ and Sandhoff R.
  TITLE     Male germ cells require polyenoic sphingolipids with complex
            glycosylation for completion of meiosis: a link to ceramide
            synthase-3
  JOURNAL   J Biol Chem 283 (19), 13357-13369 (2008)
   PUBMED   18308723
REFERENCE   3  (bases 1 to 3027)
  AUTHORS   Lubke T, Marquardt T, Etzioni A, Hartmann E, von Figura K and
            Korner C.
  TITLE     Complementation cloning identifies CDG-IIc, a new type of
            congenital disorders of glycosylation, as a GDP-fucose transporter
            deficiency
  JOURNAL   Nat Genet 28 (1), 73-76 (2001)
   PUBMED   11326280
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_230292.4, XM_001078382.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CO560880.1, CB545861.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..3027
                     /gene="Slc35c1"
                     /note="solute carrier family 35 member C1"
                     /db_xref="GeneID:311204"
                     /db_xref="RGD:1309463"
     exon            1..1031
                     /gene="Slc35c1"
                     /inference="alignment:Splign:2.1.0"
     CDS             500..1591
                     /gene="Slc35c1"
                     /note="solute carrier family 35 (GDP-fucose transporter),
                     member C1"
                     /codon_start=1
                     /product="GDP-fucose transporter 1"
                     /protein_id="NP_001101218.1"
                     /db_xref="GeneID:311204"
                     /db_xref="RGD:1309463"
                     /translation="MNRVPLKRSRILRMALTGASAVSEEADSENKPFLLRALQIALVV
                     SLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTSLLCKGLSTLATCCPGMVD
                     FPTLNLDLKVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLL
                     LKQTTSFYALLTCAIIIGGFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIYTKKV
                     LPAVDHSIWRLTFYNNVNACVLFLPLMVVLGELHALLAFAHLNSAHFWVMMTLGGLFG
                     FAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSS
                     AYTWVRGWEMQKTQEDPSSKEGEKSAIGV"
     exon            1032..3027
                     /gene="Slc35c1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttgaattca gttcgtggca gccgcggggc cttgctccgg ccaggcccct gtccgtgtcc
       61 ctcgagacgc ctcccggaac ctcggtgatc tgatccctgc cgcacgccct cccttcggct
      121 ccgcgggtgc ttccgggggc tcccgcagcc catgcctccc tctcccgctc tctcgcttct
      181 tttctccctg agactcacat gcctcctgtc gtcaagcagg ccatggctgt cagggcctac
      241 atccttagtt aggccccttc tcccttccct gggtcttgct tcatgagtcc cacccctcga
      301 ccccccaccc ccgggagaga acaagatgag gagcggtgca cctcggcaaa tccggaagca
      361 gaacttcatc caagaaggag gggaccgata ggtcacccca tgtgacaatt gaatcctgca
      421 gccacaggcc ctagcagctt gaagccctgt agtccaggga atgcttctgg cagtgaggtg
      481 acccagctct tctgccacca tgaacagggt ccctctgaag cggtccagga tcctgcgcat
      541 ggcgctgact ggagcctctg ctgtctctga ggaggcagac agcgagaaca agccatttct
      601 gctacgggct ctgcagatcg cgctggtggt ttctctctac tgggtcacct ccatctccat
      661 ggtattcctc aacaagtacc tgctggacag cccctccctg cagctggata cccccatctt
      721 cgtcaccttc taccaatgcc tggtgacctc actgctgtgc aagggcctca gcactctggc
      781 cacctgctgc cctggcatgg tagacttccc caccctaaac ctggacctca aggtggcccg
      841 aagtgtgctg ccgctgtccg tggtctttat cggcatgata accttcaata acctctgcct
      901 caagtacgtg ggggtggcct tctacaacgt gggacgctcg ctcactaccg tgttcaatgt
      961 gcttctctcc tacctgctgc ttaaacagac cacttccttt tatgccctgc tcacctgtgc
     1021 catcatcatt ggtggtttct ggctgggaat agatcaagag ggagctgagg gcaccctgtc
     1081 cctgacgggc accatcttcg gggtgctggc cagcctctgt gtctcactca atgccatcta
     1141 caccaagaag gtgctccctg ccgtagacca cagtatctgg cgcctaacct tctataacaa
     1201 cgtcaacgcc tgtgtgctct tcttgcccct gatggtagtg ctgggcgagc tccatgctct
     1261 cctggccttc gctcatctga acagcgccca cttctgggtc atgatgacgc tgggtggact
     1321 cttcggcttt gccattggct atgtgacagg actgcagatc aaattcacca gtcccctgac
     1381 ccataatgtg tcgggcacag ccaaggcctg tgcacagaca gtgctggctg tgctctacta
     1441 tgaagagatt aagagcttcc tgtggtggac aagcaacttg atggtgctgg gtggctcctc
     1501 tgcctacacc tgggtcaggg gctgggagat gcagaagacc caggaggacc ccagctccaa
     1561 agagggtgag aagagtgcta tcggggtgtg agctccttca aggacccagg gctgagctca
     1621 ggtggggcct acccagcact gcaggcttcc cacagagcca actgggtatg gccctgagca
     1681 acattgttta catcctcctc agagtatgat ctaagaggag ccaggttctt tcctggtaat
     1741 gtctgaaagc tgccaaatct cttatctgcc cccatcttct tgtcttggga aagccctact
     1801 gggagtggca cccttcctgc cttctcctgg ggcctgacta cctccatatc gcctctgggg
     1861 ttgggtccag ctgcagtctt tggggacggg actgatgaag tgatgtctta ctttctacac
     1921 aagggagatg ggttgtgacc ctactataac tagttgaagg gagctgggtg accccccaca
     1981 tctctgcggc cctgggcagg tagcataata ggtcaggtgc tattaacatc agtaacactc
     2041 cagactagct ttggaggccc ttgggagctg aaccaagcaa gagaggaaat ggccattctg
     2101 ctctcttctg tgtggatggg tatgacaggc caactgtcca tgggaactgc acccagggtg
     2161 gctgagaaaa cactcacctt tgtactctat atttgcagct ttaaacagag ggagccacga
     2221 gttttacaca ttaagtagag agatgaatgc ctccacagcc cctaacccca gcttttcctg
     2281 cctgacttct cttggtccag aggggtcacc atcctgttct ccaacacctg gcccagctac
     2341 atggctgtcc cctctttctg tactcccttt ttccccatca gcctacccca atgcctctat
     2401 ctgcaggcag gaagaggggt ccactcatag cctctgttcc catgtgcttg gacccccgag
     2461 cccttcgtga cgtaagagac acttaccttc tctgaggctg gagctgaaag ggcccactga
     2521 ttctctgagt tagcccatca ggctcctgtc acaagacagc ctacacccgt gtggctaaga
     2581 acagtggagg ttggtttata agtccacata aacccagtgt ttcagaggaa acccctctgt
     2641 tcacattctc acatggtaga ggcacagata aaatccctcg ggcctcttat acaggagtac
     2701 tagccccatt catgagggct ccaccccatg acctaatcac ccccaaagcc ttcaacatac
     2761 ggactcccac atgaatttgg ggacagaagt accggaccat gataccccag caccacaccc
     2821 tcctaacctc agggtagctg tcactgttct agtcccttct gtttggcctt ttttaccccc
     2881 atgtccttgg ggtaatgttt gatgtctttg tccctttcat gaaaagatgg ggaaactgtg
     2941 tttgcctttg atttctactt cccacaggtt ctaatgaagt tggtggggcc tgctggcctg
     3001 agttgtatgt gatttaataa aacaaac
//
