LOCUS       NM_001106590            3622 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus solute carrier family 35 member B4 (Slc35b4),
            mRNA.
ACCESSION   NM_001106590 XM_001064074 XM_216122
VERSION     NM_001106590.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Yazbek SN, Buchner DA, Geisinger JM, Burrage LC, Spiezio SH,
            Zentner GE, Hsieh CW, Scacheri PC, Croniger CM and Nadeau JH.
  TITLE     Deep congenic analysis identifies many strong, context-dependent
            QTLs, one of which, Slc35b4, regulates obesity and glucose
            homeostasis
  JOURNAL   Genome Res 21 (7), 1065-1073 (2011)
   PUBMED   21507882
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Maszczak-Seneczko D, Olczak T and Olczak M.
  TITLE     Subcellular localization of UDP-GlcNAc, UDP-Gal and SLC35B4
            transporters
  JOURNAL   Acta Biochim Pol 58 (3), 413-419 (2011)
   PUBMED   21918738
REFERENCE   3  (bases 1 to 3622)
  AUTHORS   Ashikov A, Routier F, Fuhlrott J, Helmus Y, Wild M, Gerardy-Schahn
            R and Bakker H.
  TITLE     The human solute carrier gene SLC35B4 encodes a bifunctional
            nucleotide sugar transporter with specificity for UDP-xylose and
            UDP-N-acetylglucosamine
  JOURNAL   J Biol Chem 280 (29), 27230-27235 (2005)
   PUBMED   15911612
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473959.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_216122.4, XM_001064074.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..3622
                     /gene="Slc35b4"
                     /note="solute carrier family 35 member B4"
                     /db_xref="GeneID:296969"
                     /db_xref="RGD:1308985"
     exon            1..295
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     CDS             219..1214
                     /gene="Slc35b4"
                     /note="UDP-xylose and UDP-N-acetylglucosamine transporter;
                     solute carrier family 35
                     (UDP-xylose/UDP-N-acetylglucosamine transporter), member
                     B4"
                     /codon_start=1
                     /product="nucleotide sugar transporter SLC35B4"
                     /protein_id="NP_001100060.1"
                     /db_xref="GeneID:296969"
                     /db_xref="RGD:1308985"
                     /translation="MRPAFAVGLVFAGCCSNVIFLELLARTHPGCGNIVTFAQFLFIA
                     VEGFLFEADLGRKPPAIPIRYYAIMVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLI
                     ANMILGIIILKKRYSMFKYTSIALVSAGIFICTFMSAKQVTVQSSLSDKDGFQAFAWW
                     LLGIGALTFALLMSARMGIFQETLYRQFGKHSKEALFYNHALPLPGFIFLASDIYDHV
                     VLFNKSELYQVPVLGVTVPIMWFYLLMNVVTQYVCIRGVFILTTECSSLTVTLVVTLR
                     KFVSLIFSILYFQNQFTLWHWLGTVFVFTGTLMYTEVWKNLGATKSQLQKDDKKD"
     exon            296..409
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            410..512
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            513..562
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            563..644
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            645..705
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            706..815
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            816..891
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            892..967
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
     exon            968..3622
                     /gene="Slc35b4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccttggac agcccctcaa atgaatggga ctgggtaaaa ttgagaacta cagctccttg
       61 tctggccgcg tctgtagcag ccgcagagga agagttgatc aagaaggtcc tcagagaggg
      121 aactgctggc cgtggtgatg ttgcgcgcgg gttttctagg gtagcgatct ggaagggcgc
      181 tttttctgcg cgctggctcc ccgtgccccg caccggccat gcgcccggcc ttcgcggtgg
      241 gcctggtgtt cgcaggctgc tgcagtaatg tgatcttcct agagttgctg gcccgcacac
      301 atccaggatg cgggaacatc gtcacgtttg cccagttctt atttattgct gtggaaggct
      361 tcctttttga agctgacttg ggaaggaagc caccagctat cccaataagg tactatgcca
      421 tcatggtgac catgttcttc acggtcagcg tagtgaacaa ctatgccctg aacctgaaca
      481 tcgccatgcc actccacatg atcttcagat cgggctctct gattgccaac atgattctag
      541 gaattatcat tttgaagaaa agatacagta tgttcaagta tacctccatt gccctggtgt
      601 ctgcggggat atttatttgc actttcatgt cagcaaagca ggtgaccgtc cagtccagct
      661 tgagtgacaa ggatggattc caggcatttg catggtggtt actaggtatt ggagcactga
      721 cctttgctct gctgatgtcg gcaaggatgg gcatattcca agagactctg tacagacagt
      781 tcgggaaaca ctcgaaggag gcactgtttt ataatcatgc ccttccactt cccggtttca
      841 tcttcttggc ctctgatatt tacgaccacg tcgttctgtt caataagtct gagctctatc
      901 aagttccagt cctcggagtg actgtgccca tcatgtggtt ctacctcctc atgaatgtcg
      961 tgactcaata cgtgtgcatc cggggtgtgt tcatccttac cacagagtgc agctccctca
     1021 ccgtcacact ggtcgtgact ctgcgaaagt tcgtgagcct catcttttct atcctgtact
     1081 tccagaacca gttcaccctg tggcactggc tgggcactgt gtttgtcttc accgggacct
     1141 taatgtacac agaggtgtgg aaaaacctag gggccacaaa aagtcagctg caaaaggacg
     1201 acaagaagga ctgaggtctg cccggacaga cagtcgctgt tatgtgagag tggcctcggc
     1261 tgcaggtctg gccatcattt cacctgggct gaagccaaat taccacagta ttgaagcaga
     1321 gcttcttctg acaggatggg atggcagcat ttgtagactc cacgtaggca tccctgagat
     1381 agaataaaca gaacaaacaa ggcttccagg cagactgtcg ggaagcttcc gcatttgctt
     1441 ttcactctca gagcttgtag ttctctacct gtgttgcact tgttgctacc gatgattctt
     1501 tgctgtgaca gcctatgtac ctctctcctc ccatcaccct ccacactgca gcactttgca
     1561 gcgcagtcag tgctccaggc acagtcaggc cctgaacaat ccagtggacg ggtgatacat
     1621 tagaccccag gaatgaggct ggactccctc cagtgtggtg agagagaagc agttgacccc
     1681 aggagcacag cccttgagat acgtgagctg gacattggtg atgctttctg tagtagagca
     1741 gtcctgcagc catccttgca cagtagacag gaaaaaaact cggaagtgga tcgagaagag
     1801 ggaggccttt ccagccatct cccacgtgaa gccccttggc ctgttaggga gatggagaag
     1861 gaaacatggc caatacagct cactctttca gcaccctgag agactattgc ccctgggaac
     1921 ctggccacac attcacatgg gtttcagacg tgtgtctgtg agaggtatta gggcctggta
     1981 accaggcctg agaattatca tcggtcaagt catcgatgat tgattgattg attgattgat
     2041 acacaggtgt gagagtggtc aaagcccagc tgccacagag tggagtctta ttttcccatt
     2101 gatatggggc tgcttttggt gggtgtgcat gagaggtggc atgagacaac atgtttacat
     2161 acagaaacag gcctgcctct tctgctgatc attctgaagg tccgagtttc ctctcctgga
     2221 tcctcttgag gaagagtaac cctgttgcat agcaaatggt gcttgtgtgc cctcagctgg
     2281 attgtatgtg attgaagagc aagggctcca tgttggttca tttcctcttt tcttctctca
     2341 gagccaaacc ctcattaccc tcacctagcc atctgctcct ctgcaaacag ctaaactcac
     2401 tgactctctc acgcatgaac agcagccttc cattctatcg ctatgtgtac actatgctct
     2461 tacactgaga tgcggctctc cgtgtctcct tggctcactt gtagtttttt gttcctgcat
     2521 ctgaagatgc tctttgatgg gtctgaacag cagagagaac tgaacagcag agagaactgt
     2581 cctaaccctc tgggtgccct gggaaggcag ttaaaacgac tttactttgt gttacattaa
     2641 atgcagatgc tttctccacc taagtcctcg tttacagact gaatcattct ggccattgac
     2701 accgtcccag tgctggaaat gggctgttcc tcaaagatgc tgaattagat ggagcccatt
     2761 cgcaatccta gaagctcctt agctactttg aaatatgtgt ggttgcctgg accaatgttg
     2821 ctataaatac caagtgttaa atgtcccctt aaaaagacag taataaaaag tacttttttc
     2881 cttcctgtta acagaagaat ctgtccctag gggctcttga ggctcaattc cgattactcc
     2941 tgaaggctgt agcctttagt tagccagtgc ttcccttttt acactggaga agtaccgcac
     3001 agctcgcagt tcagacacta ctggctctaa ccccttaggg tttcagatcg tgtagccctt
     3061 tgccggtttt attgaaggag atgcaggagc aggtcagagt cagaactcac aacaaaatgt
     3121 tcacctgcgg gaacagagca caggaaatgc tctgtgagca ctgctggctc aggcacaagc
     3181 aagtgcccca gctgcttcct cccatgctgt agataaaagg cagtgtatct aacagacaat
     3241 agttacgatt ttgttacgct attctaaagg ttctgttttc attttagttg tgtatcttca
     3301 ttacacaggg ccctgaggtt gaacattttc ctacagttga gtacatctgc catgctctgt
     3361 cttctgacac tctcctacag ttgggtatgt cccccacact ctcttctccc cttgctctcc
     3421 acctgtcagg cctgttgttc ccttgaacag tttggcttct accttccgat cacatacaca
     3481 ccatgatttt atgtctctac agagtccagg aactacaaac aagagtacat agatggtgtt
     3541 tgtcttccct ccactagctt aatctcctaa taggaccatc tctggataca tcatgaaatc
     3601 atctttataa aagtcattcc tc
//
