LOCUS       NM_001107346            1893 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 35 member B3 (Slc35b3),
            mRNA.
ACCESSION   NM_001107346 XM_003751664
VERSION     NM_001107346.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jan 26, 2022 this sequence version replaced XM_003751664.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.52086.1,
                                           SRR26643293.71611.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-99                JAXUCZ010000017.1  26052453-26052551
            100-381             JAXUCZ010000017.1  26057037-26057318
            382-503             JAXUCZ010000017.1  26058607-26058728
            504-658             JAXUCZ010000017.1  26066700-26066854
            659-766             JAXUCZ010000017.1  26068174-26068281
            767-864             JAXUCZ010000017.1  26071183-26071280
            865-957             JAXUCZ010000017.1  26072871-26072963
            958-1069            JAXUCZ010000017.1  26073343-26073454
            1070-1139           JAXUCZ010000017.1  26075916-26075985
            1140-1893           JAXUCZ010000017.1  26077933-26078686
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..1893
                     /gene="Slc35b3"
                     /note="solute carrier family 35 member B3"
                     /db_xref="GeneID:306866"
                     /db_xref="RGD:1307183"
     exon            1..99
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            100..381
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     CDS             181..1290
                     /gene="Slc35b3"
                     /note="solute carrier family 35 (adenosine 3'-phospho
                     5'-phosphosulfate transporter), member B3"
                     /codon_start=1
                     /product="adenosine 3'-phospho 5'-phosphosulfate
                     transporter 2"
                     /protein_id="NP_001100816.1"
                     /db_xref="GeneID:306866"
                     /db_xref="RGD:1307183"
                     /translation="MDLKFNNSRKYVSITVPSKTQTMSPHIKSVEDVVVLGVNLSRFK
                     KLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSVFGLIELQLT
                     QDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQG
                     KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQEKAM
                     KLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLFSLTGY
                     FGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQYIWSGLLVVLGIFL
                     NVYSKNMDKIRLPSVYSVIKKAMDMKKSRTLAQTV"
     exon            382..503
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            504..658
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            659..766
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            767..864
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            865..957
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            958..1069
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            1070..1139
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
     exon            1140..1893
                     /gene="Slc35b3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtggcgcga ggtgtccggc ctgtggagac cttccgggaa ggtggcggcc gaggtggcgg
       61 tcgagagagc aggaccggag acaggtggat gcggaggagg cccagccagc aagacggggc
      121 ccagcagtgg agaagagcag agacaaggtt gcaggccttg aatgcggcaa agcagaaacc
      181 atggacctca agttcaacaa ctccaggaag tatgtctcca tcactgtgcc ctccaaaacc
      241 cagacaatgt cgccacacat caagtcggtt gaggacgtcg tggtgctggg cgtgaacctc
      301 agcaggttta agaagctcac acagtttctc atatgtgtgg ctggagtttt tgtgttttac
      361 ctaatttatg gatacttaca ggagttgata ttttcaatgg aaggctttaa gccttacggc
      421 tggtacctta ctttagtaca gtttgcattt tactctgtat ttggcctaat agaactccag
      481 ctcactcagg acaaaaggag aagaatacca ggaaaaacct acatgataat agcttttcta
      541 actgtgggta ctatgggctt atcaaacact tccttgggct acctgaatta cccaacccaa
      601 gtcatcttca agtgctgcaa actgattcct gttatgctag gaggagtttt tattcaagga
      661 aagaggtaca accttgcaga cgtgtccgct gcagtgtgca tgagccttgg cctgatctgg
      721 tttacccttg ctgacagcac aattgcacca aactttaatc tgacaggtgt gatgcttatc
      781 tccctggcac tgtgtgcaga tgctgtcatt gggaacgttc aggagaaagc tatgaaactg
      841 cacaatgctt ccaactccga gatggttttg tattcgtact caatcggttt tgtgtacatt
      901 ctgttgggat tgtcatgcac cagtggactg ggtcctgcac tggcattttg ttcaaagaac
      961 cctgttcgga cttatggcta tgccttcctg ttttccctca ctggttactt tggaatctcc
     1021 tttgttctgg ccctcattaa aatctttggt gctcttctgg ctgtaacagt gacaacagga
     1081 cgaaaagcaa tgaccatcgt cctgtccttt ctgttctttg ctaagccatt cacatttcag
     1141 tatatatggt ctggcttgct agttgtcctt ggcatatttc tgaatgttta cagcaaaaat
     1201 atggataaaa taagattgcc ctcggtgtac agtgtgataa agaaagccat ggacatgaaa
     1261 aagtcaagaa cgttggcaca gactgtgtag gaactgtgtt cgcctatgta aaataaaagt
     1321 ctgagggaac aatcattaat caactcactt tccaaaggct tgtggtaaaa ccaaaggatc
     1381 tgaaggctgc tgtcgtctga gcaggtcgta ctctcggtgg ttcctcggca tctgcctcta
     1441 cagaacacac acttttgatc agctccaaaa cgatcaagag cccacaccta ggacattttg
     1501 caataaagtc agtatgaagg aaagtgcttc ctagctgtcc tgaacatttc actggaagtg
     1561 gaccgtgttg caagactgat tggcaatccg tccggcctgc agcacggtgc cgtgtagtag
     1621 cactgtttgt ctccattccg tttcggtggt gttatttaaa ttcttctctg ttataagagt
     1681 aactgatgat ttgaagttta gagaaaatag cattcattta taaataaaat tatcctgtga
     1741 ttttttttaa atggcgtttt aataaaattt gttattgagg agaatggaga caggaagaag
     1801 ggctaatgta cactttaaaa catgggtttt taaagttcag agaaaatagc attcatttat
     1861 aaataaagtt atcctgtgat ttttttaaaa aaa
//
