LOCUS       NM_001127642            1465 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 35 member A2 (Slc35a2),
            mRNA.
ACCESSION   NM_001127642 XM_006256693
VERSION     NM_001127642.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Maszczak-Seneczko,D., Olczak,T. and Olczak,M.
  TITLE     Subcellular localization of UDP-GlcNAc, UDP-Gal and SLC35B4
            transporters
  JOURNAL   Acta Biochim Pol 58 (3), 413-419 (2011)
   PUBMED   21918738
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Ishida,N., Yoshioka,S., Iida,M., Sudo,K., Miura,N., Aoki,K. and
            Kawakita,M.
  TITLE     Indispensability of transmembrane domains of Golgi UDP-galactose
            transporter as revealed by analysis of genetic defects in
            UDP-galactose transporter-deficient murine had-1 mutant cell lines
            and construction of deletion mutants
  JOURNAL   J Biochem 126 (6), 1107-1117 (1999)
   PUBMED   10578063
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On or before Apr 13, 2021 this sequence version replaced
            XM_006256693.4, NM_001127642.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643284.21235.1,
                                           SRR26643298.31168.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840115 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-118               JAXUCZ010000021.1  17288496-17288613   c
            119-301             JAXUCZ010000021.1  17287011-17287193   c
            302-453             JAXUCZ010000021.1  17284445-17284596   c
            454-1187            JAXUCZ010000021.1  17281658-17282391   c
            1188-1465           JAXUCZ010000021.1  17280076-17280353   c
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq12"
     gene            1..1465
                     /gene="Slc35a2"
                     /note="solute carrier family 35 member A2"
                     /db_xref="GeneID:100158233"
                     /db_xref="RGD:2293497"
     exon            1..118
                     /gene="Slc35a2"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..1215
                     /gene="Slc35a2"
                     /note="solute carrier family 35 (UDP-galactose
                     transporter), member A2"
                     /codon_start=1
                     /product="UDP-galactose translocator"
                     /protein_id="NP_001121114.2"
                     /db_xref="GeneID:100158233"
                     /db_xref="RGD:2293497"
                     /translation="MAAVGVGGSTAAAGAGAVSAGALEPGSATAAHRRLKYISLAVLV
                     VQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLH
                     EAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLML
                     NRSLSRLQWASLLLLFTGVAIVQAQQAGGSGPRPLDQNPGVGLAAVVASCLSSGFAGV
                     YFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVASQGFFFGYTPAVWGVVL
                     NQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHLDPLFALGAGLVIGA
                     VYLYSLPRGAVKAIASASASASGPCIHQQPPGQPPPPQLSSRGDLITEPFLPKLLTKV
                     KGS"
     exon            119..301
                     /gene="Slc35a2"
                     /inference="alignment:Splign:2.1.0"
     exon            302..453
                     /gene="Slc35a2"
                     /inference="alignment:Splign:2.1.0"
     exon            454..1187
                     /gene="Slc35a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1188..1465
                     /gene="Slc35a2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggggacgg aacgggcaga tgccaacatg gcagcggttg gggttggcgg atctaccgct
       61 gcggccgggg caggggctgt gtccgcgggc gcgttggaac ctggatctgc tacagcggct
      121 caccggcgcc tcaagtatat atccttagct gtgctggtgg tccagaatgc ctccctcatc
      181 ctcagcatcc gctatgctcg cacactgcct ggggaccgct tctttgccac cactgctgtg
      241 gtcatggctg aagtgctcaa aggtctcacc tgtctcctgc tgctcttcgc acaaaagagg
      301 gggaatgtga agcacctggt cctcttcctt cacgaggctg tcctggtgca atatgtcgac
      361 acactgaagc tcgcggtgcc ctctctcatc tataccttgc agaataacct ccagtatgtt
      421 gccatctcca acctgccagc tgccactttc caggtgacgt atcagctgaa gatcctgact
      481 acagcactgt tctcggtgct tatgttgaat cgcagcctct cacgcctgca gtgggcctct
      541 ctgctactgc tcttcactgg tgtcgccatt gtccaggcac agcaagctgg tgggagtggc
      601 ccacggccac tggatcagaa cccgggggtg ggcttagcag ctgttgtggc ctcctgtctc
      661 tcctcaggct ttgctggtgt ctactttgag aagatcctca aaggcagctc aggttctgtg
      721 tggctgcgca acctccagct cggcctcttt ggcacagcgc tgggcctggt ggggctctgg
      781 tgggctgagg gcactgccgt ggccagtcaa ggcttcttct ttgggtacac acctgctgtc
      841 tggggtgtcg tactaaacca agccttcggt gggctcctgg tggctgttgt tgtcaagtat
      901 gctgacaaca tcctcaaggg ctttgccacc tccctgtcca ttgtgctgtc cactgttgcc
      961 tccattcgcc tctttggctt ccacctggac ccattatttg ccctgggtgc agggctcgtc
     1021 attggtgccg tctacctcta cagccttccc cgaggtgcag tcaaagccat agcctctgcc
     1081 tctgcctctg cctctgggcc gtgcattcac cagcagcctc ctgggcagcc accaccaccg
     1141 cagctgtctt cccgaggaga cctcatcacg gagccctttc tgccaaagtt gctcaccaag
     1201 gtgaagggct cgtagctgct ggaattgaag acgctggcct gccttcgttc tcccttcttg
     1261 ccctggccca gctgggacta aactcttatc agtattaggg gtagggtgag gtagacatgg
     1321 aactaactcc ctgtccccac caaccctgcc ccacgtaggg ctgacatgac tgactaacct
     1381 ctgttaatgg gcccacctca actcctgcta tctttacagt atttcttagg tgagtttctg
     1441 caaataaaat gtgttttgca tcttg
//
