LOCUS       NM_001109088            1778 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus solute carrier family 30 member 9 (Slc30a9),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001109088 XM_001057251 XM_001070327
VERSION     NM_001109088.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Yu,G., Zhu,Y., Song,C., Chen,L., Tang,Z. and Wu,T.
  TITLE     The ZIP9-centered androgen pathway compensates for the 2605 MHz
            radiofrequency electromagnetic radiation-mediated reduction in
            resistance to H2O2 damage in Sertoli cells of adult rats
  JOURNAL   Ecotoxicol Environ Saf 254, 114733 (2023)
   PUBMED   36889209
  REMARK    GeneRIF: The ZIP9-centered androgen pathway compensates for the
            2605 MHz radiofrequency electromagnetic radiation-mediated
            reduction in resistance to H2O2 damage in Sertoli cells of adult
            rats.
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   3  (bases 1 to 1778)
  AUTHORS   Perez,Y., Shorer,Z., Liani-Leibson,K., Chabosseau,P., Kadir,R.,
            Volodarsky,M., Halperin,D., Barber-Zucker,S., Shalev,H.,
            Schreiber,R., Gradstein,L., Gurevich,E., Zarivach,R., Rutter,G.A.,
            Landau,D. and Birk,O.S.
  TITLE     SLC30A9 mutation affecting intracellular zinc homeostasis causes a
            novel cerebro-renal syndrome
  JOURNAL   Brain 140 (4), 928-939 (2017)
   PUBMED   28334855
REFERENCE   4  (bases 1 to 1778)
  AUTHORS   Chen,Y.H., Kim,J.H. and Stallcup,M.R.
  TITLE     GAC63, a GRIP1-dependent nuclear receptor coactivator
  JOURNAL   Mol Cell Biol 25 (14), 5965-5972 (2005)
   PUBMED   15988012
REFERENCE   5  (bases 1 to 1778)
  AUTHORS   Sim,D.L. and Chow,V.T.
  TITLE     The novel human HUEL (C4orf1) gene maps to chromosome 4p12-p13 and
            encodes a nuclear protein containing the nuclear receptor
            interaction motif
  JOURNAL   Genomics 59 (2), 224-233 (1999)
   PUBMED   10409434
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473981.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001070327.1, XM_001057251.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p11"
     gene            1..1778
                     /gene="Slc30a9"
                     /note="solute carrier family 30 member 9"
                     /db_xref="GeneID:498358"
                     /db_xref="RGD:1593180"
     exon            1..177
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..1778
                     /gene="Slc30a9"
                     /note="zinc transporter 9; solute carrier family 30 (zinc
                     transporter), member 9"
                     /codon_start=1
                     /product="proton-coupled zinc antiporter SLC30A9,
                     mitochondrial"
                     /protein_id="NP_001102558.1"
                     /db_xref="GeneID:498358"
                     /db_xref="RGD:1593180"
                     /translation="MFPGLAAAAAAHRCSWAALCRLGGGPAVARGRSQGWKNLMTFES
                     FTSMIPSIHPQISVLNQVKLYSTNVQKGGQGSQTPRTDKAPPLTQAAENIGAELKAPL
                     KQDPLQVRVKAVLKKREYGSKYTKNNFITGVRAINEFCLKSSDLEQLRKIRRRSPHDD
                     TESFTVFLRSDVEAKALEVWGSLEALAREKKLRKEAEIEYRERLFRNQRILREYGDFL
                     GNTKPRSRAISVFLKGPGKVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDT
                     CNQGLLALGISKSVQTPDPSHPYGFSNMRYISSLISGVGIFMMGAGLSWYHGIMGLLH
                     PQPMESLLWAYCILAGSLVSEGATLLVAINELRRSAQANGTSFYKYVMESRDPSTNVI
                     LLEDTAAVLGVMIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLISTNIEALLG
                     RSIQPEQVQRLTELLESDPSVRAIHDVKATDLGLGKVRFKAEVDFDGRVVTRSYLEKQ
                     DFDQMMQEIEEVKTPEQLEAFMLKHGENIIDTLGAEVDRLEKELKKRNPEVRHVDLEI
                     L"
     exon            178..345
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            346..405
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            406..505
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            506..598
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            599..681
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            682..740
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            741..808
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            809..911
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            912..967
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            968..1103
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1104..1143
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1215
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1216..1323
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1324..1489
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1490..1619
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1620..1733
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1734..1778
                     /gene="Slc30a9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagtcag ttggcacggc aggtagctcg gaggcaggag gcggtgaccg agttggggcc
       61 tctgccccgc caggatgttt ccgggcttgg ccgccgccgc tgcggcgcac aggtgcagct
      121 gggcggcgct gtgcaggctc ggtggcggcc cggcagtagc ccgcggccgc agccagggat
      181 ggaagaattt aatgacattt gaaagcttta cgtccatgat tcccagcatt cacccgcaaa
      241 tatctgttct aaatcaagtc aagttgtact ctacaaatgt ccagaaagga gggcagggct
      301 cacaaactcc gagaactgac aaagccccac cgcttacgca agcagcagaa aatataggtg
      361 cagaactcaa agctccactt aagcaagatc ctctccaagt cagagtcaaa gcagtcctta
      421 agaaaaggga gtatggatca aaatacacta agaataattt catcactgga gtaagagcaa
      481 tcaatgagtt ctgccttaag tccagtgatt tagaacaact tcgaaaaatc aggcgacgaa
      541 gtccccacga tgacactgag tcctttactg tgttcttgag gtcagatgtg gaagcaaaag
      601 ctctggaagt ttggggaagc cttgaagctc ttgccagaga gaaaaaattg cgtaaagaag
      661 cagagataga atacagagaa cggctgttta gaaaccaaag aatactaaga gaatatggtg
      721 atttcttggg aaacacaaag ccacgctcca gagcgatctc agtgttcctt aagggaccag
      781 gaaaggtggt gatggtcgct atttgcatta atggcttaaa ctgcttcttt aaatttcttg
      841 cctggattta tacgggttca gcaagtatgt tctcagaagc tatacattca ttatctgata
      901 cttgtaacca gggtttgcta gcactgggca tcagcaagtc tgttcaaaca ccagatcctt
      961 ctcacccgta tggcttttca aatatgcgct atatttcttc attgattagt ggtgttggta
     1021 ttttcatgat gggcgcagga ctctcttggt atcatggaat catgggattg cttcatcctc
     1081 aaccaatgga atcccttcta tgggcatatt gtattttagc aggatctttg gtgtctgaag
     1141 gagcaacact tctcgttgcc ataaatgaac ttcgcaggag cgctcaagcg aatgggacat
     1201 cattttataa gtatgtcatg gagagtcgtg atccgagtac aaatgttatt ctattggagg
     1261 acactgcggc tgtcctagga gtgatgatag cagctacctg catgggcctt acctccataa
     1321 caggcaatcc attgtatgac agcctgggtt ccttgggtgt aggcacctta ctaggtgtgg
     1381 tctcggcatt cctcatctct accaacatag aagcactcct aggacgatcc atccaaccag
     1441 agcaagtaca gcggcttacc gaacttctgg agagcgaccc atcagtaagg gcaatccatg
     1501 atgtcaaagc cacagacctg ggattaggga aagtcagatt taaggcagaa gttgattttg
     1561 atggacgtgt tgttacaaga tcatatttgg aaaagcaaga ttttgaccaa atgatgcaag
     1621 agatcgaaga agtgaaaact cctgaacaat tagaagcctt tatgcttaaa catggagaaa
     1681 atattattga tactctagga gctgaagtag acaggcttga gaaagagctg aaaaaacgaa
     1741 accctgaagt tcggcacgtg gatcttgaga tcttatag
//
