LOCUS       NM_001106145            2603 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus solute carrier family 27 member 6 (Slc27a6),
            mRNA.
ACCESSION   NM_001106145 XM_001060439 XM_225919
VERSION     NM_001106145.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   DiRusso CC, Darwis D, Obermeyer T and Black PN.
  TITLE     Functional domains of the fatty acid transport proteins: studies
            using protein chimeras
  JOURNAL   Biochim Biophys Acta 1781 (3), 135-143 (2008)
   PUBMED   18258213
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Heather LC, Cole MA, Lygate CA, Evans RD, Stuckey DJ, Murray AJ,
            Neubauer S and Clarke K.
  TITLE     Fatty acid transporter levels and palmitate oxidation rate
            correlate with ejection fraction in the infarcted rat heart
  JOURNAL   Cardiovasc Res 72 (3), 430-437 (2006)
   PUBMED   17034771
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473971.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001060439.1, XM_225919.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..2603
                     /gene="Slc27a6"
                     /note="solute carrier family 27 member 6"
                     /db_xref="GeneID:291582"
                     /db_xref="RGD:1311977"
     exon            1..703
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     CDS             223..2082
                     /gene="Slc27a6"
                     /EC_number="6.2.1.15"
                     /note="solute carrier family 27 (fatty acid transporter),
                     member 6; long-chain fatty acid transport protein 6-like"
                     /codon_start=1
                     /product="long-chain fatty acid transport protein 6"
                     /protein_id="NP_001099615.1"
                     /db_xref="GeneID:291582"
                     /db_xref="RGD:1311977"
                     /translation="MLLSWLTGFGAGLLSLHFVQKLLFPYFWDDLWFLLKLVRYGIQM
                     EIYKLRGELVTVLDKFLSHARRQPKKAFIIYEGDVYTYEDVDKRSNRVAHALLNHSDL
                     KRGDVVALLMSNEPDFVHVWFGLAKLGCVVAFLNSNLRFESLLHCIRTSEPKAMVVGE
                     DLLGSLEEILPSLPKHIRVWGMKDSVPEGIVSLKEKLSLASDEPVPPSHHVTSSLKST
                     CLYIFTSGTTGLPKAAVISQFQVLKGSFGLWAFGCTADDIVYITLPLYHSSGALLGIG
                     GCVELGATCVLKKKFSASQFWNDCRKYNVTVFQYIGELCRYLCKQPQREGEKDHRVRL
                     AVGNGMSSDVWRQFLDRFGNIKMCEFYGATEGNICFMNHTGKIGSVGRVNFFYNLLFS
                     FELIKYDFQKDEPLRNEQGWCYCVRKGEPGLLVSRVNKKNPFFGYTGSYKQTKSKLLF
                     DVFKKGDVYFNTGDLMFQDHENFLYFWDRIGDTFRWKGENVATTEVANVLGRLDFIQE
                     ANVYGVPVPGYEGKAGMTSIILKPNKSLDLEKMYDQVVTSLPAYACPRFLRIQDKMET
                     TGTFKLKKLQLVEEGFNPLKIADPLYFMDNLKKSYVPLTQEIYNQVMLEELKL"
     exon            704..907
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            908..1066
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            1067..1191
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            1192..1386
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            1387..1477
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            1478..1676
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            1677..1774
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            1775..1905
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
     exon            1906..2603
                     /gene="Slc27a6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcctcgtcca gtgccccagg ccttatcacc agcactctgt gagctttctg ggtgaaaact
       61 tttgatttct ttcacgggat acacaaagaa atcttgggac agaactgcag gtgccagcct
      121 gagttgtcag gacaggagtc cccagggcaa aagaactgaa gctcttggaa aaggaagaga
      181 cactggtagg acccatccgg tcagctggag ttctgggcgc ccatgcttct gtcatggctc
      241 acaggatttg gggctggact gctctccctc cacttcgtgc agaaacttct gttcccgtac
      301 ttctgggatg acttgtggtt cttgctgaag ttggtgcggt atggaattca gatggagata
      361 tacaaactga ggggtgagct ggtcacggtg ctggataagt tcctgagcca tgccaggagg
      421 cagccaaaga aagccttcat catctatgag ggggatgtgt acacctatga ggatgtggac
      481 aagaggagca acagagtagc ccacgccctc ctgaaccact ccgacctgaa aaggggggac
      541 gttgtagctt tgttgatgag taacgagccc gacttcgttc atgtgtggtt tggcctggct
      601 aagctgggct gcgtggtggc cttcctcaac tccaaccttc gcttcgagtc cctcctacat
      661 tgcatccgta ccagtgaacc caaagccatg gtggtgggcg aagatttgct tggaagccta
      721 gaagaaatcc ttcccagcct cccgaaacat atcagggttt ggggaatgaa ggattctgtt
      781 ccagaaggta tagtttcact caaagaaaag ctgagccttg cctctgatga gccagtacca
      841 ccaagccatc acgtcacctc aagccttaag tctacttgcc tctacatttt tacctctgga
      901 acaacaggtc tacccaaagc agctgtgatt agccagttcc aagtgttgaa gggatctttt
      961 gggctatggg cgtttggctg tacagctgat gacattgttt atataaccct ccctctgtac
     1021 catagctcag gggctctcct tggaattggt ggatgtgttg agttgggtgc cacgtgtgtg
     1081 ctaaagaaga aattctctgc gagccagttt tggaatgatt gcaggaagta caacgtgact
     1141 gtgtttcagt acatcgggga gctttgccgt tatctgtgta aacaacctca gagagaaggg
     1201 gaaaaggacc atcgggtgcg tttggcagtt ggaaacggta tgagtagtga tgtgtggaga
     1261 caatttttag acagatttgg aaacattaag atgtgtgaat tttacggagc taccgaagga
     1321 aacatatgtt tcatgaacca cactgggaag attggatctg tcgggagagt gaacttcttc
     1381 tacaatcttc ttttctcctt tgagttgata aagtatgact ttcagaagga tgaaccattg
     1441 aggaacgaac aaggctggtg ctactgtgtg agaaaaggag aacctggtct ccttgtttcc
     1501 cgtgtgaaca agaagaatcc tttctttggc tatactggct catacaagca aacgaaaagc
     1561 aagttgcttt ttgatgtttt taagaagggg gatgtttact tcaacacagg agacctaatg
     1621 ttccaagatc atgagaactt cctttatttt tgggaccgta ttggagacac tttcaggtgg
     1681 aaaggagaaa atgtcgcaac cacagaggtg gccaatgtgc ttggaaggtt ggactttata
     1741 caggaagcaa acgtgtacgg tgtgcccgtg ccaggttatg aaggaaaagc tggaatgact
     1801 tccattattc taaaaccaaa caagtcttta gacttagaaa aaatgtatga ccaagtggtg
     1861 acatcactac cagcttatgc ctgcccacgg tttctaagaa ttcaggacaa aatggagaca
     1921 acagggacat tcaagctaaa gaagttgcag ctggtggaag aaggatttaa tccgctgaag
     1981 attgctgacc cactttactt tatggataac ttgaagaaat cttatgttcc attgacccaa
     2041 gagatttata atcaggtaat gttagaggag cttaagcttt aagaccatat ttatgggact
     2101 tcgatggcct cctgggaaag gtgaaggaag atttatgagc ttctttgcag acagtcaggg
     2161 aggagttcct atcataaatc aatcatacat tggaaaaaat tgtacatgaa gaatgcattt
     2221 tgtataccca agctttcaag gcccacactt ctcagcacag tgagctataa agtaggggct
     2281 gtttacctta tggtcttgag gctgatttga ggatgctgct cactgcccag aatcaccaga
     2341 aagaagtgta cttcatcgca tgagcccaga agtaggctac agtttaaaga acagtgattt
     2401 ctgaatgcgt ttgggaagta aaaccaaaca agacatagta ttaccacctg actctgggac
     2461 cgtcagaaat gtgatgattt atgctgaaga ggagatggga agcagtgttc agcagatcct
     2521 gcatttcctt cacaagcaga agttctttgc gtcgaatatg gcttaaattt gcttcgattg
     2581 atgtaaactt tagctgattt ttt
//
