LOCUS       NM_001127602            2778 bp    mRNA    linear   ROD 18-NOV-2024
DEFINITION  Rattus norvegicus solute carrier family 25, member 53 (Slc25a53),
            transcript variant 1, mRNA.
ACCESSION   NM_001127602 XM_001054842
VERSION     NM_001127602.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Apr 11, 2023 this sequence version replaced NM_001127602.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166437.1, SRR26360176.2248198.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680443, SAMN12840105
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on manual assertion,
                                                  longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-245               JAXUCZ010000021.1  105111692-105111936 c
            246-305             JAXUCZ010000021.1  105107222-105107281 c
            306-2778            JAXUCZ010000021.1  105099191-105101663 c
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..2778
                     /gene="Slc25a53"
                     /gene_synonym="Mcart1l"
                     /note="solute carrier family 25, member 53"
                     /db_xref="GeneID:679135"
                     /db_xref="RGD:1591860"
     exon            1..245
                     /gene="Slc25a53"
                     /gene_synonym="Mcart1l"
                     /inference="alignment:Splign:2.1.0"
     exon            246..305
                     /gene="Slc25a53"
                     /gene_synonym="Mcart1l"
                     /inference="alignment:Splign:2.1.0"
     exon            306..2778
                     /gene="Slc25a53"
                     /gene_synonym="Mcart1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             337..1257
                     /gene="Slc25a53"
                     /gene_synonym="Mcart1l"
                     /note="mitochondrial carrier triple repeat 1-like"
                     /codon_start=1
                     /product="solute carrier family 25 member 53"
                     /protein_id="NP_001121074.1"
                     /db_xref="GeneID:679135"
                     /db_xref="RGD:1591860"
                     /translation="MEEQNNSAGKELQHKTRAEVPGKKSWQSQAYTLGAISNFMSTFL
                     TFPIYKVVFRQQIHAVAVSEAVRQLWHEGPQYFYRGIYPPLLSKTLQGTLLFGTYDSL
                     LCFLSPVGPHSLGQRWTAGLMSGVVEAVALSPFERVQNVLQDARKQACFPSTFSILKE
                     FNSYGLWGRLSLGYYRGFWPVLVRNSLGSALYFSFKDPIQDGLARQGLPHWVPALVSG
                     SVNGTITCLILYPLIVLVANMQSHIGWQRMPSLWASAQDVWDTRGRKILLIYRGGSLI
                     ILRSSVTWGLTTAIHDFLQRKSHTKKEMKD"
ORIGIN      
        1 cagcctgcag agctgcagcg gctgctttta gcctctgccc attgagacaa aagagagtga
       61 cgaaggtagt ggtatggcca atcagcagtg agcaggggcg gcctcccggc aaagcctggg
      121 ccaggatgct aatgcctgcc agagggggga acctgctgga gggggctgcg gcagactggc
      181 gcgggagcga gcgtggcgtc aagtgcagct tggactcacg gacctggccc atttacattt
      241 cattctgtga gttagtccat tgctgaactg tctacccgac tcaagtccca catccttgag
      301 gacagcttct tccacctgtg tcccgttgta ttcaccatgg aggagcagaa taactctgct
      361 gggaaggagc ttcaacacaa gacacgagca gaagttccag gaaagaaaag ctggcagtca
      421 caggcctaca cccttggggc gatttccaac tttatgtcta ctttcctgac ctttcctatc
      481 tataaggttg tgttccggca gcagatccat gctgtggcag tgtcagaggc tgtgagacag
      541 ctttggcacg aaggccctca gtacttctac cggggcatct atcctcctct tctctccaag
      601 accctccaag ggactctgtt gtttggcact tatgatagtt tgctgtgctt tctctcccct
      661 gttgggccac actcccttgg acagcgctgg actgcggggc tcatgtcagg tgtagtagaa
      721 gctgtagcac ttagcccctt tgagagagta cagaatgtgc ttcaggatgc tcgaaagcaa
      781 gcttgcttcc ctagcacctt tagcattctc aaggaattca attcttatgg gctttggggg
      841 aggctgtcac tgggctatta tcggggtttc tggccagtcc tggtcagaaa cagcctggga
      901 agtgctctct atttctcctt caaggatcct atccaggatg gcttggcaag gcaaggcctg
      961 ccccattggg ttcctgcttt ggtgtctggt agtgtcaatg gaaccattac ctgcctgatt
     1021 ctgtatcctc tgattgtgct agttgccaat atgcagtctc atattggctg gcagagaatg
     1081 ccaagcctat gggcctctgc gcaggatgtg tgggacactc gaggtagaaa aatcctgctg
     1141 atttatagag gaggatccct gatcatcctc aggtccagtg tgacatgggg cctcactact
     1201 gctattcatg acttcttgca gagaaagtca cacaccaaga aagagatgaa agactgacca
     1261 aaggaaatgc ggtggctatg gtatctttgt tttaaatctt tccttgttgg ttgtgtatag
     1321 tatatttctt tggcttggtt acctaaaaca accattactt gcaaactgtc actgcatgtg
     1381 agaagctcgt aacttttcac ctgttagtca cagacaaaac ctaccaggat tccttggtca
     1441 agaaaagtct ccctaggcta tacacagaac ctggagcctt taaataagct gtagcccaga
     1501 ttaaatgtcg tttcttcaag gtttcttttt gtaaataaga ggaaacttta aaagaagact
     1561 ctactcagta ctgtgagtct ggggtccttc tatgtgtccc tctgagcaag ctgagtggaa
     1621 ctccaagttc aacgaactac actagacttt gaggacaact tcaaagatgc ctatatttta
     1681 ctaacatttc tcactgcctc taccacagcc actctcactt caagctgtgg gtcccatttt
     1741 cagggtatct gctctgatta acaaccctag attagattca cttccaccca tcagatgcct
     1801 caagatgcca ctgctgatcc taaacatggg gctgagaaaa catttggtgc ctggatagaa
     1861 ggaaaaaaga ctttaaagca agaattttaa tttaattaca tgccaaatag agaaaaatat
     1921 tactatagat ggtttggtgt tatctgatat atattatata tcatatatat atatatatat
     1981 atatgattct gttgcctaca aaccatttaa gtttctataa gaaacttgga cttagcatga
     2041 acttatctct tcataattca ttgctaattc tgttgatgtg aacagctcta tagtgtaatg
     2101 atcttagcct gccattaaag gccattgtca atatggaccc catataactt tctgcacatt
     2161 ttttaccaca catgcatgaa atgcataagc caaccaaaca gtgtttttca ctccccagac
     2221 attccatgaa cttacccaag gatatactct gccccacact gttctcttca ttcgcactgt
     2281 tccccaataa aagacctcga atttacaaaa gtccagctcc aatcgcactg tctaaatgga
     2341 gccacttctc tatcgccccc cccaaacctg aatgttgcat tacttttgtg atattcattt
     2401 tttctcagct catcaacatg cactgatccc ttcatgtcac tgatcccatg tggccctaat
     2461 gttcttgccg ttcttcaata cctcctacta gtctgtaaac ttcttgaaag cagggattct
     2521 tgtatgcatt tttaaatcct ccattgtgcc taggtgctca ataaagttgg tgaattatcg
     2581 aattgattat caagctgtga tatggtctct atcctcaggg tgctatccct attacatgaa
     2641 gataatgtta ctgactcatt gtcaatgaga cacatgcctt ttggatgtgt ttactttctt
     2701 ttaatagtgg atttagtttt gtgctaatta tgatgccaat gacaataaca atgacaataa
     2761 aattatgttc aaccacaa
//
