LOCUS       NM_001127590            2830 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 25, member 42 (Slc25a42),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001127590 XM_001070712 XM_001071187
VERSION     NM_001127590.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Fiermonte,G., Paradies,E., Todisco,S., Marobbio,C.M. and
            Palmieri,F.
  TITLE     A novel member of solute carrier family 25 (SLC25A42) is a
            transporter of coenzyme A and adenosine 3',5'-diphosphate in human
            mitochondria
  JOURNAL   J Biol Chem 284 (27), 18152-18159 (2009)
   PUBMED   19429682
REFERENCE   3  (bases 1 to 2830)
  AUTHORS   Haitina,T., Lindblom,J., Renstrom,T. and Fredriksson,R.
  TITLE     Fourteen novel human members of mitochondrial solute carrier family
            25 (SLC25) widely expressed in the central nervous system
  JOURNAL   Genomics 88 (6), 779-790 (2006)
   PUBMED   16949250
REFERENCE   4  (bases 1 to 2830)
  AUTHORS   Da Cruz,S., Xenarios,I., Langridge,J., Vilbois,F., Parone,P.A. and
            Martinou,J.C.
  TITLE     Proteomic analysis of the mouse liver mitochondrial inner membrane
  JOURNAL   J Biol Chem 278 (42), 41566-41571 (2003)
   PUBMED   12865426
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC160887.1.
            
            On or before May 24, 2008 this sequence version replaced
            XM_001071187.1, XM_001070712.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC160887.1, FQ107026.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132263, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..2830
                     /gene="Slc25a42"
                     /note="solute carrier family 25, member 42"
                     /db_xref="GeneID:689414"
                     /db_xref="RGD:1592346"
     exon            1..23
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
     exon            24..135
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..1011
                     /gene="Slc25a42"
                     /codon_start=1
                     /product="mitochondrial coenzyme A transporter SLC25A42"
                     /protein_id="NP_001121062.1"
                     /db_xref="GeneID:689414"
                     /db_xref="RGD:1592346"
                     /translation="MDNGVQEGSVRLGEDAEAVLAGAVSTKRDHRQVLSSLLSGALAG
                     ALAKTAVAPLDRTKIIFQVSSKRFSAKEAFRLLYFTYLNEGFLSLWRGNSATMVRVIP
                     YAAIQFSAHEEYKRILGHYYGFRGEALPPWPRLLAGALAGTTAASLTYPLDLVRARMA
                     VTPKEMYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKSLHREY
                     SGRPQPYPFERMVFGACAGLIGQSASYPLDVVRRRMQTAGVTGHQHGSILSTLRSIVR
                     EEGAVRGLYKGLSMNWLKGPIAVGISFTTFDLMQILLRQLQS"
     exon            136..241
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
     exon            242..267
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
     exon            268..434
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
     exon            435..551
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
     exon            552..703
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
     exon            704..2805
                     /gene="Slc25a42"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcggcga cgcgtccggg caggactgag cctcccgcgg ttagcacgcc tgggatggat
       61 aatggtgtgc aggaaggctc ggtgcgcctg ggagaggatg ctgaagccgt cctggccggg
      121 gccgtctcca caaagagaga ccacaggcaa gttctcagct ccctgctatc tggagccctg
      181 gccggtgcac ttgccaagac agcagtagcc cccctagacc ggaccaagat catcttccaa
      241 gtgtcttcaa aaagattttc tgccaaggag gccttccggc tcctctactt cacctacctc
      301 aacgagggct tcctcagcct atggcgtggg aactcggcca ccatggtgcg agtgattcct
      361 tacgcagcca tccagttcag cgcacacgaa gaatacaaac gcatcctggg ccactactat
      421 ggctttcgtg gagaagccct gcccccatgg ccacgcctcc tggctggcgc cttggcagga
      481 accaccgcgg cttccctcac gtaccctctg gacctggtca gagcaaggat ggctgtgacg
      541 cccaaggaga tgtacagcaa catctttcat gtcttcatcc gcatctcaag agaggaagga
      601 ctgaagaccc tttatttcgg gttcacaccc actgtgctgg gtgtcattcc ctatgcggga
      661 ctcagcttct ttacgtacga gtcactgaag agcctacacc gagagtacag tggtcgcccg
      721 cagccctacc cctttgagcg catggtcttc ggggcctgtg ctggccttat cgggcagtcg
      781 gcctcctacc ctctggacgt ggtgcggcgg cgcatgcaga cagcaggtgt cacaggccac
      841 cagcacggct ccatcctgag cacgctacgc tccattgtcc gtgaggaggg cgcggtgcgg
      901 gggctctaca aaggtctgag catgaactgg ctgaaagggc cgattgctgt ggggatcagc
      961 ttcaccactt tcgacctcat gcagatcctg ctgcgccagc tgcagagcta ggctaagaca
     1021 accgtggacg gtgagctgtc agaccaaggg catgcagctg tgtgccggca gcagcgctgt
     1081 ggtactttga ggatgggcag gagggcggga cctggcttgg ggctgtgggg cccatagcca
     1141 agtgctggcc cttagggtgt gacattgtga tgatggatat tggctgtccc ctcccttcag
     1201 ttccttgcta ttggctggtg agtctcctga ggcatcaccc aaaggcccct aatgggtcaa
     1261 gtgcacttcc tggctctgtg tcctttgacg tgctgctgac tttagtgccc attggcacac
     1321 caggctcaga gcccatccct tcttaccatg acggtgcccg gcctgcagat gtgatggctg
     1381 ttcctttaag ccacgcactg gagggtctca gcttgctcag tggtggccgt acttttgtcc
     1441 ctcagtcctc caccacacct gcccaccctc tccccagtga caaatggctg ctcttgctca
     1501 catagctttc tccccagagc actgtgccca tcccattcct gagggctgca catgaccgtt
     1561 gccaactgcc tggcttgtaa cctttccagg aggccccatg gccaccaggc aaggggtcaa
     1621 gttctgaccc actggaaatg cctatgtggg tgtcgtcact cacggggggc atctcccaag
     1681 gcacaccagt caggccacac gcaggcccaa agcctcttat atgcacagca tccatggagg
     1741 tgggctcaag ctcttgagac tgctcaagcc agaactcggg gccttctgtg aggccctgat
     1801 acccatcgag gctgtcattc agccaggcca catgaagccc caagatgggt ggcttttcct
     1861 gtatgagtga gtacagatat atccatggcc ggggaattgg gactggcagg gtccccaggg
     1921 accaccagcc agctttctca agaactcctg gggttccctt ggtgtcacag gaacctatta
     1981 cctttcatgg ggtctggggt tctggattta gggtctttgg gacagtccca gttagaagcc
     2041 ttggctatcc tgctcctcag tgttatctag gctagcctcc aacttacagc agtcctcctg
     2101 cctctagttt ctagttttta acttatcctg ccccaggtct gcacatacaa accccctatc
     2161 ctgtgcagtg cggtgacctg ggtgttgatt cccacagcca gatggacaga cggcagccgt
     2221 ctcacatgca ggacctgagc agggtggctt gacctccagg catgtgcagt tcttgctgtg
     2281 gtcctagctc gttctgtatt tcttaccttg tgcctgtgat gctcggccat ctctctgcct
     2341 cctcgtatgg tgatgggcgt ccccaccatg tcccccagta tcctggcaac ctctggtggc
     2401 tagagggact gtgctcttgt gagtgtactg cccactctgt tccctgcctg gccccatatt
     2461 gggatggaga ggctgggcac cccatgccag gaggctggag gtgacggaag ctcctgggcc
     2521 accccaacag gttgcaccat gtagatggct caagccctgc atcaggcaac cggctgggca
     2581 ggagacgcta gggtgtcatg ggtccctgat cttcttgctt ccccatatac ccccagtagc
     2641 tctggcttag gggctctctg cctctgtggc tgcccttctc catggtcact gtccagtctg
     2701 gagttctatt ttgatgccat gaagatactt tgtttatata tgtttatata ttttgaagat
     2761 ttgtgccaac agagtatatt taataaaaat ttaataactc ctgctaaaaa aaaaaaaaaa
     2821 aaaaaaaaaa
//
