LOCUS       NM_001393710            2852 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus solute carrier family 25, member 40 (Slc25a40),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001393710
VERSION     NM_001393710.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.18115.1,
                                           SRR26643294.17016.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-167               JAXUCZ010000004.1  26631217-26631383   c
            168-239             JAXUCZ010000004.1  26627866-26627937   c
            240-351             JAXUCZ010000004.1  26627595-26627706   c
            352-411             JAXUCZ010000004.1  26625601-26625660   c
            412-518             JAXUCZ010000004.1  26623680-26623786   c
            519-586             JAXUCZ010000004.1  26601264-26601331   c
            587-711             JAXUCZ010000004.1  26599607-26599731   c
            712-885             JAXUCZ010000004.1  26598220-26598393   c
            886-995             JAXUCZ010000004.1  26594730-26594839   c
            996-1077            JAXUCZ010000004.1  26592551-26592632   c
            1078-1158           JAXUCZ010000004.1  26588401-26588481   c
            1159-2852           JAXUCZ010000004.1  26586377-26588070   c
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q12"
     gene            1..2852
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /note="solute carrier family 25, member 40"
                     /db_xref="GeneID:296813"
                     /db_xref="RGD:1308774"
     exon            1..167
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            168..239
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            240..351
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     CDS             252..1265
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /note="probable mitochondrial glutathione transporter
                     SLC25A40"
                     /codon_start=1
                     /product="mitochondrial glutathione transporter SLC25A40"
                     /protein_id="NP_001380639.1"
                     /db_xref="GeneID:296813"
                     /db_xref="RGD:1308774"
                     /translation="MEPETEGPPPTIQVTPLQQMMASCAGAVVTSLMVTPLDVVKIRL
                     QAQNNPFPKGKCFLYSNGLMDHICICEEESKKAWYKKPGNFHGTLDAFLKIVRNEGIK
                     SLWSGLPPTLVMAVPATVIYFTCYEQLSTFLKTKLGENETRIPIVAGIVARFGAVTMI
                     SPLELIRTKMQSKTFSYKELYQIVSMKVSEDGWISLWKGWAPTILRDVPFSAMYWYNY
                     ENLRRWLCEKSDLYESTFMINFTAGALSGSFAAVATLPFDVVKTQKQTQLWTHEYCKF
                     PEPLDMSTWSIMKNIVADRGFSGLFTGLIPRLVKIVPACAIMISSYELGKGFFQQQNV
                     ESR"
     exon            352..411
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            412..518
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            519..586
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            587..711
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            712..885
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            886..995
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            996..1077
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            1078..1158
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
     exon            1159..2852
                     /gene="Slc25a40"
                     /gene_synonym="RGD1308774"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acccctggtc tccggcgtcc tcttcgggtt ctggcgccgc tctgcagact tgggagtgtg
       61 gggcaacccg ggcagtggac gcagttagcc tcggaggctt cagcacattg cggtcatcac
      121 cttctaggtt tgctggaacc acggccttgc agttgcctcg ccaccagcgc tgaggatcca
      181 acccaagact tggccatgtt aggcaagcac tcctgattat tgtttttata acctaacagc
      241 tagttagaaa catggagcct gaaactgaag ggccaccgcc aacaatccaa gtgacacctc
      301 ttcagcaaat gatggcctcc tgtgctgggg ctgtagtgac atcactaatg gtgacacccc
      361 tggatgttgt taaaattcga ctccaagccc agaacaaccc attccctaaa ggcaagtgtt
      421 ttctgtacag taatggactc atggatcaca tatgtatctg tgaagaggag agcaagaaag
      481 catggtataa gaagccagga aacttccatg ggactctgga tgccttttta aaaattgtcc
      541 ggaatgaggg cataaaatcc ctgtggagtg gcctccctcc tactctagtg atggcagttc
      601 ctgccacagt tatttatttc acctgctatg agcagttaag tacttttctg aaaaccaaat
      661 taggagaaaa tgaaacccgg ataccaatag tggctgggat tgtcgccaga tttggtgcag
      721 taacaatgat aagcccgtta gaattgatca gaactaagat gcagtctaag acgttttcct
      781 acaaggagct ctatcagatt gtgagcatga aagtgtctga agacggttgg atttcccttt
      841 ggaagggctg ggctcctact attcttagag atgtgccctt ctcagcaatg tactggtata
      901 attatgaaaa tttaaggagg tggctttgtg agaaatctga tttatatgaa tcaacattta
      961 tgatcaactt tactgcagga gcattgtctg gttcttttgc agctgttgcg actttaccat
     1021 ttgatgtagt aaagacacag aaacaaacac aactgtggac gcacgagtat tgtaaatttc
     1081 ctgaaccttt ggatatgtca acctggagta taatgaagaa cattgttgct gacagaggat
     1141 tttctgggtt gtttacaggt ctaattcctc gattagttaa aattgttcct gcgtgtgcca
     1201 ttatgatcag ttcatatgaa ttaggaaagg ggttcttcca gcagcaaaat gttgaaagtc
     1261 ggtaattctc atgatggact tttgacttga gataacaacc agagccaaat aagatgagac
     1321 tttgtaggca gaatggtttt ttcaacatta ttatcttaaa gagtgacttt atctgtcttc
     1381 cctataattt aaatgaataa taataatttc tagtccacct ttaaatcata atcctagttt
     1441 tcagtttttg aaatattaaa aacataatcc agaaactgca gccacttagt actcttgcag
     1501 gacaagtttt ctgcgtgcat agatcattac acacttccct gtaaaccaat gctgtgagtg
     1561 tggggcacat cagaactttt tggattgtgt ataagcgatg caatgtagcg agcagtgcag
     1621 tctcacgtaa attcaaatca taagtatcaa catgtcagta gagagcggaa gaactgccac
     1681 atggcattgt tcacagcccc tggatggtat ctgttaactt ctctaattca ggggcattgt
     1741 gttccctcac accggatact gccttaaggc atcatgtagc atagaatttc cctaatggaa
     1801 agtgtagcca cttaaccatg tgaaccaaag tataatcatt tacataatgt aaatgattga
     1861 catttttagt gactaacgac gcctatctaa tatttttgta gggaatatat tttcactggt
     1921 gatagtaaat atatattcac taaatctgga tctgcagtag aaaaccttgc tgtacttaat
     1981 gaaaataact agtttgggtc acaggaattg gctgctttta actagcttgc cttccaaatg
     2041 tcattgtttg tggagttctt taggtcagtt ttacaacttt ttctgctaca gccaatattc
     2101 cctattctaa aagatcaaaa tataatgctc caaaattttc agctcttgta tttgatgtcc
     2161 caaaatgatg ctgctacaat cacacacctt ccctcaggtg acagcataca gaactcaggc
     2221 acatggaaat atataagttg cctttaggct atttgtatga attgcacatg aaacacatgg
     2281 attattcatc actttaagta ggaatgaggt ttttaaaaat tatatttatt tatttgttgt
     2341 atatgtctat gtatatatga cggtcagagg aaactttaag gagttagttc ttcccttcta
     2401 ccatgtggac tttgggattt gaactcactt ggtcaggctt aacagcaagt gcccttcccc
     2461 caccctgagc tcaggatgag attttaagta tgatgggaat gtagctcagg tgttgaactc
     2521 agagtttgat tccagcacaa atgataataa tttaaatatg taagtaagat ggcaatgcaa
     2581 gaaatgctgt tgtgttttac ttacctctat aaagcaaaaa gcactttatc acgtcctata
     2641 tgtattctat gaaatatgaa gtacctcctc cctgtcgtaa gagcataatg tattttggtg
     2701 acaatgatct ctagggttgg taggggaaca aatgcatttt atatcattgt ggaaaatgta
     2761 tgtttcatca gaaataaatg atacacgatt tattgtacca tgttttacat tacaatcctg
     2821 tgttcattta tattaaaaaa ttaatatatc ca
//
