LOCUS       NM_001030032            1666 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus solute carrier family 25, member 38 (Slc25a38),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001030032 XM_217295
VERSION     NM_001030032.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Lunetti,P., Damiano,F., De Benedetto,G., Siculella,L., Pennetta,A.,
            Muto,L., Paradies,E., Marobbio,C.M., Dolce,V. and Capobianco,L.
  TITLE     Characterization of Human and Yeast Mitochondrial Glycine Carriers
            with Implications for Heme Biosynthesis and Anemia
  JOURNAL   J Biol Chem 291 (38), 19746-19759 (2016)
   PUBMED   27476175
REFERENCE   3  (bases 1 to 1666)
  AUTHORS   Barupala,D.P., Dzul,S.P., Riggs-Gelasco,P.J. and Stemmler,T.L.
  TITLE     Synthesis, delivery and regulation of eukaryotic heme and Fe-S
            cluster cofactors
  JOURNAL   Arch Biochem Biophys 592, 60-75 (2016)
   PUBMED   26785297
  REMARK    Review article
REFERENCE   4  (bases 1 to 1666)
  AUTHORS   Guernsey,D.L., Jiang,H., Campagna,D.R., Evans,S.C., Ferguson,M.,
            Kellogg,M.D., Lachance,M., Matsuoka,M., Nightingale,M., Rideout,A.,
            Saint-Amant,L., Schmidt,P.J., Orr,A., Bottomley,S.S., Fleming,M.D.,
            Ludman,M., Dyack,S., Fernandez,C.V. and Samuels,M.E.
  TITLE     Mutations in mitochondrial carrier family gene SLC25A38 cause
            nonsyndromic autosomal recessive congenital sideroblastic anemia
  JOURNAL   Nat Genet 41 (6), 651-653 (2009)
   PUBMED   19412178
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001030032.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099762.1, SRR26643289.24589.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-216               JAXUCZ010000008.1  128713180-128713395
            217-338             JAXUCZ010000008.1  128717098-128717219
            339-423             JAXUCZ010000008.1  128718037-128718121
            424-603             JAXUCZ010000008.1  128720774-128720953
            604-778             JAXUCZ010000008.1  128721375-128721549
            779-945             JAXUCZ010000008.1  128724247-128724413
            946-1666            JAXUCZ010000008.1  128725246-128725966
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..1666
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /note="solute carrier family 25, member 38"
                     /db_xref="GeneID:301067"
                     /db_xref="RGD:1311914"
     exon            1..216
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /inference="alignment:Splign:2.1.0"
     CDS             88..1068
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /codon_start=1
                     /product="mitochondrial glycine transporter"
                     /protein_id="NP_001025203.2"
                     /db_xref="GeneID:301067"
                     /db_xref="RGD:1311914"
                     /translation="MGVSAEPRSLSVARAGLASPVIEKARSALLPSQDVEDTVETLML
                     HPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQPSDVGPRRVGMLSVFLKVVRTES
                     LLGLWKGMSPSIVRCVPGVGIYFGTLYSSKQYFLRGHPPTALESVILGMGSRSVAGVC
                     MSPITVVKTRYESGAYSYESVYAALRSIYCSEGSRGLFRGLTATLLRDAPFSGLYLMF
                     YSQTRATVLHGADELDAALMPLVNFSCGVFAGILASLVTQPADVIKTHMQLSTVKCQC
                     IGQVATLILKTHGLRGFFHGSVPRALRRTLMAAMAWTVYEEMMAKMGLKS"
     exon            217..338
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /inference="alignment:Splign:2.1.0"
     exon            339..423
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /inference="alignment:Splign:2.1.0"
     exon            424..603
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /inference="alignment:Splign:2.1.0"
     exon            604..778
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /inference="alignment:Splign:2.1.0"
     exon            779..945
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /inference="alignment:Splign:2.1.0"
     exon            946..1666
                     /gene="Slc25a38"
                     /gene_synonym="RGD1311914"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctcccccgg aaatataggg cggcttgtct cgggtactga gacccgaggc cgggcggccg
       61 ggcggccggg cggcagggtg gggagggatg ggcgtgagcg cggagcctcg gagcctctca
      121 gtcgcccggg ccgggctcgc gtcccccgtg atcgagaagg cgcgctcggc gctgctgccg
      181 tcgcaggatg tagaggacac agtggagacg ctcatgttac atccagtgat taaggctttc
      241 ctctgcggct ccatcagcgg aacctgttcc acgctcctct tccagcctct ggacctcctc
      301 aaaacccgcc tgcagaccct gcagccctca gacgtagggc ccaggcgtgt tgggatgctg
      361 tctgtgttct tgaaggtggt tcgcacagaa agtcttctgg gcctttggaa agggatgtct
      421 ccttccattg tgagatgtgt ccctggcgtt ggaatctact ttggcaccct gtattcttct
      481 aagcagtatt tcttgcgagg ccatcctccc actgccctgg aatcggtcat cctgggcatg
      541 ggatctcgct ctgtggcagg agtttgcatg tcacccatca cagtggtcaa gacacgctat
      601 gagagtgggg cttacagcta cgagagcgtc tatgcagccc tgcggagcat ctactgtagc
      661 gagggcagcc gtggcctctt caggggcctg acagcaactc tgcttcgtga cgcccccttc
      721 tcggggctct acctgatgtt ttacagccag accagggcca cagtgctcca tggcgcagac
      781 gagctggatg ctgctctgat gccccttgtt aatttcagct gtggggtatt tgctggcatt
      841 ctggcttcac tggtgactca acctgcagac gtaatcaaaa cccatatgca gctctccaca
      901 gtgaagtgtc agtgcattgg ccaagtggcc accctcattc tcaagaccca tgggctgcgt
      961 ggcttctttc atggcagtgt tccccgggcc ctccgtagaa ctctgatggc tgctatggca
     1021 tggactgtct atgaagagat gatggccaag atgggcctca agtcctgacg agagagggct
     1081 ggaaaggaag atctgctgtc cggctggttc ctgccatggc tgctgcagct cactctcctg
     1141 gagtcagggg aagaacacaa catctcaaga gccaggcaca agtgctgcat tcaaagagag
     1201 cagataggta gctggagcca caggctggag ttgtcagtgc ccatggctcc atgcacactc
     1261 cccatcagtg ctgtacgcgg ggctggaagc ttggctgccc cacaatgcta cttgagagga
     1321 ggcctctgct aggtcgctct gtttcagcta cctgcctaca ttacagggca acttagaatg
     1381 ttggtaatga aggaatccca cagtagagag gtgtgggcct cctgccatgt ctgagggcag
     1441 gagtctcaag ttagggaaga cttggcctaa gagagtgcgg tgaaccagag agatggctca
     1501 gcaaggagag gtgcttgaca gaggctgcac tggccctgga cccacgaggt acgggaaaga
     1561 attgctgcaa gttgtcctct gacttccaaa cgagcactgt ggcaagcacc catacccaat
     1621 gaacaaacag atgtaatact tttaaaataa agacttcagc agggtg
//
