LOCUS       NM_001013187            1815 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 25, member 30 (Slc25a30),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001013187 XM_341357
VERSION     NM_001013187.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Xiong,F., Gao,J., Li,J., Liu,Y., Feng,G., Fang,W., Chang,H.,
            Xie,J., Zheng,H., Li,T. and He,L.
  TITLE     Noncanonical and canonical splice sites: a novel mutation at the
            rare noncanonical splice-donor cut site (IVS4+1A>G) of SEDL causes
            variable splicing isoforms in X-linked spondyloepiphyseal dysplasia
            tarda
  JOURNAL   Eur J Hum Genet 17 (4), 510-516 (2009)
   PUBMED   19002213
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Haguenauer,A., Raimbault,S., Masscheleyn,S., Gonzalez-Barroso
            Mdel,M., Criscuolo,F., Plamondon,J., Miroux,B., Ricquier,D.,
            Richard,D., Bouillaud,F. and Pecqueur,C.
  TITLE     A new renal mitochondrial carrier, KMCP1, is up-regulated during
            tubular cell regeneration and induction of antioxidant enzymes
  JOURNAL   J Biol Chem 280 (23), 22036-22043 (2005)
   PUBMED   15809292
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001013187.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087106.1, AY724532.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-62                JAXUCZ010000015.1  57508900-57508961   c
            63-193              JAXUCZ010000015.1  57502560-57502690   c
            194-341             JAXUCZ010000015.1  57500834-57500981   c
            342-436             JAXUCZ010000015.1  57497458-57497552   c
            437-522             JAXUCZ010000015.1  57496026-57496111   c
            523-618             JAXUCZ010000015.1  57495430-57495525   c
            619-743             JAXUCZ010000015.1  57494585-57494709   c
            744-882             JAXUCZ010000015.1  57492708-57492846   c
            883-963             JAXUCZ010000015.1  57489547-57489627   c
            964-1815            JAXUCZ010000015.1  57488085-57488936   c
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15q11"
     gene            1..1815
                     /gene="Slc25a30"
                     /note="solute carrier family 25, member 30"
                     /db_xref="GeneID:361074"
                     /db_xref="RGD:1359702"
     exon            1..62
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            63..193
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..1005
                     /gene="Slc25a30"
                     /codon_start=1
                     /product="kidney mitochondrial carrier protein 1"
                     /protein_id="NP_001013205.1"
                     /db_xref="GeneID:361074"
                     /db_xref="RGD:1359702"
                     /translation="MSALNWKPFVYGGLASITAECGTFPIDLTKTRLQIQGQTNDAKF
                     REIRYRGMLHALMRIGREEGLRALYSGIAPAMLRQASYGTIKIGTYQSLKRLAVERPE
                     DETLLINVVCGILSGVISSAIANPTDVLKIRMQAQNSAVQGGMIGNFISIYQQEGTRG
                     LWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVSTHFLSSFTCGLVGALAS
                     NPVDVVRTRMMNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWN
                     IIFFLTYEQLKKLDL"
     exon            194..341
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            342..436
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            437..522
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            523..618
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            619..743
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            744..882
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            883..963
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
     exon            964..1815
                     /gene="Slc25a30"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggaggtgct cccaggcggc tgcactggct cggaggagta gcaggaggag ctccgccgca
       61 ggaacaaacc tggaggcaaa ccagaaggag gcaatgtttg aatgactgta agaagaccag
      121 acagtgaaaa tgtcagccct caactggaag ccctttgtgt acggagggct ggcctccatc
      181 accgcagaat gtggtacatt tccaattgat ttgactaaga ctcggcttca gattcaaggc
      241 cagacaaatg atgccaagtt ccgagagatc aggtaccgag gaatgttgca cgcgctgatg
      301 aggataggcc gggaagaagg cctgagggcg ctgtattcag ggattgcacc tgcaatgctg
      361 cgccaggctt cctatggaac catcaagatc ggcacttacc aaagcttgaa gcgactggct
      421 gtggaacgcc cggaagatga aaccctgctg atcaatgttg tgtgtggaat cctgtctgga
      481 gtcatatcct cagctattgc taatccaact gatgttttga aaatccggat gcaagcacag
      541 aacagcgctg ttcaaggagg aatgataggc aacttcatta gcatttacca gcaggaaggg
      601 actagaggac tgtggaaggg cgtgtccctc acagcccaga gggcagccat tgtggtcggt
      661 gtggaacttc cagtctatga catcaccaag aagcacctga tactctcagg cctgatggga
      721 gatactgtct caacacattt tctctcgagc ttcacctgtg gcctggtggg ggccttggcc
      781 tcaaacccag tcgatgttgt gaggacccgc atgatgaatc agagagatct tcgagatggc
      841 agatgctcgg gctataaagg taccttggat tgtctattgc agacatggaa gaatgaaggg
      901 ttttttgctc tatataaagg gttttggcca aactggctgc gccttggtcc ttggaatatc
      961 attttctttt tgacttacga acagctgaag aaactggact tgtgaccaca caagctattg
     1021 ttctgacaaa ctgactttca ctatggtaga gcctcctgtg ctgcttctgg ctgcttctca
     1081 ctccacagct caccacagct tctgggacag gagcaatgga tgaagacccg gttcttcaga
     1141 ttgtcgagtg ttggtgctgg acgcctttcg tctgtgctca gagattagag cgcaatagca
     1201 cccactcgct ggtggttacc attgaagtgc cctttgacat ccgagataat cagtgcacat
     1261 aatacatctt tcttgccgta gaaaacctgc aggaaatcag aaccgtgtgc cgctgcctgg
     1321 agagcagcct cgctgcctga cttccagctg tgaacggcag ctgctctgag gaggcccctg
     1381 gagtggtgga gtagtagtgt tcctctacca ttgagagctt tagtttcctg tcatctgaaa
     1441 acattttaca tctggacttt tatcccccag acctggacag tttagcgagt aggtctttag
     1501 cactgcttta taattcctgt ttgggcagga cctttcactt acggaaagac agactcgacc
     1561 tttgtgaggt aacggtaacc gtttgcccta ggattttttt tttttttttg gtagcaaagt
     1621 tttttatttc catactgaac aaatggagat aatcatgctt tgttaagtag gggttacatg
     1681 aaggaaaaac tgcagaggct gctgtgtgaa ggatgagtgt gtttacatct gtcagtcaac
     1741 agttggccta ccatagggct ctcctggtcc tggtgaccaa aagcctttgc taaataaaga
     1801 acactgcagg agaaa
//
