LOCUS       NM_133614               2600 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus solute carrier family 25 member 21 (Slc25a21),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_133614
VERSION     NM_133614.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Fiermonte,G., Dolce,V., Palmieri,L., Ventura,M., Runswick,M.J.,
            Palmieri,F. and Walker,J.E.
  TITLE     Identification of the human mitochondrial oxodicarboxylate carrier.
            Bacterial expression, reconstitution, functional characterization,
            tissue distribution, and chromosomal location
  JOURNAL   J Biol Chem 276 (11), 8225-8230 (2001)
   PUBMED   11083877
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Mar 29, 2021 this sequence version replaced NM_133614.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089099.1, AJ289714.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-484               JAXUCZ010000006.1  80437237-80437720   c
            485-533             JAXUCZ010000006.1  80166877-80166925   c
            534-617             JAXUCZ010000006.1  80083283-80083366   c
            618-684             JAXUCZ010000006.1  79996401-79996467   c
            685-744             JAXUCZ010000006.1  79989888-79989947   c
            745-852             JAXUCZ010000006.1  79984863-79984970   c
            853-1017            JAXUCZ010000006.1  79964455-79964619   c
            1018-1199           JAXUCZ010000006.1  79943842-79944023   c
            1200-1252           JAXUCZ010000006.1  79942956-79943008   c
            1253-2600           JAXUCZ010000006.1  79938480-79939827   c
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q23"
     gene            1..2600
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /note="solute carrier family 25 member 21"
                     /db_xref="GeneID:171151"
                     /db_xref="RGD:621444"
     exon            1..484
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             418..1314
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /note="oxodicarboxylate carrier; solute carrier family 25
                     (mitochondrial oxodicarboxylate carrier), member 21;
                     solute carrier family 25 (mitochondrial oxoadipate
                     carrier), member 21"
                     /codon_start=1
                     /product="mitochondrial 2-oxodicarboxylate carrier"
                     /protein_id="NP_598298.1"
                     /db_xref="GeneID:171151"
                     /db_xref="RGD:621444"
                     /translation="MSASNVSLLHETCRQVAAGGCAGLVEICLMHPLDVVKTRFQVQR
                     SVTDPQSYKSLRDSFQVIFRTEGLFGFYKGIIPPILAETPKRAVKFSTFELYKKFLGY
                     MSLSPGLTFPIAGLGSGLTEAVVVNPFEVVKVGLQVNRNMFTEQPSTFAYARQIIKKE
                     GWGFQGLNKGFTATLGRHGIFNMTYFGFYYNVKDNIPSSKDPTLEFLRKFGIGFVSGT
                     VGSVFNIPFDVAKSRIQGPQPVPGEIKYRGCFKTMETVYREEGILALYKGLLPKVMRL
                     GPGGGVMLLVYEYTYAWLQENW"
     exon            485..533
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            534..617
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            618..684
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            685..744
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            745..852
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            853..1017
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1018..1199
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1200..1252
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1253..2600
                     /gene="Slc25a21"
                     /gene_synonym="Odc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccgaggct gcttctctga cgtccttgtc taaggcagcc cttagataag cagctagcta
       61 aacaaactcc gcaggaggtc tcgataggca aattcataag cctgtatcta gaagctcaag
      121 tctgacccac tgagctaggc caagtctacc cagcccccag ttgtcagtgt tcccctccag
      181 cgcccctgtg gaaagggcag cctcaggcag cgccgggcaa attcggaccc cctccgccga
      241 cctcgccgcg agccggtgcc agaaccgccg tctttagctg gaccgcagcc acacagggaa
      301 gacttcagcc ccagaaccga cgggacccgg tctccatcgg cggcggcctt cagcgagcgg
      361 cggccttcag aggagctcgc tccagcatct tggctactct gtcccctggt cacgaagatg
      421 tcggcctcca acgtcagctt gctgcacgag acctgcaggc aggtcgcggc cggagggtgt
      481 gcaggtcttg tagaaatttg cctgatgcat cccctcgatg tggtgaaaac caggttccag
      541 gttcagagaa gtgtaacaga cccacagagt tataaaagct taagagacag ctttcaggtg
      601 atcttccgaa cagaggggtt gtttggcttt tacaagggaa ttatcccacc gattttagct
      661 gaaacaccaa aaagagctgt caagttttcc acctttgagc tgtacaagaa atttctggga
      721 tatatgtcac tatcaccagg gctgacattt cccattgctg gattaggatc tggactaaca
      781 gaagccgtcg tggttaaccc ttttgaggtg gtaaaagttg gtctacaagt caatcggaac
      841 atgttcacag agcaaccatc tacttttgct tatgcaagac aaatcattaa gaaggaaggc
      901 tgggggttcc agggcctcaa caaaggattt acagcaactc tgggacgcca cggaattttc
      961 aacatgactt actttggctt ctactacaac gtcaaagata atattccatc cagtaaggat
     1021 ccaaccttgg agtttttgag aaaatttgga attggttttg tctccgggac agtgggctca
     1081 gtctttaaca tcccctttga tgttgcgaag agtaggatcc aaggacctca gccagttcct
     1141 ggagagatca agtaccgagg ctgcttcaaa accatggaga cggtctacag ggaagaaggg
     1201 attttagcct tatacaaagg cctgctcccc aaggtgatgc gacttggacc aggtggtggg
     1261 gtgatgctgc tggtatatga atacacctat gcgtggctgc aggagaactg gtgaaggact
     1321 gagagacgct ttccccttga caacagagat gtggtctgca gccccacgca gagaagacaa
     1381 gctagacgat gccgttaaga gggggagaca gcctgctcag gagcaaagcc tgttccgatg
     1441 ttttataatt tttagacaaa ctgacatggt agtttgggcc atatacataa cactgtgaga
     1501 aggaaaataa cacgaagcag tggggtttgt aagttaggga tcactaggat agagatcaga
     1561 tacagttcat aaaagctata caaagtgtct gacccccatg cttcaccaca aaaactcatt
     1621 tgataacttt tctgagaagt ctataaatcc ataaattctt gaaaataaat tgttctgcag
     1681 ctgatttcct gagaattatt caaaggaaga cttaggtatg agtcagaatt taaacatgtt
     1741 ttacaaggaa ttacttttcc ataaatcata ttttaaaaga aaagaaagaa aaaacttaaa
     1801 tacaccaaaa cagccattta agaatgttta attttgtgag tgctgagtta aaatgtgagt
     1861 ctattggttt tctttagtaa ttaatgcatc ctcaggctcc gtttccctaa atgtatttta
     1921 tattccacat ggtgacttaa gtggatatat taaaatcatg ctatttgaag acttttgtta
     1981 aaaatagaat acatgatatt atattaaact gctttctctt acatagttca ttttgaaaac
     2041 aagatttgtt actgattttt tttggggggg tggggttagg tcacaaattg aatgaacttt
     2101 ttgggccctt ctctgttgcc caaagttgtc tccaaacacc catccttaaa aaggatgtag
     2161 gaaaataaaa ctatctccag attcttgggt ttaagtcaca ttttgaagca taaaatcaac
     2221 tatttagaat attaaaatgt ctacattaag tggcaaacat ttcaaaaatg aaaatacatt
     2281 ctttagcact tctaaacact catgcattaa tatgcactct gggaaaaaaa agaaagacag
     2341 ctttttggtc ctgatataat aaccaaagct tatttttatg tctgtactgt gtaatgagac
     2401 ttctccagtc aagaaaaaaa aatctcaaca tgttttaagt gacagttgtt cttgactaac
     2461 tagccctgtg gggtatttca actaggggca agctcaccaa aacattttga aaataaacag
     2521 tgaagatggc atggtaatta ttatgtttat taatttagag catctgaagt ataaaaataa
     2581 aaggcttttg acatactcta
//
