LOCUS       NM_001108193            2927 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 22, member 14 (Slc22a14),
            transcript variant 1, mRNA.
ACCESSION   NM_001108193 XM_001077404 XM_039081632 XM_236684
VERSION     NM_001108193.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On or before Mar 2, 2021 this sequence version replaced
            XM_039081632.1, NM_001108193.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.52909.1,
                                           SRR26643293.48172.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-36                JAXUCZ010000008.1  127794115-127794150 c
            37-127              JAXUCZ010000008.1  127788802-127788892 c
            128-640             JAXUCZ010000008.1  127785481-127785993 c
            641-744             JAXUCZ010000008.1  127784556-127784659 c
            745-899             JAXUCZ010000008.1  127784203-127784357 c
            900-1068            JAXUCZ010000008.1  127783165-127783333 c
            1069-1189           JAXUCZ010000008.1  127778534-127778654 c
            1190-1284           JAXUCZ010000008.1  127778212-127778306 c
            1285-1499           JAXUCZ010000008.1  127777756-127777970 c
            1500-1608           JAXUCZ010000008.1  127776305-127776413 c
            1609-1803           JAXUCZ010000008.1  127774739-127774933 c
            1804-2927           JAXUCZ010000008.1  127772275-127773398 c
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..2927
                     /gene="Slc22a14"
                     /note="solute carrier family 22, member 14"
                     /db_xref="GeneID:316061"
                     /db_xref="RGD:1306470"
     exon            1..36
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            37..127
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     CDS             128..2020
                     /gene="Slc22a14"
                     /note="isoform 1 is encoded by transcript variant 1;
                     solute carrier family 22 (organic cation transporter),
                     member 14"
                     /codon_start=1
                     /product="solute carrier family 22 member 14 isoform 1"
                     /protein_id="NP_001101663.2"
                     /db_xref="GeneID:316061"
                     /db_xref="RGD:1306470"
                     /translation="MTEEQNSNTEFGSQDSRDSHRHELSYPSQNWSLEMLLRRLKALD
                     DRRDDKFASVLGAIGEFGTFQWRLVALTFIPSILSTFFLLSHHFLLTAQRPYCNTSWI
                     LQVGPNLTEDEQLNLTVPRAPNGSFLTCLMYIPVPWDLDSIVHFGLNYTETCKHGWIY
                     PFAHTRSLTNEFDLVCGNEPHEENGQTVFLSGILTGSLLFGFLSDKLGRYPIILLSLL
                     GILIFGFGTAFVNSFYQYLFFRFFVAQASVGYAICSVSLVMEWLVGEHRAQAIILQHC
                     FFTIGVILLTGFAYKINHWRLLFLLGGVPMFPLICNIWVLQESPRWLMVKGKVEEAKK
                     VLCYAAEVNKKTIPLNLLNELQLPGKKAKASILDFYTNQHLFKVVLAMGCVWFTVSYV
                     SLTLSLKMKDFGLDIYFIQVVPCITAVPARLCCILLLEYFGRKWSLNLTLSLVTFTCL
                     SLLFVPEELKSTTILMLVLGEFSMAGTVSIFFIYTAELLPTILRSTGLGMVSIAWTAG
                     AISSLAIFKQTKTQLPIFFCCLCCILALCFSSLVPETGNQPLRDSIEYCSRDSLEHKD
                     KSKDSSKVLMAEESMCDVAADSVLTKNTMFNAMTLKSETDSFLNMALEVPNRESPVQL
                     PEDHPS"
     exon            128..640
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            641..744
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            745..899
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            900..1068
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            1069..1189
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            1190..1284
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            1285..1499
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            1500..1608
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            1609..1803
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
     exon            1804..2927
                     /gene="Slc22a14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttccaagga tatggttggg tctggacaac agtcagggtg accgaattgt catccacttc
       61 aagacacttt tgagaagagg agaggaccaa ggtgatttcc tacaccagcc cagaagacat
      121 acacaagatg acggaagaac agaactccaa cacagagttc ggatcccagg attccaggga
      181 ctcccaccgg catgagctat cctatccctc ccagaactgg tccttggaga tgctgttacg
      241 aagattgaag gccttggatg ataggaggga cgacaagttt gccagcgtcc tgggtgccat
      301 cggggagttt ggcacgttcc agtggaggct ggtggccctc accttcatcc ccagtatcct
      361 gtcaaccttc ttcttgctct ctcaccactt cttgctcaca gctcagaggc cctactgtaa
      421 caccagctgg atcctgcaag tgggccccaa cctcacggag gacgaacagc tgaacctgac
      481 tgtgccccga gcacccaacg gcagtttcct gacatgcctc atgtacatac ctgtgccgtg
      541 ggatctagac tctatcgtcc attttggcct caattataca gaaacatgca aacacgggtg
      601 gatctatcct ttcgctcaca cgcgctcttt gaccaacgag tttgacctgg tgtgtggcaa
      661 tgagccacac gaggaaaacg ggcagactgt gttcctgtca ggcatcctga cagggtctct
      721 tctcttcggg ttcttaagcg acaagttggg ccgctatcca atcatcctgc tgtctctgct
      781 ggggatcctc atcttcggct tcgggacagc ctttgtgaac agcttttatc agtatctgtt
      841 cttccgcttt tttgtggccc aggcctctgt gggctacgcc atctgcagtg tctctttagt
      901 catggagtgg ctggtgggtg agcaccgcgc ccaagccatc attctccagc actgcttctt
      961 caccataggg gtcatattgc tgacggggtt tgcttacaaa attaaccact ggagactgct
     1021 gttcctactg ggcggagtgc ctatgtttcc ccttatctgc aacatctggg ttctccaaga
     1081 gtccccacgg tggctgatgg tgaaaggaaa ggtggaagaa gccaagaagg tgctgtgcta
     1141 tgcggctgag gtgaacaaga agaccatccc tttaaatcta ctgaatgagc tacagctgcc
     1201 aggaaagaag gcaaaggcct ccatcctgga cttctatacc aatcagcacc tcttcaaggt
     1261 ggtcttggcc atgggatgtg tgtggtttac tgtcagttac gtcagtctta cactgagcct
     1321 caagatgaag gactttgggt tggacattta cttcatacaa gtggtcccct gcatcacggc
     1381 agtgccagcc cgtctgtgct gtatccttct cctggagtat ttcgggagga agtggagcct
     1441 aaacctgact ctctccctgg tcaccttcac atgcttgtct ctccttttcg tccccgaaga
     1501 gctgaagtca acaacaatcc tgatgctcgt gcttggagaa ttcagcatgg cgggcactgt
     1561 ctctatattc tttatctaca ctgccgagct cctgcccacc atcctcaggt ctacaggtct
     1621 gggaatggtg tctatcgcct ggacagctgg ggccatttca tctctggcca tcttcaaaca
     1681 gaccaaaacg cagctgccca tcttcttctg ctgcttgtgt tgcatcctgg ccctgtgctt
     1741 ctcctccctg gtgccagaaa caggaaacca gcctctccgt gacagcatag agtactgttc
     1801 aagagactcc ctggagcaca aggataagag caaggattcc tctaaggtgt tgatggctga
     1861 ggagtcaatg tgtgatgttg cagctgattc tgtactgaca aagaacacca tgtttaatgc
     1921 catgactctc aagtcagaga cagacagctt cctcaacatg gccttggagg tacccaacag
     1981 ggaatctcca gtccagcttc ctgaggacca cccttcctag agcactttgg attggagttt
     2041 agtatgggta tggggccatg ggtacacagc ctcgaattct agacccagtc tggtatgtgg
     2101 gaagagtctg tccctccaag gccagccctc gggatccaaa aataattcct tctgaaggag
     2161 gtgctgactt gtgattcact ccaataaaat atcatgttgg tcttgagatg gccaggtcaa
     2221 ggttgactgt gtcatgacaa cccagaggtt gtggcctgga caggtacggg atggtggtca
     2281 gataggtaat ggaggctttt caggatcttt ggctaaattc tcaggggcag cagctaactc
     2341 tggatggagt gggtgtgggg tgggcgacat ctctgaggtc cagagatgga acaggagcac
     2401 cagtcacccc ttctagccca gccatcagct caagtcccag cgaaggacag aattcatggg
     2461 ggtttggatg gagaaggaat gagaactact cattgcctgg ggccgtcctt agccttcccc
     2521 ttgatatcat ggcctgcccc atcctgagag atgctctcaa tgatggctcc aataaagttg
     2581 acctctggtt tccaccaccc caaggaaaag aaagcccctg ggctcttcag tgttaactgt
     2641 caacctgaca ccatagagac tcccctggga atgggtctct gggcatgccc acagggaagt
     2701 atagccatca ggctagctag ggcagggaga cttgtctgcc gtgtatggta gcattccttg
     2761 agttgggccc tgagctacaa gacaagggga gcattagctg agcagtgacc agtgactcgt
     2821 ccctttctgc ttcctgacta tggatgtcgt ggagtcatct gtctcaagct cctgccacga
     2881 taaacagtaa cctcaaactg agatggaata aactgtgttt ccctgaa
//
