LOCUS       XM_039094222            2010 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus solute carrier family 18 member A1
            (Slc18a1), transcript variant X5, mRNA.
ACCESSION   XM_039094222
VERSION     XM_039094222.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2010
                     /gene="Slc18a1"
                     /gene_synonym="CGAT; VMAT-1"
                     /note="solute carrier family 18 member A1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 74 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:25693"
                     /db_xref="RGD:3693"
     CDS             477..1451
                     /gene="Slc18a1"
                     /gene_synonym="CGAT; VMAT-1"
                     /codon_start=1
                     /product="chromaffin granule amine transporter isoform X4"
                     /protein_id="XP_038950150.1"
                     /db_xref="GeneID:25693"
                     /db_xref="RGD:3693"
                     /translation="MLQVVLGAPQRLLKEGRQSRKLVLVVVFVALLLDNMLLTVVVGA
                     PFGSVMYEFVGKSSPFLILAFLALLDGALQLCILWPSKVSPESAMGTPLLTLLKDPYI
                     LVAAGSICLANMGVAILEPTLPIWMMQTMCSPEWQLGLAFLPASVAYLIGTNLFGVLA
                     NKMGRWLCSLVGMVAVGISLLCVPLAHNIFGLIGPNAGLGFAIGMVDSSLMPIMGYLV
                     DLRHTSVYGSVYAIADVAFCVGFAIGPSTGGVIVQVIGFPWLMVIIGTINIIYAPLCC
                     FLQNPPAKEEKRAILSQECPTETQMYTVQKPTKEFPLGENSDDPSSGE"
ORIGIN      
        1 aaaccagaac agcctagtgc ctctttgctt aggaaaaata cacttcctct gtcctcccca
       61 gccctggccc tgtctgcctt tgacgcagag agctaagggt ctaaaggaaa cctgttggag
      121 gttccaatta agtctttgtg gacatagggc gcgtgcgatt gcaaacacac acacacacac
      181 acacacacac acacacacac acacacacac acacacagat aacaggcagc aataaatcca
      241 tcagcacatc cactttcaga gaacagagtc tctgctgtct tgccaacggc tgctccttcc
      301 tctctgagtg cctcacatca agataagcta gaagtgagct tcactggacc aggcagactt
      361 cttctcctat aaaggtgaca gaagaccaca tttgtcaagg ggtcttccta agccctggga
      421 ggagaagccc ccaccatctc actccctacc cagcccagcc tcctgcagcc cttgccatgc
      481 tccaggttgt tctgggtgct cctcagcggt tgctgaagga aggaaggcag tcccgcaagc
      541 tggtgctggt ggtggtgttc gtggctctgc ttctggacaa catgctgctc actgtggtgg
      601 tgggagcacc tttcggaagt gtgatgtatg aatttgtggg caagtcctca ccattcctca
      661 tcttggcctt cttggcactt ctggatggag ctctccaact ttgcatcctg tggccttcga
      721 aagtgtctcc tgagagtgcc atggggactc cgcttttgac gcttctcaaa gacccttaca
      781 tcctggtagc agcaggttcc atctgcttgg ccaacatggg tgtcgccata ctagagccca
      841 cgctgcccat ctggatgatg cagaccatgt gctcccccga gtggcagcta ggtctggctt
      901 tcttgcctgc tagtgtggcc tacctcattg gcacgaacct ctttggtgtg ttggctaaca
      961 agatgggtcg gtggctgtgc tcccttgttg ggatggtggc agtaggtatc agcttgctct
     1021 gtgtacctct ggctcacaat atttttggtc ttattggccc caatgcaggc cttggctttg
     1081 ccataggaat ggtggattcc tctctgatgc ccatcatggg atacctggtg gacttacgcc
     1141 acacctctgt gtatgggagt gtctatgcca tcgccgatgt ggccttttgt gtgggctttg
     1201 ctattggccc atctactggg ggtgttatcg tacaggtcat tggctttcct tggctcatgg
     1261 tcatcattgg taccatcaac atcatttatg ctcctctctg ctgcttcctg cagaacccgc
     1321 cagctaagga ggagaagcgt gcaattctga gccaggaatg ccccacagag acccagatgt
     1381 acacagtcca gaagcccaca aaggagtttc cactaggaga gaacagcgat gatcctagca
     1441 gcggggagta actgcggagg gcgatatctg cgcctcacat ctacagggac cagtctacta
     1501 cagattcaat aattttcact ttcctctcct ccaggccact gccttcctcc cttcttattg
     1561 atacctttcc tttactcacc tgtaagtgca acccaccact ctccctctgt gctttgacac
     1621 cacccatggc ccactttttg tgggaggaca gtgctatttc ctgccaggcc aaagcgaagc
     1681 tgattaaagc tgagttgtga caagttctgc aaggggtgac tcacttcctg caggcaggac
     1741 tgaacaatgt gcctgcgaaa tcagggggac aaatgacaag cctgcctttc ttctctgatt
     1801 gttttttttt ttttgacata ttaccaatat gtcctaaaat ttgacttgtg tcctgtgaaa
     1861 tgctttcccc ttattttttc cagtttagct tctatacata cgggtttttg cttattttat
     1921 gtgctaaaat tgtttacctt cattaagtga ggccttccta ctttcttcat cgcccaattg
     1981 agaggaaata aacaactttc ttaggcttga
//
