LOCUS       NM_001415133            3903 bp    mRNA    linear   ROD 18-FEB-2024
DEFINITION  Rattus norvegicus solute carrier family 16, member 6 (Slc16a6),
            transcript variant 3, mRNA.
ACCESSION   NM_001415133 XM_008768375
VERSION     NM_001415133.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Higuchi,K., Sugiyama,K., Tomabechi,R., Kishimoto,H. and Inoue,K.
  TITLE     Mammalian monocarboxylate transporter 7 (MCT7/Slc16a6) is a novel
            facilitative taurine transporter
  JOURNAL   J Biol Chem 298 (4), 101800 (2022)
   PUBMED   35257743
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Price,N.T., Jackson,V.N. and Halestrap,A.P.
  TITLE     Cloning and sequencing of four new mammalian monocarboxylate
            transporter (MCT) homologues confirms the existence of a
            transporter family with an ancient past
  JOURNAL   Biochem J 329 (Pt 2) (Pt 2), 321-328 (1998)
   PUBMED   9425115
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000220.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001415133.2.
            
            On Dec 21, 2022 this sequence version replaced XM_008768375.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-61                JACYVU010000220.1  51271578-51271638   c
            62-300              JACYVU010000220.1  51262381-51262619   c
            301-444             JACYVU010000220.1  51258269-51258412   c
            445-573             JACYVU010000220.1  51256779-51256907   c
            574-1386            JACYVU010000220.1  51252958-51253770   c
            1387-3903           JACYVU010000220.1  51249235-51251751   c
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..3903
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /note="solute carrier family 16, member 6"
                     /db_xref="GeneID:303772"
                     /db_xref="RGD:735117"
     exon            1..61
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /inference="alignment:Splign:2.1.0"
     CDS             21..1637
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /note="isoform 2 is encoded by transcript variant 3;
                     monocarboxylate transporter 7B; solute carrier family 16
                     (monocarboxylic acid transporters), member 6; solute
                     carrier family 16, member 6 (monocarboxylic acid
                     transporter 7); monocarboxylate transporter 6"
                     /codon_start=1
                     /product="monocarboxylate transporter 7 isoform 2"
                     /protein_id="NP_001402062.1"
                     /db_xref="GeneID:303772"
                     /db_xref="RGD:735117"
                     /translation="MKLPARHQSEMSERSRMTQKNSKLCSRANVYTQVPDGGWGWVVA
                     ASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTN
                     RFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYF
                     DKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRP
                     IIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQE
                     VRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLG
                     ISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFT
                     FATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLA
                     GPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHR
                     GKALQDIPEDFLEMDLGKCEPRAHMKMDPV"
     exon            62..300
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /inference="alignment:Splign:2.1.0"
     exon            301..444
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /inference="alignment:Splign:2.1.0"
     exon            445..573
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /inference="alignment:Splign:2.1.0"
     exon            574..1386
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /inference="alignment:Splign:2.1.0"
     exon            1387..3903
                     /gene="Slc16a6"
                     /gene_synonym="MCT 6; MCT 7; Mct7B"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaccctctg gattttcctc atgaagttgc ctgcgcgtca ccagagcgaa atgtcagaga
       61 gatcaagaat gacccagaag aactcgaagc tttgttccag ggccaatgtg tatacccaag
      121 tgcctgacgg aggatggggc tgggtggtag ctgcttcctt tttcttcatt gaagtcttta
      181 cctatggcgt cattaagtcg tttggtgtct tcttcaatga cttgatggac agttttgacg
      241 aatctaacag caagatctca tggataatat cgatatgcgt attcataatg acattcacag
      301 ctcccctctc cacaatcctg accaaccgct tcggacatcg gctggtagtg atgggagggg
      361 ggctcctcat cagcgtggga atgattgctg cctccttctc ccagagggtc taccagatgt
      421 acatctccat agggatcgtc tctggtttgg ggtactgctt tagtttcctc ccgactgtga
      481 ccattctgtc gcagtacttt gacaaaaggc gttcgatggt cactgcggtt gcttctacgg
      541 gagagtgctt tgcgatgttt gctttcgcac cagctatcac ggccctgaag gagcacatcg
      601 gctggagata cagccttctc ttcgtgggcc tgctgcagct gaatgtcatg gtctgtggcg
      661 ccttgctaag gccgattatc atcaaagggc caggctcacc gaaagcgatc cctctggagc
      721 cccgcagaga agttcagtac atgcttgaaa acgagaaaac acggacctca atcgactcca
      781 tcgactcagg ggtcgagctg actacctcac ccaaaaatgt gcctagtgaa gctaaaagag
      841 agcaggaagt cagggtggaa cagcagcaga ccctggtggt cggccccaag cacagccaga
      901 agagagctcc gttgctggac ttctccatct tgaaagacag aagcttcatc tgttacacgc
      961 tgttcggcct cttcgccacc ctgggcttct tcgcgccttc cctgtacatc atccctctgg
     1021 gtatcagtct aggcatccac cctgaccgcg ctgcattctt actgtccacg atggccattg
     1081 cggaagtgtt cgggaggatc gggatggggc ttgtcctcaa cagagagccc attcgcaaga
     1141 tctacatcga gctcatatgc gtcattttac tgacggtgtc tctgttcgcc ttcacctttg
     1201 ccaccgagtt ctggggcctc atgctgtgta gtgtgttctt tggcagtatg gttgggacca
     1261 taggagggac ccacatcccc ttgttggctg aggatgatgt cgttgggatc gagaagatgt
     1321 catctgccgc aggagtctat gtcttcattc agagcatttc agggcttgcg ggaccgcccc
     1381 tggcaggcct gctggttgac cagagcaaga tctacagcag ggccttctac tcctgtgcag
     1441 ccggcatggc actggctgcg gtgtgcctcg ccctggtaag gccctgtaaa aagggcctgt
     1501 gccagaatcc tcactcaggt gaaaaccaga cagacgggca tcgcgggaag gcgttacagg
     1561 acataccgga agactttctg gaaatggatc ttgggaaatg tgagcccagg gctcatatga
     1621 aaatggatcc cgtgtgacgc gttttttttc aggtggtagc ttctatgtcg cctgggtaac
     1681 ggagcccctg gggatactgg gaggggcagg cgccaaccac tagaccacac cttcgaatct
     1741 gcatgaaggg aatgcctgtg ggacagcaga accggcagct gtcccctccc ctcagtccct
     1801 tttgcttgtt ctttaagcca aaaccaaaac aaccaaacac tctccataca ggcatccagt
     1861 cctattcggt agcaatacag agatgagcag gaaaagacct ggtggacatg ccaacaagaa
     1921 agcagtacca cgaactgaca aaggactgct gctgttaaca gcactcaccc ctgtgacaaa
     1981 ctaccatttc ataaagtgac atccagccca agtcacaggg gtgaatcagc cattctaaaa
     2041 agaccaaaaa aaaagaaaaa aaaaaaaaaa aggaaaaaaa aaaacaaaca aaaaaccaca
     2101 cacacacata caatcttgaa ccattaaaga tgttgctaat cttcagaaat aagaggtgaa
     2161 tcgtttttaa acgatttgaa aaagataagt aatcttagta agtttacatt gacggattgt
     2221 ggcctctgag ttttctaaac accgcatgca aagaaagcag tgcttttaag gccgagcatt
     2281 tgattaatat gcaaaaaaaa caaattaagc acgtatgaca acttgaactt cataaacagg
     2341 atcactgccg ttcttcacgg ccaatcgtta tcaccacaag agtttcagta gacatgtggg
     2401 attgtcttcg tatttcctac ttcgtatttc ataatacaag aaataaatga ctgttgtgtc
     2461 tctaatttaa accactattt atttttaagt tattctagga cgattaaagc aatcaaatga
     2521 aagggccggc gagatggctc agtaggtaaa ggtgcttgct accaagtccg atgacctgag
     2581 ttcagttcct aggaaccaca cggaaggaag agaaccaact tccgggagtt gtcctctgac
     2641 ctccacacat atgctaggac acgcaggcgg ccacacacac atacacagaa tatttaaatg
     2701 taaaaaagaa aagctaataa tcaaaataaa gaaaaggcga tctgagatac acacaacata
     2761 tttttacctc tgttctgcag ctccgtaact gcttcggaga gctttctcgg gtctcgattt
     2821 ccgcagccca ggttgtaacg attctccggg ggttgttaaa ggcaacgttg tgctatttgg
     2881 aggggggaca acaggaggca aatggcctct gcttctgcat tgtccgctaa gaatacttga
     2941 ggctcttctt cggtcagaat tctacttcat tgaattgtta gaacatttcc agtggcttgt
     3001 ctgctgtcgt tgtcatcgtt gttgttaatt gttgttcgat ctgtaactgc ggaagcattt
     3061 cttcattgcg cctgaaatgg gagacactca gacgttacaa gttgcagttt acatcttctg
     3121 tagaacttgg tcgccctaag ttgccatggg tacctggtca ctgctgtcag tgagttaaac
     3181 tacatgtgtc tataatgttc tgcactctag cagttctctg taaagggggt agggtgagga
     3241 tgaggggggc tgcttcctca cctgtttgac agcgtctccc cgacagggtg gtcgacgctc
     3301 gcttcttgac ctttcctcat ctttcctgtt aaggacaact cagggggaaa cgtagaacaa
     3361 gcctagtccg gttacaggta cacacaagct tgaatctctt ctctgcactg agacggaagt
     3421 ggtgaggtgc gtcaccaccc gccacgttta atacagcatc ttatcagcca tagaactagt
     3481 aggacaatct gtaaaacttg ggggagggcg agtgactgga agacaacgtg tctgtccgaa
     3541 agagcagact cgagtgaaat gagatggatg tggcaagctc tgtggggctg cccccgagaa
     3601 ataaatgctc taggctcgag ggtcggtttg caggtgttat ctgactttag cactttacaa
     3661 gcgattttgt actacgaatg ttcgagatgg tttaatattt ataactggtt tctgaggggt
     3721 ctgctctcgt ctactgcatg agacaggaaa acgtgtgtcc ttttcagtct gtcaacaatc
     3781 aggggtgcca atgttgggaa gggtggggaa aacaaaaacg aaaaccacca caggatcgct
     3841 gatctgtatg agtgacgttc tggtacttct agatttacaa taaatttgtg gctttttatt
     3901 taa
//
