LOCUS       NM_001192015            1716 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 15, member 5 (Slc15a5),
            mRNA.
ACCESSION   NM_001192015 XM_578419
VERSION     NM_001192015.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jul 17, 2010 this sequence version replaced XM_578419.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.2485107.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-343               JAXUCZ010000004.1  172702551-172702893 c
            344-563             JAXUCZ010000004.1  172696509-172696728 c
            564-733             JAXUCZ010000004.1  172683884-172684053 c
            734-957             JAXUCZ010000004.1  172670161-172670384 c
            958-1144            JAXUCZ010000004.1  172663876-172664062 c
            1145-1327           JAXUCZ010000004.1  172652165-172652347 c
            1328-1459           JAXUCZ010000004.1  172643842-172643973 c
            1460-1568           JAXUCZ010000004.1  172616604-172616712 c
            1569-1716           JAXUCZ010000004.1  172609293-172609440 c
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q44"
     gene            1..1716
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /note="solute carrier family 15, member 5"
                     /db_xref="GeneID:502918"
                     /db_xref="RGD:1564925"
     CDS             1..1716
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /codon_start=1
                     /product="solute carrier family 15 member 5"
                     /protein_id="NP_001178944.1"
                     /db_xref="GeneID:502918"
                     /db_xref="RGD:1564925"
                     /translation="MFVTGFIINDEKAPLPLHGGPERQKTVGHLGCFRVGICSLLVEL
                     CERFTFFEVVCNMIPFCTRRLGCYNHQAAILNLCFIGASVLTPVFMGWLSDSKYLGRN
                     KLVYIAVFLHFLGTALLSVLAFPSEDFYGGTSPASNMPMKKRAGLFHVALLTLCLGTG
                     GIRAVVCLPDACGHWEQESKKPMSFCNWASWSMNLNTAVVFLGVSSIQLLGSGAVMIL
                     LPSLSVFTASVTLYMTYCDLIYEPENHCSLPTVSRAFARVLKTRCLLYCHLGRAGSSW
                     LARAMAKQGVCHCELQEEETENVFSALLSLFSFQLIYRMCLTQIPSGYYLQTMHSNRT
                     LGGVPLPIALMNAISLLPLLTLGPFMDFFSNCLLPSKRDGPFLSVCIIAGNICAAFSV
                     AVAGFLEIHRKLAQEQSPSGKLSSVSSMACVYLVPQYVLLGVSEVLVNPAVSTVTRRV
                     VPSTFRRASMTCLTLFHGSAYFAGALLIELVYLISEGNWFPNTLNKGNLESFFFVLAS
                     LTLLNILGLWRVLPRCCNLNHFNAQRIHGNNCEETLLLSEKSLKFYGSTQETSSSIDL
                     RETAF"
     exon            1..343
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            344..563
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            564..733
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            734..957
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            958..1144
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            1145..1327
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            1328..1459
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            1460..1568
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
     exon            1569..1716
                     /gene="Slc15a5"
                     /gene_synonym="RGD1564925"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtttgtta caggcttcat cataaatgat gagaaagcac ccttaccctt acatggtggc
       61 cctgagcggc agaagacggt gggacatttg gggtgtttcc gagttggaat ctgctcgctt
      121 ctggtggagc tgtgtgaaag gttcactttc ttcgaagttg tctgcaacat gatccccttc
      181 tgcacaagga ggcttggctg ctacaaccac caggcagcca ttctcaactt gtgcttcatt
      241 ggagcctccg tccttacccc tgtgtttatg ggatggctct cggatagcaa gtacctcggg
      301 aggaacaaac tggtttacat agccgtgttt ctacatttcc taggcactgc cttgttatca
      361 gtgcttgctt ttccctcgga ggatttctac ggaggcactt ctcctgcgtc taacatgccc
      421 atgaagaagc gggccgggct gtttcatgta gcgctgctga ccctctgcct gggcacagga
      481 ggaataaggg ccgtcgtttg tctgccggat gcgtgtggcc attgggagca ggagtcaaag
      541 aagccaatgt cattttgtaa ctgggcctcg tggtccatga acctgaatac cgctgttgtc
      601 tttctgggag tctcaagcat ccagctcttg gggtctgggg ccgttatgat cctgcttcct
      661 tctctgtccg tgttcaccgc atcggtaact ctttacatga cgtactgcga cctgatctat
      721 gagccagaga accattgctc cctcccgacc gtctccaggg cgtttgctag ggtcctgaaa
      781 acacgctgcc tgctgtactg ccatcttggg cgagccggat caagttggtt agcccgtgcc
      841 atggcaaaac aaggtgtttg ccactgtgaa ctccaggagg aagagacaga aaatgtcttc
      901 tccgcccttt tgtctctctt cagcttccag ctcatataca gaatgtgcct tacgcagatt
      961 ccttcgggat attatcttca gaccatgcat tccaacagga ccttgggcgg agtccctctg
     1021 ccaattgcgc taatgaacgc catcagcctt ctgcccttat tgaccctggg tccatttatg
     1081 gatttcttca gcaactgtct acttccctct aagagagacg gaccgttctt gtcagtgtgc
     1141 attattgctg gtaacatttg tgcagccttc tctgtggcag tggccggctt cctagaaata
     1201 cacagaaaac ttgcccagga gcagtctcct tcaggcaaac tttcctctgt ttcctccatg
     1261 gcctgcgtct atctggttcc gcagtacgtg ctgcttggag tgtctgaggt cctggtaaac
     1321 ccagcggtct ccacggtgac acgcagagtc gttccaagca ccttcagaag agcttccatg
     1381 acgtgtctga ccctgttcca tggatccgcc tatttcgccg gggcactgct gatagagttg
     1441 gtttatctca tctcagaagg caattggttt ccaaacacat taaacaaagg caatttggag
     1501 agcttcttct tcgtgctggc atccttgacg ctgttgaaca tcctgggact ctggagggtt
     1561 ttgccgagat gttgtaatct aaatcatttt aatgcccagc gcatccatgg aaataattgt
     1621 gaagaaactc ttctcctctc tgaaaagtct ctcaagtttt atggcagtac acaggaaaca
     1681 tcttcgagta tcgatcttcg ggagacagcc ttctga
//
