LOCUS       NM_153625               2431 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 12, member 8 (Slc12a8),
            mRNA.
ACCESSION   NM_153625
VERSION     NM_153625.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Nov 29, 2020 this sequence version replaced NM_153625.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB024430.1, SRR26643288.45852.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-94                JAXUCZ010000011.1  80770822-80770915   c
            95-241              JAXUCZ010000011.1  80751067-80751213   c
            242-433             JAXUCZ010000011.1  80745264-80745455   c
            434-665             JAXUCZ010000011.1  80737853-80738084   c
            666-779             JAXUCZ010000011.1  80699066-80699179   c
            780-867             JAXUCZ010000011.1  80678581-80678668   c
            868-955             JAXUCZ010000011.1  80676649-80676736   c
            956-1102            JAXUCZ010000011.1  80666378-80666524   c
            1103-1724           JAXUCZ010000011.1  80659079-80659700   c
            1725-1822           JAXUCZ010000011.1  80636914-80637011   c
            1823-1940           JAXUCZ010000011.1  80633487-80633604   c
            1941-2001           JAXUCZ010000011.1  80626462-80626522   c
            2002-2431           JAXUCZ010000011.1  80622000-80622429   c
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q22"
     gene            1..2431
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /note="solute carrier family 12, member 8"
                     /db_xref="GeneID:266733"
                     /db_xref="RGD:628730"
     exon            1..94
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..2164
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /note="cation-chloride cotransporter 9; solute carrier
                     family 12 (potassium/chloride transporters), member 8"
                     /codon_start=1
                     /product="solute carrier family 12 member 8"
                     /protein_id="NP_705889.2"
                     /db_xref="GeneID:266733"
                     /db_xref="RGD:628730"
                     /translation="MAQRSPQELFHEAAQQGALARSQPWWKIQLFMWEPVLFGTWDGV
                     FTSCMINIFGVVLFLRTGWLVGNTGVLLGLLLVSFVILVALITVLSGIGVAEHGWMGS
                     GGVYSMISSVLGGQMGGTVGLLYVFGQCVAGAMYLTGFAESISDLLGLGNIWAVRGIS
                     VAVLLALLGINLAGVKWIIRLQLLLLSLLAVSTLDFVVGSFTHLDPEHGFIGYSPELL
                     QSNILPEYSPGESFFTVFGVFFPAATGVMAGFNMGGDLREPADSIPLGSLAAVGISWF
                     LYIIFAFLLGAVCTREALRSDFLIAEKVSLVGFLFLLGLYISSLASCMGGLYGAPRIL
                     QCIAQDKVIPALAFLGNGKGPNKTPVAAICLTSLVTMAFVLVGQVNVLAPVVTINFML
                     TYIAVDYSYFALSMAHCGLAQSPEPMPRQGPDALHCSEHLLQDKAPSYGSDTPAGSLS
                     EGTLLEFTKDMDQLLQPIGGLESQPRSRDVNQVLKSQKHKCKKDAKQTLQDSFLLDAE
                     SPLSFSMGASERLSVASCGEQESYQNQQTSRSESHDHLVPDLCTQPRANGEDFFLKCR
                     LQEQQVQRRPSAFYVCMCNPWVSLLGALASLLIMFVIQWLYTLASMGVAALVYLYIGQ
                     ASPGLYLGSASNFSFFQWMKSFLVPSCRSLRSTREQIILAPSPAKVDMAMTQLTQDNA
                     DFATRDRYHRSSFLSREQLMPPY"
     exon            95..241
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            242..433
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            434..665
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            666..779
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            780..867
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            868..955
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            956..1102
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            1103..1724
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            1725..1822
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            1823..1940
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            1941..2001
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
     exon            2002..2431
                     /gene="Slc12a8"
                     /gene_synonym="Ccc9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagtggtct ccccatctag agtatcagaa cctcacttcc tgaagaatgg cccagaggtc
       61 tccacaggaa cttttccacg aggcagccca gcagggcgcc ctggcccggt cccagccctg
      121 gtggaagatc cagctgttca tgtgggagcc agtactattt gggacctggg atggtgtgtt
      181 cacatcctgc atgatcaaca ttttcggggt tgtccttttc ttgaggaccg gctggctggt
      241 gggaaacacg ggtgtactcc tgggcttgct ccttgtgtcc tttgtcatcc tcgtggccct
      301 catcaccgtg ctgtctggca ttggcgtcgc agagcatggc tggatgggca gtggcggcgt
      361 ctactccatg atctcctccg tgcttggtgg acagatggga ggcactgtag ggctgctgta
      421 tgtatttgga cagtgtgttg caggtgccat gtacctcact ggctttgccg agtccatctc
      481 agatctgctg ggtctcggga acatctgggc tgttcgagga atctccgtgg cggtgcttct
      541 ggctttgctg ggcatcaacc tggcaggcgt caagtggata atccgcctcc agctgctgct
      601 gctgtccctg ctggctgtct caaccctgga ctttgtggtg ggctctttca cccacctgga
      661 cccagagcat ggctttattg gatactcccc agaactgcta cagagcaaca tcctgcctga
      721 gtacagcccc ggggagtcat tcttcactgt gtttggggtg ttcttccccg cagctacagg
      781 agtcatggct ggcttcaaca tgggaggaga cctgagggag cctgctgaca gcatacccct
      841 aggctcccta gcagctgttg gtatctcgtg gtttctctac atcatctttg ccttcctgct
      901 tggtgccgtc tgtacccgag aggccctccg ctctgacttc ctgatagctg aaaaggtatc
      961 tctggttggt ttcctcttcc tgttgggctt gtacatctca tccctggctt cctgtatggg
     1021 gggactctat ggagcccccc ggatcctgca gtgcatcgcc caggacaaag tgattccagc
     1081 tctcgccttt ctggggaacg ggaaagggcc aaataaaaca cccgtagcag ccatctgcct
     1141 gaccagcttg gtgaccatgg cctttgtcct tgtgggtcag gtgaatgttc tggcgcccgt
     1201 ggtcaccatc aacttcatgc tgacctacat cgcagtggac tactcttact tcgccctctc
     1261 catggctcac tgcggcctcg cccagtctcc tgagcccatg cccagacaag gcccggatgc
     1321 tctgcactgc tctgagcacc tgctccagga caaggctccc agctatggct cagacacccc
     1381 tgccggaagc ctctctgaag gtaccctgct ggagttcacc aaggacatgg atcagctcct
     1441 ccagccaata gggggacttg agagtcagcc taggtcaaga gacgttaacc aggtcctaaa
     1501 gagtcagaag cacaagtgta agaaagacgc caagcaaacc ctacaagata gcttcctctt
     1561 ggatgctgag tctcctttgt ccttttctat gggggcctct gagaggttgt cggttgcctc
     1621 ctgtggagag caagagtcct atcagaacca gcagacttct aggagtgaat cacatgacca
     1681 tcttgtccct gatctgtgta cccagcctag agcgaacgga gaagatttct ttctgaaatg
     1741 cagacttcag gaacagcagg tccagaggag accaagtgct ttctatgttt gcatgtgtaa
     1801 cccctgggtc tccctgttag gggctcttgc atccctgctc atcatgtttg tgatccagtg
     1861 gctctatacc ctagctagca tgggtgttgc tgcccttgtg tacctctaca ttggccaggc
     1921 cagtccaggc ctttacctcg gatcagcatc aaacttcagc tttttccaat ggatgaagtc
     1981 cttcttggtc ccctcctgca ggagcctgag atccacccgg gagcaaatca tcttggcacc
     2041 gtccccagcc aaggttgaca tggcaatgac tcagcttacc caggacaatg cagacttcgc
     2101 cacccgagat cgttaccacc gctcttcctt cctgagtcgg gaacagctga tgcctcccta
     2161 ctagaccctc gctggagccc tcctttctag aagctgctgt ggagctgagg gacccaaacc
     2221 tcagaacctt tggaagttgc ttctaccaat aagaaatccc aagactggtc ttcccaccac
     2281 agccttggac accggaaatc acattccaga cactaggcat ggccatggct tccacgtgct
     2341 tgaggagccc acaggccacc aggataatgt aaaaaaacaa aatgagagtt cttattctaa
     2401 gagccataat aaatacttct ttttaatttt a
//
