LOCUS       NM_001010948            3661 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 10, member 7 (Slc10a7),
            mRNA.
ACCESSION   NM_001010948 XM_214660
VERSION     NM_001010948.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3661)
  AUTHORS   Ashikov,A., Abu Bakar,N., Wen,X.Y., Niemeijer,M., Rodrigues Pinto
            Osorio,G., Brand-Arzamendi,K., Hasadsri,L., Hansikova,H.,
            Raymond,K., Vicogne,D., Ondruskova,N., Simon,M.E.H., Pfundt,R.,
            Timal,S., Beumers,R., Biot,C., Smeets,R., Kersten,M., Huijben,K.,
            Linders,P.T.A., van den Bogaart,G., van Hijum,S.A.F.T.,
            Rodenburg,R., van den Heuvel,L.P., van Spronsen,F., Honzik,T.,
            Foulquier,F., van Scherpenzeel,M., Lefeber,D.J., Mirjam,W., Han,B.,
            Helen,M., Helen,M., Peter,V.H., Jiddeke,V.K., Diego,M., Lars,M.,
            Katja,B.H., Jozef,H., Majid,A., Kevin,C. and Johann,T.W.N.
  CONSRTM   CDG group; CDG group
  TITLE     Integrating glycomics and genomics uncovers SLC10A7 as essential
            factor for bone mineralization by regulating post-Golgi protein
            transport and glycosylation
  JOURNAL   Hum Mol Genet 27 (17), 3029-3045 (2018)
   PUBMED   29878199
REFERENCE   2  (bases 1 to 3661)
  AUTHORS   Dubail,J., Huber,C., Chantepie,S., Sonntag,S., Tuysuz,B., Mihci,E.,
            Gordon,C.T., Steichen-Gersdorf,E., Amiel,J., Nur,B.,
            Stolte-Dijkstra,I., van Eerde,A.M., van Gassen,K.L., Breugem,C.C.,
            Stegmann,A., Lekszas,C., Maroofian,R., Karimiani,E.G., Bruneel,A.,
            Seta,N., Munnich,A., Papy-Garcia,D., De La Dure-Molla,M. and
            Cormier-Daire,V.
  TITLE     SLC10A7 mutations cause a skeletal dysplasia with amelogenesis
            imperfecta mediated by GAG biosynthesis defects
  JOURNAL   Nat Commun 9 (1), 3087 (2018)
   PUBMED   30082715
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3661)
  AUTHORS   Bijsmans,I.T., Bouwmeester,R.A., Geyer,J., Faber,K.N. and van de
            Graaf,S.F.
  TITLE     Homo- and hetero-dimeric architecture of the human liver
            Na-dependent taurocholate co-transporting protein
  JOURNAL   Biochem J 441 (3), 1007-1015 (2012)
   PUBMED   22029531
REFERENCE   4  (bases 1 to 3661)
  AUTHORS   Godoy,J.R., Fernandes,C., Doring,B., Beuerlein,K., Petzinger,E. and
            Geyer,J.
  TITLE     Molecular and phylogenetic characterization of a novel putative
            membrane transporter (SLC10A7), conserved in vertebrates and
            bacteria
  JOURNAL   Eur J Cell Biol 86 (8), 445-460 (2007)
   PUBMED   17628207
  REMARK    GeneRIF: Molecular characterization and expression analysis of a
            novel member of the SLC10 family, SLC10A7, previously known as
            C4orf13, is reported
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Sep 14, 2022 this sequence version replaced NM_001010948.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.918585.1,
                                           SRR26360190.1250025.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-329               JAXUCZ010000019.1  46311425-46311753   c
            330-412             JAXUCZ010000019.1  46304949-46305031   c
            413-549             JAXUCZ010000019.1  46295934-46296070   c
            550-625             JAXUCZ010000019.1  46289957-46290032   c
            626-664             JAXUCZ010000019.1  46243086-46243124   c
            665-700             JAXUCZ010000019.1  46164458-46164493   c
            701-784             JAXUCZ010000019.1  46134120-46134203   c
            785-950             JAXUCZ010000019.1  46125188-46125353   c
            951-1002            JAXUCZ010000019.1  46123823-46123874   c
            1003-1076           JAXUCZ010000019.1  46115410-46115483   c
            1077-1222           JAXUCZ010000019.1  46092571-46092716   c
            1223-3661           JAXUCZ010000019.1  46087440-46089878   c
FEATURES             Location/Qualifiers
     source          1..3661
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..3661
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /note="solute carrier family 10, member 7"
                     /db_xref="GeneID:291942"
                     /db_xref="RGD:1564388"
     exon            1..329
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..1252
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /note="Na(+)/bile acid cotransporter 7; solute carrier
                     family 10 (sodium/bile acid cotransporter family), member
                     7-like"
                     /codon_start=1
                     /product="sodium/bile acid cotransporter 7"
                     /protein_id="NP_001010948.1"
                     /db_xref="GeneID:291942"
                     /db_xref="RGD:1564388"
                     /translation="MRLLERVRKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSY
                     IAVATIFFNSGLSLKTEELTSALVHLKLHLFIQVFTLAFFPTTIWLFLQLLSVTSINE
                     WLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPVLLLLFLGS
                     SSSVPFTSIFSQLFMTVVVPLVIGQIVRRYIKDWLERKKPPFGVVSSSVLLMIIYTTF
                     CDTFSNPNIDLDKFSLILILFIIVSIQLSFMLLTFVFSTRNNSGFTPADTVAIIFCST
                     HKSLTLGIPMLKIVFAGHEHLSLISLPLLIYHPAQILLGSVLVPTIKSWMVSRQKGVK
                     LTRPTV"
     exon            330..412
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            413..549
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            550..625
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            626..664
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            665..700
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            701..784
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            785..950
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            951..1002
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            1003..1076
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            1077..1222
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..3661
                     /gene="Slc10a7"
                     /gene_synonym="P7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcggcgctc agcgaggctt tcccgtcact ggatactact actcccagcc cgcctcggag
       61 ccgcccgagc cacccctcgg tctttcgttt aagagtagca atttgacttg ctctgctgca
      121 tgtctggagg gaccgaggaa agtgtggaga cgccccgggg atttagggat cgcaatttgg
      181 aaatcaagcc agccaaacaa ataaacaaaa cccacccgcc ctaacaaata tgaggctgct
      241 ggagagggtg aggaaagaat ggttcatggt cgggatagtg gtggcgatcg gcgccgctaa
      301 gctggagccg tcggtcggag tgaacggggg accactgaag ccagagataa ctgtgtccta
      361 cattgctgtt gcaacgatat tcttcaacag tggactgtca ttgaaaacag aggagctgac
      421 cagcgcactg gtgcacttga agctgcatct cttcatccag gtcttcacgc ttgccttctt
      481 cccaacaaca atatggctct ttcttcagct cctatcagtc acgtccatca acgagtggct
      541 tttaaaaggt ttgcagacag taggctgcat gcctccccct gtgtcttctg ctgtgattct
      601 aaccaaggca gtcggaggaa atgaggcagc tgcaatattt aattcagcat ttggaagttt
      661 tttgggcatt gttgtgactc cagtgctcct gctgcttttc ctcggctcat cctcttccgt
      721 gccttttaca tcgattttct ctcagctctt tatgacggtg gtggttcctc ttgttatcgg
      781 acagatcgtc cgaagataca tcaaggactg gctcgaaagg aagaaaccgc ctttcggcgt
      841 ggtcagcagc agcgtgcttc tcatgatcat ctacaccacc ttctgtgaca ctttctccaa
      901 cccaaacatt gacctggaca aattcagcct catcctcata ctgttcataa tagtctccat
      961 tcaactgagc ttcatgcttc tgactttcgt cttctccaca cggaataact cggggttcac
     1021 accagcagac acagtggcta tcatcttctg ctctacacac aagtccctca ccttggggat
     1081 cccgatgctg aagatagtgt ttgccggcca tgagcatctc tcgctgatat ccctgccctt
     1141 gcttatctac cacccggctc agatcctcct gggaagtgtg ttggtgccaa ctataaagtc
     1201 ttggatggtg tcgaggcaga agggagtgaa gctgacgagg ccaacagtgt gactgcggcg
     1261 gccccttcct ggagaagtgt gcatttgtac agggttgtac atacagggat cccgaggccc
     1321 cgtccttgtg aatgttgctt tcatgcctat tttatttttt tacagaaaaa atatgatata
     1381 cctgtttaag tgccttaaaa atgtttctga caagagcgtt atttccaaaa catactctgt
     1441 tggtcactgc catgggcagt acagtatttt ggacttaatt tttcccccta aggcagacaa
     1501 aaaagttcta gtaagggaca gaaagctaac aggttttctt cgtactgcct tttgtgcaag
     1561 actgtaatag cactataacg ttggaaatga ggtcacaccg tccagatacc acctcccttc
     1621 tgtgacatca gaagactcta aagtcgcatt cccacacttg gatgcactgc gtgcttcttt
     1681 gtttctaaga ctgtgatgtg ccacttcctt atcagctcag caggggatgt gggtctccga
     1741 gatgctgcga agcatgaggt ctcgttccct gacaccgacc tctagacagc accgttagtc
     1801 cccacactcc tgactccctt cagtaccagc acaagagtgg ggagtagggg agtgcagctt
     1861 aaatttatta taagctgctt caaagaaagt cctgatgtgg gtgttgggtt gggatgtttg
     1921 cagtcatacc tccgtgtgct tctcctctct ctcccctaat tccatagttt cccatgtcac
     1981 ttgcacactc acaacagccc agtgcacaaa cgtctcggtc aatcggagag ccgcagaaat
     2041 caacagtgga ttgcattccg aggccaagca ctctcctgtt acacagctcc aactcttctg
     2101 ttggcaagac acggcctgtc acacccttta attaagcgca cttgagacct ctgagtcgat
     2161 ttatgaatga gaacgtcctt tcctcatttg acaatgttaa caacatccct taagaaatca
     2221 aatcctatca ccttaggagt cagagaaaat aagcaggagg ccatgggcct gagctaatgt
     2281 tacatgtcca cactgctggt caggcagaac aggctggcac agaagaccaa ggcctcccgc
     2341 tcaccgggct gtccaacggg atggtccagg aactaggcag cagctctcca aaggactgtc
     2401 tgacacagcc ttcagtggcc cgaggagccc aagccgagcc caaatagcac gtgaaacagc
     2461 atactagacg ttggtgggag gccttccctg tgctccccta acgctgggcg ttagtgattt
     2521 aacaggtgcc atgggtctca cccggccttg ctgcctcccc ggcagctgcc tttggtgttg
     2581 gtagcggtaa ctgtgatacc acaatgaatc attccttcag aatcccctgg gctcaacagt
     2641 ggtgttggtt tatgttatgg ttagctttgg tgttgtagat gatggtagct tatgttatgg
     2701 ttaccgtggt tagcgctgat ggcatggcgt tagcaccagg tctttcgtgt cagtgtctcg
     2761 ggacctcata actctgagca gagctcctac actggtgtca ggccttactg cccatactgc
     2821 ccagcctgtg gggcacactg ctggggacca ggaggcagaa agtggggcac actgctgggg
     2881 acccggaggc ggggagtctg tttggtaaat gggccgcttc catggagcac aaaggttttc
     2941 aagtctcacc cctacaacct tggggcctta gaggatgtgg gcactgcctg cctgccagag
     3001 ttgtagactc agaacctttc ctgtcatttg aacactggtc tccccaccga ctcatctacc
     3061 tctctgtgcg gcacctgcag taggtgtgac ttcgacgaag ttcaactgaa aacgctatgg
     3121 taacatttta tcttctgctt taaaaatgtg ttttcaagta agctgatgat ttacgtcatg
     3181 agtttttcga gctttagtaa catgtttgta gctactcctt ttacacaaat gtgatagcag
     3241 ttttcgtgct aaggaaaaaa ataaaatcaa aatttgcttt aatttatgtt cattaggatt
     3301 taactgtcag cttaaaatac tttcctgtgt ttatgcactg tcagtttcta ttctatattg
     3361 tttgtccaac aaacttttaa aaggaataca ttagatagac ttatgtttac tcattttttc
     3421 cccctggaat ttttttttta atggcagaaa ttttaacgaa tggtaccgca gtctacatgt
     3481 tacaaatgtt aaggttctgt gaatttttta aattcttcct tattctgttt taaatggcca
     3541 cacctctggt tgacgctcag tgtttatgct aaataccaaa ttttttcaag gagatggcta
     3601 agtgatgaag tgggttattt ataatgagtg gaaaataaaa aaaaataatt ctatgagtaa
     3661 a
//
