LOCUS       NM_198049               2032 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 10 member 6 (Slc10a6),
            mRNA.
ACCESSION   NM_198049 XM_223165
VERSION     NM_198049.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Geyer,J., Godoy,J.R. and Petzinger,E.
  TITLE     Identification of a sodium-dependent organic anion transporter from
            rat adrenal gland
  JOURNAL   Biochem Biophys Res Commun 316 (2), 300-306 (2004)
   PUBMED   15020217
  REMARK    GeneRIF: Cloning and analysis of transport function of Soat.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            On Sep 30, 2022 this sequence version replaced NM_198049.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ583503.1, SRR26360190.2285562.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-431               JAXUCZ010000014.1  6385575-6386005
            432-550             JAXUCZ010000014.1  6395888-6396006
            551-639             JAXUCZ010000014.1  6396609-6396697
            640-812             JAXUCZ010000014.1  6401107-6401279
            813-970             JAXUCZ010000014.1  6405009-6405166
            971-2032            JAXUCZ010000014.1  6406471-6407532
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..2032
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /note="solute carrier family 10 member 6"
                     /db_xref="GeneID:289459"
                     /db_xref="RGD:727800"
     exon            1..431
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..1167
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /note="solute carrier family 10 (sodium/bile acid
                     cotransporter family), member 6; solute carrier family 10
                     (sodium/bile acid cotransporter), member 6"
                     /codon_start=1
                     /product="sodium-dependent organic anion transporter"
                     /protein_id="NP_932166.1"
                     /db_xref="GeneID:289459"
                     /db_xref="RGD:727800"
                     /translation="MSADCEGNSTCPANSTEEDPPVGMEGQGSLKLVFTVLSAVMVGL
                     VMFSFGCSVESRKLWLHLRRPWGIAVGLLCQFGLMPLTAYLLAIGFGLKPFQAIAVLI
                     MGSCPGGTVSNVLTFWVDGDMDLSISMTTCSTVAALGMMPLCLYVYTRSWTLPQSLTI
                     PYQSIGITLVSLVVPVASGIYVNYRWPKQATFILKVGAAVGGMLLLVVAVTGVVLAKG
                     WNIDVTLLVISCIFPLVGHVMGFLLAFLTHQSWQRCRTISIETGAQNIQLCIAMMQLS
                     FSAEYLVQLLNFALAYGLFQVLHGLLIVAAYQAYKRRQKSQYRRQHPECQDISSEKQP
                     RETSAFLDKGAEAAVTLGLEQHHRTAELTSHVPSCE"
     exon            432..550
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /inference="alignment:Splign:2.1.0"
     exon            551..639
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /inference="alignment:Splign:2.1.0"
     exon            640..812
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /inference="alignment:Splign:2.1.0"
     exon            813..970
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /inference="alignment:Splign:2.1.0"
     exon            971..2032
                     /gene="Slc10a6"
                     /gene_synonym="Soat"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgctggct gctgatgttt ctttgggttc ccgtgttcta attcatgagt cgagatgagc
       61 gcagactgcg agggcaactc cacctgccct gccaacagca cggaggaaga cccacccgtg
      121 ggaatggagg gacaggggag cctgaagctt gttttcacag tcctgtcggc tgtgatggtg
      181 ggtctggtca tgttctcctt tggatgttca gtggagagtc ggaagctctg gctgcacctc
      241 agaagaccct ggggcatcgc agtgggcctg ctttgccagt ttgggctcat gcctctgaca
      301 gcttatctgc tagccattgg cttcggtctg aaaccattcc aagctattgc cgtcctcatc
      361 atggggagct gccctggggg caccgtctct aatgtcctca ccttctgggt tgatggagat
      421 atggacctca gcatcagcat gacgacctgc tccacagtgg ctgctctggg aatgatgccc
      481 ctctgcctct acgtctacac ccggtcctgg actcttccac agagcctcac catcccgtac
      541 cagagcatag gaattaccct tgtgtccctg gttgttcctg tggcctccgg catctatgtg
      601 aattataggt ggccaaagca agcaacattc attctcaagg tcggggctgc tgttggcggc
      661 atgctcctcc tggtggtggc agttaccggc gtggtcctgg caaagggctg gaacatagat
      721 gtcactcttc tggtcatcag ctgtattttt cccttggtcg gccatgtcat gggcttcctg
      781 ctggcgttcc tcacccacca gtcttggcaa aggtgcagga cgatttccat agagaccgga
      841 gcacagaaca tccagctgtg cattgccatg atgcagctgt ccttctctgc tgagtacctg
      901 gtccagctgt taaacttcgc cctggcctac ggactcttcc aagtgctgca cgggctgctc
      961 attgtcgcag catatcaggc atacaagagg aggcagaaga gtcaatacag gagacagcac
     1021 ccggagtgcc aagacatcag ctctgagaag cagcccagag agaccagtgc cttcttggat
     1081 aaaggggctg aggctgctgt aactctgggg ctagagcagc accacaggac tgctgaactg
     1141 accagtcacg ttccttcatg tgaatagtgg gagacccgga actgtttggt cctccatctt
     1201 cctccgcagc cagtgaagac taggtgtggt tggcagtaag cagcaggcct cgccccgcaa
     1261 aactgtgctc ccgttgtgga atgtaacccg agagagagag agagagagag agagagagag
     1321 agagagagag agagagagaa caccgtacag aggagacatc actcacgctg cgggacagag
     1381 cgtccacggg cttcttgact tcaggcagat gctctggaga actagggaag agacactaag
     1441 attagctgca ctgatgtgac tcttaaggga ttgagcctca tttaattttg attatgtgta
     1501 taatgcgagc gggcgagctc tttctcttga gagaaacaga caggtgccca gaatctccaa
     1561 actgtagatg tgcccgagtc tccaaaagaa gagacacatg tgcgtccgtt caagtattct
     1621 gagcacccaa tcaccagaaa agcctgcagc ttctttcctg tgtgttttga tagtcgatca
     1681 gtgattgtct cagaaccctt ttacacttct gtgttaccta cctcattctt tagaacagtg
     1741 actgagtcca agtgttgcat aatataggac tgtaatttat tgaaggcttc tttcttagtc
     1801 ttcagatacc ttccagctca gggctgctgt gaacccctgg cccttactcc gtgtcccagt
     1861 aggctcgctc cttcctgccg ctccagtggg tgggcccaca gctcctcaga atcccagaca
     1921 gactgttctg cctcagaggg gcgttgtgct tcactcccac cagtcttaag aagtgatttc
     1981 tcttcgtttt gacttgagag aacatctcat taaaatcatg atctcagaat ta
//
