LOCUS       NM_001107214            4791 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus SLAIN motif family, member 2 (Slain2), mRNA.
ACCESSION   NM_001107214 XM_001076917 XM_223362
VERSION     NM_001107214.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4791)
  AUTHORS   van der Vaart,B., Manatschal,C., Grigoriev,I., Olieric,V.,
            Gouveia,S.M., Bjelic,S., Demmers,J., Vorobjev,I., Hoogenraad,C.C.,
            Steinmetz,M.O. and Akhmanova,A.
  TITLE     SLAIN2 links microtubule plus end-tracking proteins and controls
            microtubule growth in interphase
  JOURNAL   J Cell Biol 193 (6), 1083-1099 (2011)
   PUBMED   21646404
REFERENCE   2  (bases 1 to 4791)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473981.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_223362.4, XM_001076917.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4791
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p11"
     gene            1..4791
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /note="SLAIN motif family, member 2"
                     /db_xref="GeneID:305310"
                     /db_xref="RGD:1311593"
     exon            1..630
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     CDS             242..2065
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /codon_start=1
                     /product="SLAIN motif-containing protein 2"
                     /protein_id="NP_001100684.1"
                     /db_xref="GeneID:305310"
                     /db_xref="RGD:1311593"
                     /translation="MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQSAGLL
                     GPGSPARAGVSTPSSGAASPRGFPLGLGAKASGGAGSGPRRTSSEDLRDATSLLAAGE
                     GGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPS
                     PDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYSSPYSPNASSPYSSGFNSPSST
                     PVRPPIVKQLILPGNSGNFKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDV
                     TDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDSMHH
                     AVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRASPQPMISRLQQPRLS
                     LQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQP
                     QASATSQRLKSLPRTPLKAKQVLPTPSTNRVPSPGKFRSPAAPSPLALRQPVKAFSNH
                     GSGSGSQETTQFTQTTSSPGPPVVQNTAPANPSSNINSATLTRPAGTAAMRSGLPRPS
                     APSAGGIPVPRSKLVQPVRRSLPAPKTYGSMKDDSWKDGCY"
     exon            631..779
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     exon            780..944
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     exon            945..1106
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     exon            1107..1466
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     exon            1467..1604
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     exon            1605..1682
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     exon            1683..1998
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
     exon            1999..4791
                     /gene="Slain2"
                     /gene_synonym="RGD1311593"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagggaagat ggcggccgag gccggatatt ggcgccgcct cccccagtcg cggagccggc
       61 gcagatgagg cggctcggct ggggccagcg gcgcttcgca acccgagccg gggggaccct
      121 ggcggtgggg cctggccctg ctctatgccg gcgcctcggc tagcgtgagc ggtggcggta
      181 acgcctctct cccccgtgct tcccctgcgg cttgggagtc ggagcgggcg gcgcggccgg
      241 catggaggac gttaactcca atgtgaacgc ggaccaggag gtgcggaagc tgcaggagct
      301 ggtgaagaag ctggagaagc agaacgagca gctgaggagc cgctcaggag ccgtgcagag
      361 tgcaggcctc ctcgggccgg gcagccctgc tcgggccggc gtgtccaccc cctcctcggg
      421 cgcggcgtcc cctcggggct tcccgctggg cctgggcgcc aaggcgagcg gcggggcggg
      481 ctcgggcccg cgacggacca gcagtgagga tctgcgggac gccacctcct tgctggcggc
      541 tggtgagggc ggcttgctgg acgaggtaga accgctgcgg cccgacgagc tggagcgctt
      601 gtcaggctgg gaggaggaag aagagagctg gttgtactca tcaccaaaga aaaaactcac
      661 accaatgcag aaatctgtta gtccattagt ttggtgcagg caagttttgg attatccaag
      721 tcctgatgtg gagtgtgcta aaaagtccct tatccacaaa cttgatcaaa ctatgtcagc
      781 tctcaagagg caaaatttat acaataatcc tttcaactct atgagttact caagccctta
      841 tagtccaaat gccagtagcc cttacagcag tggcttcaac tctccatcct caacaccagt
      901 gcgacctccc atagtcaagc agcttatact tcctggaaat tcaggtaact tcaagagctc
      961 atcagataga aaccctccac tcagccctca gtcctctata gatagtgagt taagtgcttc
     1021 agaattagat gaagattcaa ttggatccaa ctataagcta aatgacgtaa ctgatgtgca
     1081 gattctagcc cggatgcagg aagaaagtct ccggcaagag tatgcagcca ccacctctcg
     1141 tcgcagctca ggctcatctt gcaactccac gaggcggggc acgttcagcg atcaggaact
     1201 ggatgcacag agcttggatg atgaagacga cagcatgcac catgccgtgt accctgctgt
     1261 taataggttt tctccatccc cacggaattc accccgacca tctcctaagc agtcgcctcg
     1321 aaattcacct cgttcacggt ctcctgcccg gggaatagaa tacagtagag catccccaca
     1381 gcctatgatt agccgcttgc agcagcctcg cctttccctc caaggccatc ccacagattt
     1441 acagacaagc aatgttaaaa atgaagaaaa acttagacgc agtcttccaa acctatcccg
     1501 aacatcgaac acacaggttg actccgtgaa aagcagtaga agtgactcca attttcaagt
     1561 gccaaatgga ggaatacctc gaatgcagcc tcaggcttca gccacttctc aaaggctgaa
     1621 aagtttgcct cgtactcccc tcaaagccaa acaggtgctt ccaactccat ctacaaacag
     1681 agtaccttct ccaggcaagt tccgctcccc tgcagcacca tctccattgg ctcttcggca
     1741 accagtgaaa gcgtttagta accatggctc tggttctggt agccaagaaa ctacacagtt
     1801 cacacaaacc acctcctcac ctgggcctcc cgtggtgcag aacacagccc cggcaaaccc
     1861 ttccagcaat atcaacagtg ccactctaac cagacctgca gggacagctg caatgagaag
     1921 tggcctgccc cggcctagcg ccccttctgc ggggggcata ccagtgcctc gcagcaagct
     1981 tgtgcagcct gttcgaagat cattgccagc tcctaaaacc tatggtagca tgaaagatga
     2041 cagttggaaa gacggctgtt actgaccagc agagacaagg atacagacgt ccacagcttc
     2101 atggacaccc cttcaccaag ctgaaaccaa cttttatatg cagactcttc agtgagactc
     2161 ttgggtttgc acactcccag cctctctgtc ttaatagcac aagtgacgga gacgaggaag
     2221 cagcacttta atgccacgtg acatcagatg tgtttggtag tcatgcagtc actctccatg
     2281 gggtcgccta gttttgttca cttgaagcac ggttcatttt attatttgac agaggccaat
     2341 atctgggcaa atacctactg gatgccaaag agaatgccca tttgtaaaga gagaacctgt
     2401 gtacatggga agatggtgaa cttaggctat ccaaaacctc acgttcaacc tactttactg
     2461 tacaaatagt atcaataaat actgtgttaa caagaactaa tattctgact aattagactg
     2521 ttttcttagt ccttcaggat acagtaaatt ataaagattg ggagagagaa aggacagacc
     2581 tgagctaaag actcaaaacg tgctactacc tgtgtttagg aaggttttat acattacttt
     2641 tgcagactcc gtgggaaaag gctcttagct tttaaacata gctcacatag ccacgtgcag
     2701 atggtgtcac agtgcacgcc caccgcccta catctcagac ttctgtgtac ctgtttttga
     2761 tgccagaagg gctcactctc tttctaactt tacagttcct ggctcaggac agatggcctt
     2821 tgctgttgaa gccaacttac tcacatgctg gtttctgtct gtcacagagc tgaaagagct
     2881 gtttccacac caggtttcta tgatgtcaaa gaacagttac gtgtctttgt ccttgacaaa
     2941 gcaacacctc agaacttaga gcctggagta gaaccatatc caagaggagg gaaatctatg
     3001 cactaactgt aaacatctct gtgatggcag ctgtactgct gctcgtaagc ggcagcgcgg
     3061 tctgttatgt ggtagtcagt ccactccaaa ctgaatgact gtatgaagtc cctttttaaa
     3121 accctgtccc tttaacttag attctgcctt acatcagcgt tttcattgtt tggttacaaa
     3181 gcatccaact ctactttgct aaatacttgc tctttaaatg gcatatgtgt gtatataacc
     3241 cttggaatta gctgtttggt ttttcagatt attatcaaac tataactcga gctgacttct
     3301 cattttttat aatgaggtct gttttttaaa tacttaatac agttttaaat gttggcagtt
     3361 gggtcacata gaggcggggt atttgaactc gtttcctgta agtagaggat gttctataaa
     3421 gtgcacgtag aaatacagag aggaagggaa gggaagtttc ctgctcagga aagcatcgat
     3481 ttgatgataa cagagacccc gtctgccatg gctgacgctg gcccagcagg gagacatgga
     3541 gcgcagacag cacgagtgcc agacctgtag tatagggtgg aagacattga agggatgtga
     3601 gggaaggagg ctgccccgtc gggtgccccg tcatccatga tgctggactg agaacagctg
     3661 tttcttccag aaagacggag cgcgtgcttt ggcctgctga gagccagaga gcagcctcgg
     3721 tctctgcaga gcctcacgtg cacacagcaa gcaggtctct gttcagtgtg acggttggaa
     3781 ataataaatg ctgcaatcta ataatttaaa agaaccttta atgaaccatc tatcacattt
     3841 ttaagttaga taatcagttt caaaaggaac attcaggtta tttaacattg tttttaaatg
     3901 gctgcatcag aacaaatatc tatttttttt taattaaact atttcatcac ttgtttaaaa
     3961 atgtattttg gatctgagtt tggtgatatt atttcagctg ctgctgcact accacagatt
     4021 attattggct tttagtttcc taaagagaaa aattgccttt ttactagaaa gcctttgtgt
     4081 attgccagtt tttctgtttg ggaaaatcta aggatttact gtggttagtc gtacagaaga
     4141 aatgtggatt tgatgaacta gtgcctatga ttttaactta tgtttgatat atagtagtag
     4201 ggtcataaat gttgattatt ttgtgccaac agcccagaat tgtcacttgt atgtcagcag
     4261 aaactatgac ctctgcttcc aaagttattt aattttctca gtgtttggat gttatttttt
     4321 gtaagtgtgt taataaaagt gtaaagaatt ggaaaaatat aaatattctt aactcaagca
     4381 tttgctgaat catttttcta caaaacttgt ttgtacaaaa ctctgtgaag agttgacttt
     4441 tctcagtttt cataccctgg aaatcacatt ttgtaaaact ggggaccatt cataattgtc
     4501 agatactttt ttaaattatc tcagaacatc acttttatat atagatataa aaattttttt
     4561 gaaagcaaag aaaattaaat acatatgtgt ccccagatat ttgtacaact ctaggatgat
     4621 ctagactgtg tatgttcaga tcgacgtaac tcactgtaca gatgcccagc tttgacagat
     4681 gatgcatggt ccttagagca catgaagttt gatttgcaaa catttctata gctgcacttg
     4741 taatatgtgg ttgcctcctt aataaacagc ctgaccatga tgtttattat t
//
