LOCUS       NM_178097               1914 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus src-like adaptor (Sla), mRNA.
ACCESSION   NM_178097
VERSION     NM_178097.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Alifragis,P., Molnar,Z. and Parnavelas,J.G.
  TITLE     Restricted expression of Slap-1 in the rodent cerebral cortex
  JOURNAL   Gene Expr Patterns 3 (4), 437-440 (2003)
   PUBMED   12915308
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Dec 2, 2020 this sequence version replaced NM_178097.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY217759.1, SRR26643298.40336.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760393 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                JAXUCZ010000007.1  100473610-100473684 c
            76-173              JAXUCZ010000007.1  100444196-100444293 c
            174-273             JAXUCZ010000007.1  100436299-100436398 c
            274-360             JAXUCZ010000007.1  100434970-100435056 c
            361-464             JAXUCZ010000007.1  100432370-100432473 c
            465-596             JAXUCZ010000007.1  100429576-100429707 c
            597-744             JAXUCZ010000007.1  100426177-100426324 c
            745-1914            JAXUCZ010000007.1  100424169-100425338 c
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q33"
     gene            1..1914
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /note="src-like adaptor"
                     /db_xref="GeneID:338477"
                     /db_xref="RGD:631373"
     exon            1..75
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..958
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /note="src-like-adapter protein 1; SLAP-1"
                     /codon_start=1
                     /product="src-like-adapter"
                     /protein_id="NP_835198.2"
                     /db_xref="GeneID:338477"
                     /db_xref="RGD:631373"
                     /translation="MLCRLPGPSTSRGEKEMGNSMKSTPAPLERPLSNTEGLESDFLA
                     VLNDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLF
                     EGLGRDKAEELLQLPDTKIGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYI
                     SPRLTFQCLEDLVTHYSEVADGLCCVLTTPCLAQNTPAPTAQPSPCTSPGSPVTLRQK
                     TFDWKRVSSLQEGPEGAENPLRVDESLFSYGLRESIASYLSLTGDDSSNFDRKKKSLS
                     LIYSGSKRKSSLFSAPQYFED"
     exon            76..173
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
     exon            174..273
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
     exon            274..360
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
     exon            361..464
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
     exon            465..596
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
     exon            597..744
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
     exon            745..1914
                     /gene="Sla"
                     /gene_synonym="Slap1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgaaataag atccttctaa gcgagcggag gctttctacc tttccagtca tctttgtggc
       61 ccccatgctc tgcaggcttc caggaccttc cacatctcga ggagagaaag agatggggaa
      121 cagcatgaaa tccacacctg cacctttgga gagaccacta tccaacactg agggacttga
      181 aagtgacttt ctggctgtgt tgaatgacta cccgtctcct gacatcagcc ccccaatatt
      241 ccggagggga gagaaacttc gtgtgatttc tgatgaaggg ggctggtgga aagccatttc
      301 tctcagcacc ggccgggaaa gttacattcc agggatatgt gtggccagag tgtatcatgg
      361 ctggctgttt gaagggctgg gcagggacaa ggctgaagaa ctgctgcagc tgccagacac
      421 aaagattggt agcttcatga ttcgagagag tgaaacaaag aaaggtttct actcactgtc
      481 agtaaggcac aggcaggtga agcattaccg catcttccgc ctgcccaaca actggtacta
      541 catctcacca aggctcactt tccagtgcct agaagacctg gtgactcatt attctgaggt
      601 ggctgatggt ctatgctgtg tgcttaccac accctgcctg gcacagaaca cacctgctcc
      661 aacagctcag ccatcacctt gcaccagtcc tggttcacct gtcaccttgc gccagaagac
      721 ctttgactgg aagagggtat ccagtttgca ggaaggtcca gagggagcag agaacccact
      781 cagagtggac gaatcccttt tcagctatgg tcttcgggaa agcatcgcat cctacctgtc
      841 cctgacaggg gatgacagca gcaacttcga ccggaagaag aagagtctct ccttaatata
      901 cagtgggagc aaacgcaaga gttccctttt ttcagcaccc caatactttg aagattaatg
      961 ccctggctgg tacacaaaag acaaaggcct tgactgccac ctgaggcttt atggaggtca
     1021 gagttcctcc ttggttacct caggtcttcc aggaatcaag ggaaatcaca aagactgtct
     1081 ttaaatactg atcagagaaa ctcctccctg ttgtctaaac agtatttcag agctacatca
     1141 tgtttgaatc atgatgaaat ggggcagtac ttcaaagaac tgtacatgta tgagtgtgtg
     1201 tatgtagaac agaatactct tgcaggagga ttagaagact gattccagtt cccagtccaa
     1261 atgttccttc tctgagactc catcgagaga atctatctga gaaagaacat gagaaagatg
     1321 gccttcttag atctccagaa tgacctctac ctggagcaaa actaccttta tcggtccaat
     1381 gagaccttta gggtgtgtct cttctctttc taaaggacca gtgacactaa acaatattca
     1441 gtggggctta tagctctgag ccaagtggaa tattcagcat tcaggggtac caaagccatg
     1501 tgaacaggag tagatagatg gccatgctaa gtcacaggag agtatagggt agtgagggac
     1561 caaacaggag agcaagaagg cagctctact gcaaaaactt atcagacagt tttgactcat
     1621 ccagctgcca aggttctgtg ttctagaacc cccactgctc atgcctatca gaagatgcct
     1681 gggtgaaata ctgtgctgag gtcaaatggt aataaatgag gctcgtctaa tgaatagaat
     1741 tccttaatgc tgggattcaa tgggtcagag agataagcag aacaacaaga tgtaactgtg
     1801 aatatgaaac aggaggaacc ctcagagtta caatgggctg aggacaagtg agggttaccc
     1861 aggtgctctg ttcccatgga tcgacaagga atacaaggct tgttggatca agta
//
