LOCUS       XM_008763957            1240 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus selection and upkeep of
            intraepithelial T cells 8 (Skint8), mRNA.
ACCESSION   XM_008763957
VERSION     XM_008763957.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008763957.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008763957.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1240
                     /gene="Skint8"
                     /note="selection and upkeep of intraepithelial T cells 8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins, and 68% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:689792"
                     /db_xref="RGD:1588696"
     CDS             1..1089
                     /gene="Skint8"
                     /codon_start=1
                     /product="selection and upkeep of intraepithelial T-cells
                     protein 7-like"
                     /protein_id="XP_008762179.2"
                     /db_xref="GeneID:689792"
                     /db_xref="RGD:1588696"
                     /translation="MMKPEFSYFSGLCVYFLFLQVTISSEKWMVTTPTRHVLARVGGQ
                     AELSCQVIPPQSVGYMEVRWFRSGHSQPVYLYRGGHSMSGEAAPEYANRTQFVKEAIG
                     EGKVTLRIHNISILDDGPYRCSFNDSGFIDVASMNLNVTAVGLETEIHVQAPDADGVI
                     VECNSGGWFPKPQMEWRDSNGETLRHSMKSYSQDEARFFHMKMALLTNRLQGNIICCI
                     FNPVTGEEKQTNIILANELFYEDHIWMKILVIIACIILFIISFLLLISCFCRRQGCAS
                     GYVSKCFCVFNSWPVQILNFLFCTGLLFGIYLPHRSRVSLSDPQFPLYNKWIKDLLFV
                     ILFLTVFFVLPIIALILRRLSPTCLNKQ"
ORIGIN      
        1 atgatgaagc ctgagttctc ttacttttct ggattgtgtg tgtactttct ttttctgcaa
       61 gtaacaattt cttcagagaa atggatggta actactccca caagacacgt attagctaga
      121 gtaggaggcc aggctgagct cagctgtcag gtgatcccac cacagagtgt ggggtatatg
      181 gaggtgcgct ggttcaggag tggccattcc caacctgttt acctatacag aggtggccat
      241 agcatgagtg gagaagctgc tcctgaatat gcaaatcgta cacagtttgt gaaggaggcc
      301 attggagaag gcaaagtgac cctccgaatt cataatatca gcattttgga tgatggacct
      361 tatcgatgtt catttaatga tagtggtttc attgatgtgg ccagcatgaa cctcaatgtg
      421 acagcagttg gattggagac agagatccat gttcaggctc ctgatgctga tggagtcata
      481 gtggagtgta attcaggagg gtggttccca aaaccccaaa tggagtggag agatagtaat
      541 ggggaaacac ttcgacactc aatgaaatca tattcacagg atgaagccag atttttccac
      601 atgaagatgg ctcttctcac aaacaggtta cagggcaaca tcatttgctg tatttttaac
      661 cctgtaacag gtgaagagaa gcaaacaaat atcatcctag caaatgaact cttttatgaa
      721 gaccatattt ggatgaaaat tttagttatc attgcatgca taatactctt catcatcagc
      781 tttcttctac tcatcagctg tttttgcaga agacaaggat gtgcatctgg atacgtgtct
      841 aaatgttttt gtgtgttcaa ctcgtggcca gttcaaatac tgaatttctt attctgtact
      901 ggactactct ttggtatata cttacctcac cggtccagag tctctctttc agatccccag
      961 tttcctttat acaacaaatg gataaaggac ttgctatttg tgatactttt tctgacagta
     1021 ttttttgtct taccaatcat tgccttaata ttaaggcgac tttcacccac atgtctgaat
     1081 aaacagtaga agaacaagga tgtcatcatg gacagcaaac caggactggg aaaggcccat
     1141 aaagtctcaa ccctatatag aaaacatccg agaaaaagct gggagcagga aagataattt
     1201 ccacaggaag gagctgccaa ctgattgtcc agtgtcaaaa
//
