LOCUS       NM_001400778            4436 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus SKI/DACH domain containing 1 (Skida1), mRNA.
ACCESSION   NM_001400778 XM_039096191
VERSION     NM_001400778.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000017.1.
            
            On Jan 27, 2022 this sequence version replaced XM_039096191.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760400,
                              SAMEA5760476 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-239               JAXUCZ010000017.1  85715137-85715375   c
            240-4436            JAXUCZ010000017.1  85710836-85715032   c
FEATURES             Location/Qualifiers
     source          1..4436
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q12.3"
     gene            1..4436
                     /gene="Skida1"
                     /note="SKI/DACH domain containing 1"
                     /db_xref="GeneID:680770"
                     /db_xref="RGD:1588196"
     exon            1..239
                     /gene="Skida1"
                     /inference="alignment:Splign:2.1.0"
     exon            240..4436
                     /gene="Skida1"
                     /inference="alignment:Splign:2.1.0"
     CDS             353..3100
                     /gene="Skida1"
                     /codon_start=1
                     /product="SKI/DACH domain-containing protein 1"
                     /protein_id="NP_001387707.1"
                     /db_xref="GeneID:680770"
                     /db_xref="RGD:1588196"
                     /translation="MGDLKSGFEEVDGVRLGYLIIKGKQMFALSQVFTDLLKNIPRTT
                     VHKRMDHLKVKKHHCDLEELRKLKAINSIAFHAAKCTLISREDVEALYTSCKTERVLK
                     TKRRRVGRALATKAPPPERAAAASPRPAFWKDKHQLWRGLSGAARPLPISAQSQRPGA
                     AAARPAAHLPQIFSKYPGSHYPEIVRSPCKPSLNYETAPLQGNYVAFHSDPAYFRSLL
                     CSKHPAAAAAAAAAAAAAAAAAAYYQAAGPQPKAATGAGGPVSLTYRCKRKRGGAKNC
                     LLAPHTGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGATCLERFHLVNSFCPPPHHH
                     HHHHHHHHHHHHRAQQPTPSHHPPHHHRPQPHLGSFPESCSSDSESSSYSDHAANDSD
                     FGSSLSSSSNSVSSEEEEEEGEEEEEEEEEEGGSGASDSSEISSEEEDSSTESDSSSG
                     SSQVSVQSIRFRRTSFCKPPSVQAQANFLYHLASAAAAAKPAAFEDAGRLPDLKSSVK
                     AESPEEWNLQSWAPKGAPVYCPASLGSCFPEIRNDRVSEITFPHSEISSTVKRTDLTV
                     NCQAEGASSPSPKTNNVFPQQRILREARKCLQATPTTHCAENSTMAARFLNNDSCGTA
                     ANSGKDSKIPHCPEFATDLPSPQTDPGVDAAAAAAAAAAAAAAAAAATKAESLCTDTG
                     DKTLPFLHNIKIKVEDSSANEDYEPDLITSELKWECNDTEGEFYSVTEKKEEDALVPT
                     AKEGFACPEKETPSLNPLAQSQGLSCTLGSPKPEDGEYKFGARVRKNYRTLVLGKRPV
                     LQTPPVKPNLKSARSPRPTGKTETHEGTLDDFTVLNRRKKVASNVASAVKRPFNFMAN
                     FPCPPSLIIGKDGDLWPAYSLNTTKDSQPPHKAHPIWKWQLGGSAIPLPPSHKFRKFN
                     S"
ORIGIN      
        1 acttcactct gtcattttat ttgtagctaa agcagcggcg ggaatagcag ctgcatttct
       61 tttctctttc tcccttcaca ttccattatc acagtgctcc aatggagaaa gaaggagtag
      121 cggggcccag gtactgatcc gcatcgagga ctcagaccaa cacactggca gatctgaaac
      181 cggatggtct tttccctctt ttttaaaaaa acgaaaacca aaaaaaaagc gagaatcaac
      241 aggatgcctt gagacacacg cagcatctgg cggaggatta acatacatac atgtgtatgt
      301 atgcgtcacg tatatattta ctgcaaatgg tggggatcat ttagtgcccg agatgggaga
      361 cctgaagtca ggtttcgaag aggtggatgg cgtgaggctc ggctacctca tcattaaagg
      421 aaagcaaatg tttgctctct cccaagtctt cacagatctg ctgaaaaaca tcccgaggac
      481 gaccgtgcac aagcgcatgg atcatctgaa agtgaaaaag caccactgcg atctggagga
      541 gttgcggaaa ctcaaagcaa tcaacagtat cgccttccac gcggccaaat gcacgctcat
      601 ctcccgggaa gacgtagaag cgctctacac ctcctgcaaa accgagcgtg tgctcaagac
      661 caagcgaagg agggtcggtc gggccctggc cacaaaggcg ccgccgccag agcgcgccgc
      721 cgccgccagc ccccgcccgg ctttttggaa ggacaagcac caactttggc ggggcctgag
      781 cggagccgcg cggcccctgc caatcagcgc gcagtcccag cgtccgggcg ccgccgccgc
      841 gcgccccgcc gcccatctac ctcagatttt tagcaaatac cctggctcgc actacccgga
      901 gatcgttcgc tcgccttgca aaccctcttt aaactatgaa actgccccgc tccagggaaa
      961 ctacgtcgct ttccactcgg accccgctta ttttcggagc ctgctgtgca gcaagcaccc
     1021 ggccgcagcc gcagccgccg ccgccgccgc tgccgccgcc gcagccgccg ccgcctacta
     1081 ccaggcggcc gggccccagc ccaaggcggc gaccggcgcg ggaggcccgg tgagcctgac
     1141 ctaccgctgc aagcgcaagc gcgggggcgc caagaactgc ctgctcgcgc ctcacaccgg
     1201 cgcccggcgc ctgctgctgc tgcccaggtc ctacaaagcc aaggcggcgg cggcggcggc
     1261 agcagcggcg gcggcggcgg cggcggccgc cggagccact tgcttggaga ggtttcatct
     1321 ggtcaacagc ttctgcccgc ctcctcacca ccaccatcac catcaccacc atcaccacca
     1381 ccaccaccac cgggcccagc agccaacgcc gagtcaccac ccccctcacc accaccggcc
     1441 gcagccccat ctaggaagct ttcccgagag ttgtagcagc gactccgagt ccagctccta
     1501 ctcggaccat gcagccaatg actcggattt tggctccagt ttgtccagct ccagcaactc
     1561 cgtgtcctca gaggaagagg aggaggaagg agaggaggag gaggaagagg aggaggaaga
     1621 ggggggcagc ggggcctctg attccagtga aatcagctcc gaggaggagg actcatccac
     1681 cgagtcagac tccagctccg ggtccagcca agtgtcagtg cagagcatcc gtttcaggcg
     1741 caccagcttc tgcaagcctc ccagcgtgca ggcgcaggcc aacttcttgt accatctggc
     1801 ctccgccgcc gctgcagcca aaccggctgc tttcgaggat gccggccgac ttcccgacct
     1861 caaaagtagt gtcaaagccg agtcgccaga ggagtggaat ctgcagagct gggctcccaa
     1921 aggggctccg gtgtactgcc cggccagcct ggggagttgt ttcccagaga taagaaacga
     1981 tagggtatct gagattacat tcccacactc tgaaatttcc agtactgtaa agagaactga
     2041 cctgacagtt aactgccagg cagagggggc ctcttcacct agcccaaaga caaacaatgt
     2101 atttccacaa caaagaatac tccgagaggc taggaaatgc ctacaagcaa ctcctactac
     2161 acactgtgca gaaaacagca caatggctgc taggttctta aataacgatt cttgtggaac
     2221 agcagcaaat tcaggaaaag attccaaaat ccctcattgt cctgaatttg ccacggattt
     2281 gccctctcct caaactgatc ccggagtgga tgcagcagca gcagcagcag cagcagcagc
     2341 agcagcagca gcagcagcag cagcaactaa agctgagagt ctctgcactg acacaggcga
     2401 caagacattg ccatttctgc acaatattaa aatcaaagta gaagacagta gtgctaatga
     2461 agactatgaa cctgatctta ttacaagtga gctaaagtgg gagtgcaatg atacagaggg
     2521 tgagttttac agtgtgactg agaagaaaga ggaggacgcc ttggtaccca cagccaagga
     2581 aggctttgca tgccctgaga aagaaactcc ttccttaaat ccactggctc agagtcaggg
     2641 cctttcatgc actttaggat ctccaaaacc tgaggatggg gaatataaat ttggtgccag
     2701 ggtgaggaaa aattaccgga cactagtact gggcaaacga ccagtccttc agacacctcc
     2761 agtcaaacca aatttgaaat cagctagaag ccctcgtcct acaggtaaaa ctgagacaca
     2821 tgaaggaaca ctggatgact ttacagtttt aaacagacgc aaaaaggtag ccagcaatgt
     2881 agcatcagca gtgaaaaggc cgtttaattt catggcaaat tttccttgtc caccatcact
     2941 cattattggg aaggatgggg atttgtggcc agcgtattcc ttaaacacca ctaaggattc
     3001 ccaacctcct cacaaggccc atcctatatg gaaatggcag ctgggcggtt ctgcaatacc
     3061 tcttccacct agtcacaaat tcaggaaatt taattcataa aaaaaatgtt ttggaagata
     3121 ttttctcgaa ccatattacc ttccttttgt tgtaagctgc acaggatggc ttgtaccaag
     3181 tccattaatg gtgttacacc ccttttggag tcctggttta tcgcattttg aagacagaaa
     3241 tcggattact tttttttttt cccctttgcg ggtttttttt ttttaagggt gggggcgggg
     3301 tgggagaagg gttggtttac acaccacaga ctacttcagg ctaaagactc aagtaaaact
     3361 cagttattat ggttagagct ggaacacttt actgtttcaa tgctaataat gcaccggtac
     3421 ctcaattcaa ctgctacaaa taaatgtcaa aaggttgaat aataaatgtt acaatgagcc
     3481 attaagttta tgcactagat ttcagacctg aaagtgtaac tggtattcag tgaaagtttg
     3541 ttaggttaca atgcttacac ggtgaggtag caagaagttt ctgtgagccc aaatgtaatt
     3601 tttctggagc tcttatttgt ggggtgtctt taaagagcaa accctcattc cctttccaag
     3661 agtacttgca cttaaatgtt tgattttttt ttttttaatg gaaagattgg ggcatgagtc
     3721 ctgactggat gctgatttaa aagctgcctc ttgtgtgaga agtaaaagaa atattttttt
     3781 ttaaggatgt gctttttttt tttctaaacc tttacagtca cttcttgcga ttggaaaagt
     3841 cccttctgtg ctctcaccca aacatttaaa ataggatgac tcttactgtg ttcctgctta
     3901 tcttctgatc tgaagataac tcttcaagct ttcaaaacaa ttaaaacatt tctctgaata
     3961 gcaggatgtt gagtggtcta actcatcaca gtgaccaagc agttaatata accgagaaaa
     4021 agaaaaagag tcataacacc ccaagtgaag aaaaaaaaaa acaaactgat ttcagggctt
     4081 tttggtatca gaactcaggc acttggattt tcttacctat gctttttctg catctctcta
     4141 agcttctgtt tcaggccatc ctgtgtatag aacaggagag tttctactgc aagtgacaat
     4201 cagaggtgac tctatatttg cacttaaaat caaagtagtc ccacatgcaa atggtctacc
     4261 ccttggtaag gccatgctgg tccgcccctt ggtaaagcca tgctggtccg ccccttggta
     4321 aggccatgct ggtgtactgt gttgtaaaga caagagcagt aaatcaaaac tatggaaatt
     4381 tgcactgtcg aaaagcttgc ttcagcttta ttttccatta aaaacactgt ttaaaa
//
