LOCUS       NM_001399810            1627 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus shieldin complex subunit 3 (Shld3), mRNA.
ACCESSION   NM_001399810 XM_039103965
VERSION     NM_001399810.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 14, 2022 this sequence version replaced XM_039103965.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643286.6195.1, FQ119335.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-343               JAXUCZ010000002.1  37035517-37035859   c
            344-1627            JAXUCZ010000002.1  37031045-37032328   c
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q13"
     gene            1..1627
                     /gene="Shld3"
                     /note="shieldin complex subunit 3"
                     /db_xref="GeneID:120101079"
                     /db_xref="RGD:41350418"
     exon            1..343
                     /gene="Shld3"
                     /inference="alignment:Splign:2.1.0"
     exon            344..1627
                     /gene="Shld3"
                     /inference="alignment:Splign:2.1.0"
     CDS             447..1214
                     /gene="Shld3"
                     /codon_start=1
                     /product="shieldin complex subunit 3"
                     /protein_id="NP_001386739.1"
                     /db_xref="GeneID:120101079"
                     /db_xref="RGD:41350418"
                     /translation="MDYCRMTTEVILHYRPYENDPKQLAKIAENVIQDFPTHPLSRFI
                     PWFPHDESKLPLKPKRLPPVISEEAAENVKRYLTISEPNGESHSYDCTVDLLEFQPNS
                     KMQHLLQAHTLKEQTNAANLDKNSGKETQHKKRSWSVSLTSKHCPKKIFPLSRKLQAT
                     LKTLHLHTLHRARWTLEYSVCNNQTLEDIWTKLNHFIRHSELPSCNATIQRELGQIWV
                     FCDIKYCEYVGGLLKERLSLIGKIDLFVHKYGVIFSM"
ORIGIN      
        1 accccccctg ggcaatgtaa gcttttggga agccgcgtat tgtcagcccg aagtggatcg
       61 ttgaagtcag cctgtgtgga aaatatgtgt atttctgaac gaaggaatgg ccttggtaaa
      121 aagatttcac tggagccgta aaggacttaa tgaaaagaga atttaagttc tcaggagcag
      181 aaagaagtcg agcgtgcgtt tgaaggccga tcttccggga cttgtgcctg gcacttttcc
      241 ttccagaccc agtgaaactt cagcctgtat aggctgaggt cagaagtgcc ggtcaaaatg
      301 gaagtgaatc cccccaaaca ggagcacctg ctggcgctaa aaggtcctgt ttcttctgat
      361 ttgacaagaa agacaatttt gtaataataa attacattct agctctgaag aattcagcta
      421 agaaattttc tctccattaa gagttaatgg attactgcag gatgactact gaagtaatat
      481 tacattatcg accatatgaa aacgatccca aacagctggc aaaaattgca gaaaatgtaa
      541 ttcaagactt tcctactcac ccactatcaa gatttattcc ttggtttcca cacgatgagt
      601 ccaagcttcc actcaagcct aaaagattac cgccagtaat ttctgaagag gctgctgaga
      661 atgtgaaacg gtacttaacc atttcagaac ctaatggtga atcacacagc tatgactgca
      721 cagtagatct tttggagttt caacctaatt ccaaaatgca gcacttactc caggcacaca
      781 cactaaagga gcagactaac gcagcaaatt tggataaaaa ttcaggaaaa gaaacacagc
      841 acaagaaaag atcctggagt gtttcactta ctagcaaaca ttgtccaaaa aagatttttc
      901 ctttgtctag aaaattgcaa gccactttaa agacactaca tttgcacacc cttcatagag
      961 caagatggac tttagaatac agtgtttgca acaaccagac tctggaagac atttggacaa
     1021 aactcaacca ctttatcagg cacagtgaac ttccttcttg taatgctacc atccagagag
     1081 agttaggcca aatatgggtg ttctgtgata ttaagtactg tgaatatgta ggaggtctgc
     1141 ttaaagaaag attatctctt attgggaaaa ttgatttatt tgtacataaa tatggtgtta
     1201 tttttagtat gtaacaaatt ttgatcatca tgaagaatat tctgaatgaa atgaatttgg
     1261 actgaaattg tgaaatgaat agactttatt aaccattgta ttttaatgac ttttaaatgt
     1321 tggtgcttct ttatagtgtg aagaaaataa ttctgtaata tgtgtacagt ttgtgtccag
     1381 tatataaata tcatgtagcc ccaaggcttg tcgatcaagt caggaatatt ccagattatg
     1441 tttattagca ttctcttgag tgaactttga tgaattattg tttgtgctaa aattgaaagt
     1501 gttttaactt ttatcccaat gatttgagtt taaatgaatg gttttatttt aatgactcct
     1561 taaagtccct tattcaccta aatataatat gagctgtgtg taaaattaaa agtcttatca
     1621 cagtttg
//
