LOCUS       XM_574844                970 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus shisa like 2B (Shisal2b), mRNA.
ACCESSION   XM_574844
VERSION     XM_574844.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_574844.9.
            
            On Jan 21, 2021 this sequence version replaced XM_574844.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..970
                     /gene="Shisal2b"
                     /note="shisa like 2B; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, 1 Protein, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:499520"
                     /db_xref="RGD:1564672"
     CDS             107..886
                     /gene="Shisal2b"
                     /codon_start=1
                     /product="protein shisa-like-2B"
                     /protein_id="XP_574844.3"
                     /db_xref="GeneID:499520"
                     /db_xref="RGD:1564672"
                     /translation="MKVEGSPQRAKKTVGALEREKRQRAGPPEKGTTQRRDPAVRAER
                     SSAAWTAGSRAQRAQRLSAKHSDPRSQRCSESPGLGTSTVLAHNARTSGSCARPAAMS
                     ESSRLCSGYYSLNRSFVEPFQCPRRGDGAALLYCCGFADLKYCCSEPGSYFPYKHSYM
                     WSLSIGALIGLGIAALVLLAFVISVCVLCYLFLYTKPQRLDNGLKLQHLEASSTLEGN
                     VNRKAKGLISNAASNSTNETYEADDVTQERTMDTTQINIAC"
ORIGIN      
        1 tggctgtacc tgtgtaaact gcatccgtgc ccacctctgc tgctctctat agagatcctt
       61 ctgatgcgga gtgaaggcta actactacag gttgtggatg aagtgaatga aagtggaagg
      121 gagtccgcag agagcaaaga aaacagtcgg agctctggag agggagaaga ggcagagggc
      181 tgggccacca gagaaaggga ccactcagag acgagaccca gcggtgagag cagagcgctc
      241 cagcgccgcg tggacagcgg gaagtagagc ccagagggct cagaggctga gtgccaagca
      301 ctcagacccc agatcgcaaa ggtgctcaga gtcgccgggg cttgggacga gcacagtcct
      361 agcgcacaac gcacgcacct cggggtcctg cgcacggccc gcagcgatga gcgagagcag
      421 ccgcctgtgc tcaggctact acagcctcaa ccgcagcttc gtggagccct tccagtgccc
      481 gcggcgcggc gatggggccg cgctgctcta ctgctgcggc ttcgcagacc tcaagtactg
      541 ctgcagcgag ccgggcagct acttccccta caagcacagc tacatgtgga gcctcagcat
      601 tggtgctctg attggattgg gaattgctgc ccttgtctta cttgcctttg tcatcagtgt
      661 ctgtgtcctt tgctacttat ttctgtacac aaaacctcaa agattagaca atggccttaa
      721 acttcagcac ctagaggcat cttctaccct agaaggcaat gtaaatagaa aagccaaagg
      781 cctcatttca aatgcagcat caaattcgac aaatgagacc tacgaagccg acgatgtgac
      841 tcaagaaaga acaatggaca caacacaaat caatattgcc tgttagctaa atccctgttt
      901 tgaaagctta cccaagagag ggagcattaa gaataaagaa tgcaaaaaat taaataaaat
      961 taaagatgca
//
