LOCUS       NM_001108223            1459 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus src homology 2 domain-containing transforming
            protein D (Shd), mRNA.
ACCESSION   NM_001108223 XM_001059653 XM_237255
VERSION     NM_001108223.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474092.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_237255.3, XM_001059653.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158646.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..1459
                     /gene="Shd"
                     /note="src homology 2 domain-containing transforming
                     protein D"
                     /db_xref="GeneID:316507"
                     /db_xref="RGD:1590885"
     exon            1..214
                     /gene="Shd"
                     /inference="alignment:Splign:2.1.0"
     exon            215..555
                     /gene="Shd"
                     /inference="alignment:Splign:2.1.0"
     CDS             277..1308
                     /gene="Shd"
                     /codon_start=1
                     /product="SH2 domain-containing adapter protein D"
                     /protein_id="NP_001101693.1"
                     /db_xref="GeneID:316507"
                     /db_xref="RGD:1590885"
                     /translation="MAKWLRDYLNLGSRRPPPQPPTPDYTESDILRAYREQKDLDFED
                     PYEDSNGRPESEITESSDPKYNSPRHRLIKVEAVNLARAKTLLGSLGEEPEADTEYSD
                     PFDAQPQPPAPNNGYMEPYDARNISSEQPSRAVQLYDTPYEEQDMKPEDGGSSGQSRR
                     PLEDERPADEYDQPWEWKKDHISRAFAVQFHGPDWERTPCSTKEPWRPQPAERVDTAL
                     ALEKQPWFHGPLSRVEAENLLSLCKEGSYLVRLSETRAQDCILSLRSNQGSMHLKFAK
                     TRENQVVLGQHSGPFPSVPELVLHYSARPLPVQGIEHLALLYPVTSSQSSQGPCTLAA
                     RPEKGQGDP"
     exon            556..661
                     /gene="Shd"
                     /inference="alignment:Splign:2.1.0"
     exon            662..838
                     /gene="Shd"
                     /inference="alignment:Splign:2.1.0"
     exon            839..947
                     /gene="Shd"
                     /inference="alignment:Splign:2.1.0"
     exon            948..1067
                     /gene="Shd"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1459
                     /gene="Shd"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcaagggacg cagcggtgac ggtggacgcc tcccgccctg cgccacctcc tgccaggacc
       61 ctgcgcaatg ctcgggcctc tcgcccaatc cctgcccggc cttggtccca agggtgactc
      121 ggtccccgct ccggtggcct tttcctctgg gaccctccag ggtctgggtc ctgctgtctc
      181 catcccagag ccacagaagg tctgaggtct gcaggtcgag ctgcagagct cgacatggag
      241 gcccttgttt gacaccagca tattttggag acaccaatgg ccaagtggct ccgggactat
      301 ctgaacttgg gcagccggag gccccctccg caaccgccca cccccgacta tactgagagc
      361 gacatcctgc gggcctaccg tgaacagaag gaccttgact tcgaggaccc ctatgaggat
      421 tccaatggcc gtcccgagtc agagatcacc gagtccagcg accccaagta caactctccc
      481 aggcaccggc tgatcaaggt ggaggctgtg aacttggcca gagctaagac cctgctgggc
      541 agcctggggg aagagccgga agcagacact gagtactcag accctttcga tgcccagcct
      601 cagccaccag cccccaacaa tgggtacatg gagccctatg acgcccggaa catctccagc
      661 gaacagccga gtagagctgt ccagctttac gataccccat atgaggagca ggatatgaaa
      721 ccagaagatg gaggctcttc aggccagagc cggaggcccc tggaggatga gaggccagca
      781 gatgaatatg accagccctg ggagtggaag aaagatcaca tttccagggc tttcgcagtg
      841 caatttcatg gtcctgactg ggaacggact ccatgctcca ccaaggagcc ttggagacca
      901 cagcctgcgg agcgtgtgga tacagctctg gccctggaga agcagccgtg gtttcatggt
      961 cccctgagcc gagtggaggc cgagaacctt ctgtccctct gcaaggaagg cagctacctt
     1021 gtgcggctaa gcgagaccag ggctcaggac tgcattctgt ccctcagaag taaccagggt
     1081 tccatgcacc tgaaattcgc gaagacccgg gagaaccagg tggtactagg acagcacagt
     1141 gggcccttcc ccagcgtgcc tgagctggtc ctgcattaca gtgcccgccc actgcctgtg
     1201 caaggcattg agcacctggc tctgctctac cctgtcacca gcagccagag ctctcaagga
     1261 ccctgcacat tggctgctag gccagagaag ggacaggggg acccatgaca tacagaaagg
     1321 ccctgctgcc agacctgctg ggttcaactg tggaatccac atggtggcag ctgaaagctg
     1381 caagttgacc tctgatttac aaacaagtca caggccataa attaataaat aaatgtaata
     1441 aaaattaata ctaaaacct
//
