LOCUS       NM_001105961            2072 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus SHC binding and spindle associated 1 like
            (Shcbp1l), mRNA.
ACCESSION   NM_001105961 XM_001071379 XM_222735
VERSION     NM_001105961.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Liu,M., Shi,X., Bi,Y., Qi,L., Guo,X., Wang,L., Zhou,Z. and Sha,J.
  TITLE     SHCBP1L, a conserved protein in mammals, is predominantly expressed
            in male germ cells and maintains spindle stability during meiosis
            in testis
  JOURNAL   Mol Hum Reprod 20 (6), 463-475 (2014)
   PUBMED   24557841
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC160910.1.
            
            On Mar 16, 2008 this sequence version replaced NM_001105961.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC160910.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q21"
     gene            1..2072
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /note="SHC binding and spindle associated 1 like"
                     /db_xref="GeneID:289101"
                     /db_xref="RGD:1305609"
     exon            1..376
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..1933
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /note="SHC SH2 domain-binding protein 1-like protein; SHC
                     SH2-domain binding protein 1-like"
                     /codon_start=1
                     /product="testicular spindle-associated protein SHCBP1L"
                     /protein_id="NP_001099431.1"
                     /db_xref="GeneID:289101"
                     /db_xref="RGD:1305609"
                     /translation="MESDPTTSEPEAAIGSDSSPVEQAILVSLRDSASAKGLMSPVRS
                     VVASPRPVKGKAARRRLQLPPVSQAETGDEEPVPAVPENQEEAQPLPPICASPMRGMW
                     RSEKVALYCDQVLQGSKAEDADEAMSKYLSEKLKVTDRWLGVWKSNPELFFEKYEEAS
                     IPFVGILVEVTCKPRQNLSSCFKVTVSVAEPFSSNIANIPRDLVDEVLGELEYSAPLL
                     EVYPVEGQDADVRDIALALEVVRFFYDFLWRDWDDEENCENYTALIEERINLWCDIQD
                     GTIPGPIAQRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEAVECWKKYYEIVMLCGLL
                     KMWEDLRLRVHGPFFPRILRRRKGKRDFGKTITHIVAKVMTTDMVKNLSSDTLLQQHD
                     DLNLALDSCYSGDIVVIFPGEYQASNLALLTDDITIKGVGKREEIMITSEPSHDSFVV
                     SKADSVKLMQLSLIQQGTVDGIVVVESGHLTLENCLLKCEGTGVCVLTGASLTITNSE
                     ITGAQGAGVELYPGSIAILEGNEIHHCNNLRTSDSSKSTLGGVNMKVLPAPKLKMTNN
                     HIYNNNGYGVSILQPSEQFFIVAEAALNKGAASGDKKDDKMLSKVMQTLNVEMNNNRI
                     EANSKGDIRIVTG"
     exon            377..526
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            527..741
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            742..828
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            829..1047
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            1048..1153
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            1154..1307
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            1308..1558
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            1559..1681
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
     exon            1682..2045
                     /gene="Shcbp1l"
                     /gene_synonym="RGD1305609"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caacggctgc agcgcggaca tggagtcgga tcccacgacc tccgagcccg aggccgcgat
       61 cgggagtgac agctcgccag tggagcaggc gatcctagtc tccctccggg actccgcgtc
      121 cgccaagggc ctcatgtccc ccgtgcgctc ggtggtggcc tccccgcgcc cagtgaaggg
      181 caaggctgca cggcgaaggc tccagctccc gccggtctct caagccgaga caggtgacga
      241 ggagcccgtg cccgcggtgc ctgagaacca ggaggaggcg cagcccctgc cgccgatctg
      301 cgcatccccc atgaggggca tgtggcgcag cgagaaggtg gctctgtact gcgaccaggt
      361 gctacagggc tcgaaggcag aagatgcaga cgaagctatg agcaaatacc tgtcagagaa
      421 gctgaaagtg acggacagat ggctgggagt ctggaagagt aacccggagc tcttctttga
      481 gaaatatgaa gaggcttcca tcccctttgt tggtatcctg gtggaggtga catgtaaacc
      541 acgccagaac ttgtcatctt gtttcaaagt gacagtttct gtggctgagc ccttttcttc
      601 taacattgca aacatcccga gggacttggt ggatgaggtt ctgggggaac tggagtacag
      661 tgcacctctc ttggaagtgt atcctgtgga agggcaagat gcagatgtcc gagacattgc
      721 tctggccttg gaagttgtaa ggttttttta tgattttctt tggagagact gggatgatga
      781 agaaaattgt gagaattata ctgcccttat tgaagagaga attaatctgt ggtgcgacat
      841 acaggacggg acaatccctg gccccattgc acagcgcttc aagaaaacgc ttgagaaata
      901 caaaaacaag cgagttgagc tcatcgagta ccagagcaac attaaagaag acccgtctgc
      961 ggctgaggcc gtcgagtgct ggaagaaata ctatgagata gtgatgctct gcgggttgtt
     1021 gaagatgtgg gaagacttac ggctgagagt tcatggacct ttctttccga ggattctgag
     1081 acgtagaaaa gggaagagag actttgggaa gactataacc cacattgtag ccaaggtgat
     1141 gactactgac atggtaaaga acttgtcttc ggacacgctt ctgcagcagc acgacgacct
     1201 gaacctggct ttggacagtt gctacagtgg ggatatagtt gtcattttcc ccggggagta
     1261 ccaagcctcc aatctggctt tgctgactga tgacatcact ataaagggag ttggaaagag
     1321 agaagaaatt atgattactt ctgaaccttc gcatgacagc tttgtggtat ccaaagctga
     1381 cagtgtgaaa ctaatgcagc tttctttgat acaacaaggg acagtcgatg gcattgtggt
     1441 ggtcgagtct ggtcacctga ctctagaaaa ctgcttgcta aagtgtgaag ggacaggagt
     1501 gtgcgttctc acaggggctt ccctgacgat cacaaacagc gagataactg gtgcccaggg
     1561 cgctggtgtt gaactatacc ctgggagcat agccattttg gaagggaatg agattcatca
     1621 ctgtaataat ctcagaacca gcgacagttc aaaaagcacc ttgggtggtg ttaacatgaa
     1681 ggttcttcca gcacccaaac tgaagatgac gaacaatcat atctacaaca acaatggcta
     1741 tggagtgagc attcttcagc catcagaaca gttctttatt gtagcagaag cagctctcaa
     1801 caaaggggct gcgtcaggag ataagaaaga tgacaaaatg ctctccaaag tcatgcaaac
     1861 tctgaatgtg gaaatgaaca acaacaggat agaagcaaac tcaaaggggg atattaggat
     1921 agtcactggg taaagcatct ggataggtgt tcagatttta tagttcagga atgtgataaa
     1981 tgattcttgt acctcataga aattgtagtt ttaaattcaa agattaaaat gtttaaatgc
     2041 tttcaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//
