LOCUS       NM_001011929            1795 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus SH3 domain -containing GRB2-like endophilin B1
            (Sh3glb1), mRNA.
ACCESSION   NM_001011929 XM_214739
VERSION     NM_001011929.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Yun,Q., Jiang,M., Wang,J., Cao,X., Liu,X., Li,S. and Li,B.
  TITLE     Overexpression Bax interacting factor-1 protects cortical neurons
            against cerebral ischemia-reperfusion injury through regulation of
            ERK1/2 pathway
  JOURNAL   J Neurol Sci 357 (1-2), 183-191 (2015)
   PUBMED   26253702
  REMARK    GeneRIF: Bif-1 was implicated as a novel target of cerebral
            ischemia reperfusion injury and played a neuroprotective role by
            promoting cell survival.
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1795)
  AUTHORS   da Silva,A.F., Mariotti,F.R., Maximo,V. and Campello,S.
  TITLE     Mitochondria dynamism: of shape, transport and cell migration
  JOURNAL   Cell Mol Life Sci 71 (12), 2313-2324 (2014)
   PUBMED   24442478
  REMARK    Review article
REFERENCE   4  (bases 1 to 1795)
  AUTHORS   Wang,D.B., Uo,T., Kinoshita,C., Sopher,B.L., Lee,R.J., Murphy,S.P.,
            Kinoshita,Y., Garden,G.A., Wang,H.G. and Morrison,R.S.
  TITLE     Bax interacting factor-1 promotes survival and mitochondrial
            elongation in neurons
  JOURNAL   J Neurosci 34 (7), 2674-2683 (2014)
   PUBMED   24523556
REFERENCE   5  (bases 1 to 1795)
  AUTHORS   Hasson,S.A., Kane,L.A., Yamano,K., Huang,C.H., Sliter,D.A.,
            Buehler,E., Wang,C., Heman-Ackah,S.M., Hessa,T., Guha,R.,
            Martin,S.E. and Youle,R.J.
  TITLE     High-content genome-wide RNAi screens identify regulators of parkin
            upstream of mitophagy
  JOURNAL   Nature 504 (7479), 291-295 (2013)
   PUBMED   24270810
REFERENCE   6  (bases 1 to 1795)
  AUTHORS   Vinatier,J., Herzog,E., Plamont,M.A., Wojcik,S.M., Schmidt,A.,
            Brose,N., Daviet,L., El Mestikawy,S. and Giros,B.
  TITLE     Interaction between the vesicular glutamate transporter type 1 and
            endophilin A1, a protein essential for endocytosis
  JOURNAL   J Neurochem 97 (4), 1111-1125 (2006)
   PUBMED   16606361
  REMARK    GeneRIF: Overall, the discovery of endophilin as a partner for
            VGLUT1 in nerve terminals strongly suggests the existence of
            functional differences between VGLUT1 and -2 terminals in their
            abilities to replenish vesicle pools.
REFERENCE   7  (bases 1 to 1795)
  AUTHORS   Takahashi,Y., Karbowski,M., Yamaguchi,H., Kazi,A., Wu,J.,
            Sebti,S.M., Youle,R.J. and Wang,H.G.
  TITLE     Loss of Bif-1 suppresses Bax/Bak conformational change and
            mitochondrial apoptosis
  JOURNAL   Mol Cell Biol 25 (21), 9369-9382 (2005)
   PUBMED   16227588
REFERENCE   8  (bases 1 to 1795)
  AUTHORS   Modregger,J., Schmidt,A.A., Ritter,B., Huttner,W.B. and Plomann,M.
  TITLE     Characterization of Endophilin B1b, a brain-specific
            membrane-associated lysophosphatidic acid acyl transferase with
            properties distinct from endophilin A1
  JOURNAL   J Biol Chem 278 (6), 4160-4167 (2003)
   PUBMED   12456676
REFERENCE   9  (bases 1 to 1795)
  AUTHORS   Wang,M.Q., Kim,W., Gao,G., Torrey,T.A., Morse,H.C. 3rd, De
            Camilli,P. and Goff,S.P.
  TITLE     Endophilins interact with Moloney murine leukemia virus Gag and
            modulate virion production
  JOURNAL   J Biol 3 (1), 4 (2003)
   PUBMED   14659004
REFERENCE   10 (bases 1 to 1795)
  AUTHORS   Pierrat,B., Simonen,M., Cueto,M., Mestan,J., Ferrigno,P. and
            Heim,J.
  TITLE     SH3GLB, a new endophilin-related protein family featuring an SH3
            domain
  JOURNAL   Genomics 71 (2), 222-234 (2001)
   PUBMED   11161816
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079085.1.
            
            On Feb 11, 2005 this sequence version replaced XM_214739.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079085.1, SRR8487227.60899.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q44"
     gene            1..1795
                     /gene="Sh3glb1"
                     /note="SH3 domain -containing GRB2-like endophilin B1"
                     /db_xref="GeneID:292156"
                     /db_xref="RGD:1304859"
     exon            1..385
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     CDS             314..1411
                     /gene="Sh3glb1"
                     /note="SH3 domain-containing GRB2-like protein B1;
                     SH3-domain GRB2-like B1 (endophilin); SH3-domain GRB2-like
                     endophilin B1"
                     /codon_start=1
                     /product="endophilin-B1"
                     /protein_id="NP_001011929.1"
                     /db_xref="GeneID:292156"
                     /db_xref="RGD:1304859"
                     /translation="MNIMDFNVKKLAADAGTFLSRAVQFTEEKLGQAEKTELDAHLEN
                     LLSKAECTKVWTEKIMKQTEVLLQPNPNARIEEFVYEKLDRKAPSRINNPELLGQYMI
                     DAGTEFGPGTAYGNALIKCGETQKRIGTADRELIQTSALNFLTPLRNFIEGDYKTIAK
                     ERKLLQNKRLDLDAAKTRLKKAKAAETKSSSEQELRITQSEFDRQAEITRLLLEGISS
                     THAHHLRCLNDFVEAQMTYYAQCYQYMLDLQKQLGSFPSNYVSNNNQTSGTPVPYTLS
                     NTIGPSAVASTGSLVITCPPNLSDLKDSSSTRKARVLYDYDAANSTELSLLADEVITV
                     FSVVGMDSDWLMGERGNQKGKVPITYLELLN"
     exon            386..527
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     exon            528..656
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     exon            657..790
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     exon            791..883
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     exon            884..973
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     exon            974..1074
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1075..1303
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1304..1769
                     /gene="Sh3glb1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgcggtcgc gctgtcgcgg ggcggcgggg tgggttcctt cggatgcgac ctccgtcccg
       61 gtggctcgca gctgctctgc gacgcgacag gcccggcgcg tgagcggcga ggcgcgcgcc
      121 ggcgccggcc gccttccctc cccctcgcca cctcctccgc ctccccctca ggaaacgaca
      181 gctgcgcggg gctggcgccg cctcccgcca cctaccacgt ccgcccggcc gtcgcccggc
      241 gccccagccc ggccgcggcg ctccccgcct ctccgctagc ccagccggcg gctctgcccg
      301 gttgccgccc agcatgaaca tcatggattt caacgtgaag aagctggcgg ccgacgcggg
      361 cactttcctc agccgggccg tgcagttcac agaggaaaag cttggccaag cagagaagac
      421 agaactggat gctcacctgg aaaatctcct cagcaaggcg gagtgcacca aagtgtggac
      481 agagaagata atgaagcaga ctgaggtgct gttgcagcca aatccaaatg ccaggataga
      541 agaatttgtt tatgagaaac tggacagaaa agcgccaagt cgtataaaca acccagaact
      601 tttgggacag tatatgattg atgcaggcac tgagtttggc ccagggacag cttatggtaa
      661 tgcccttatt aaatgtggag aaacacagaa gcgaattgga acagctgaca gagagctgat
      721 tcaaacatca gccttaaatt tcctcactcc tttaagaaac tttatagaag gggattacaa
      781 gacaatcgca aaagaaagga agctattaca gaataagaga ctggatttgg atgctgcaaa
      841 aacaagacta aaaaaggcaa aagctgcaga aactaaaagt tcatctgaac aggaattaag
      901 aataactcaa agtgaatttg atcgtcaggc agagattacc cgtcttctgc tggaaggaat
      961 cagcagtaca cacgcccatc atctccgctg tctgaatgac tttgtagaag cccagatgac
     1021 ttactatgca caatgttacc agtacatgtt agacctacaa aaacaactgg gaagttttcc
     1081 atccaattat gtttctaaca acaatcagac ttctgggaca cctgtgccgt atactttgtc
     1141 aaataccatt ggtccttctg ctgtggcttc aacaggtagc ctggtaatca cctgtcctcc
     1201 taacctcagt gaccttaaag actccagcag caccaggaag gccagggtgc tgtacgatta
     1261 tgacgctgcc aacagtacgg agctgtcact cctggcagac gaggtaatca ctgtgttcag
     1321 tgtcgttgga atggactccg actggctaat gggggagaga ggaaatcaga agggcaaggt
     1381 gccaattacc tacttagagc ttctcaatta attcagggag accatgagag gttgcccatc
     1441 atgacaccat atttatataa ataactctaa agcaggttta aatactttca atgttaaagt
     1501 cacaagagac tgaaaaagaa aaattacaag ccatcagaaa ctggctgttt gccaataaac
     1561 ctgcatggtt aatccttcat tacagaattt atgttagcga tttcatgaca agaatgtttt
     1621 cttaaacaat tctctttcta ctgaggtttc actaacaaac aagttctact tttgagtccc
     1681 aacttaaaaa caaaaggatt cttttctact gaatttttca ttaacggcga gctttttctt
     1741 ttatgcaaaa taaatttatt gtgcatgata aaaaaaaaaa aaaaaaaaaa aaaaa
//
