LOCUS       NM_001127581            2968 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus SH3 binding domain protein 5 like (Sh3bp5l),
            mRNA.
ACCESSION   NM_001127581 XM_001074803 XM_001075049
VERSION     NM_001127581.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Jenkins ML, Margaria JP, Stariha JTB, Hoffmann RM, McPhail JA,
            Hamelin DJ, Boulanger MJ, Hirsch E and Burke JE.
  TITLE     Structural determinants of Rab11 activation by the guanine
            nucleotide exchange factor SH3BP5
  JOURNAL   Nat Commun 9 (1), 3772 (2018)
   PUBMED   30217979
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC166447.1.
            
            On or before May 24, 2008 this sequence version replaced
            XM_001075049.1, XM_001074803.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166447.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..2968
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /note="SH3 binding domain protein 5 like"
                     /db_xref="GeneID:690898"
                     /db_xref="RGD:1590939"
     exon            1..15
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /inference="alignment:Splign:2.1.0"
     exon            16..625
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /inference="alignment:Splign:2.1.0"
     CDS             443..1621
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /codon_start=1
                     /product="SH3 domain-binding protein 5-like"
                     /protein_id="NP_001121053.1"
                     /db_xref="GeneID:690898"
                     /db_xref="RGD:1590939"
                     /translation="MADLKKSPGGRETPQGELRPEVVEDEVPRSPVEEEPGGGGSNSS
                     ETKLSPREEEELDPRIQEELEHLNQASEEINQVELQLDEARTTYRRILQESARKLNTQ
                     GSHLGSCIEKARPYYEARRLAKEAQQETQKAALRYERAVSMHNAAREMVFVAEQGVMA
                     DKNRLDPTWQEMLNHATCKVNEAEEERLRGEREHQRVTRLCQQAEARVQALQKTLRRA
                     IGKSRPYFELKAQFSQILEEHKAKVTELEQQVAQAKTRYSVALRNLEQISEQIHARRR
                     GLPPHPLGPRRSSPVGAEAGPEGIEDGDSGIEGAEGGGLEEGSSLGPGPGPDTDTLSL
                     LSLRTVASDLQKCDSVEHLRGLSDHASLDGQELGAQSRGRRGSDGGVRGGRHQRSVSL
                     "
     exon            626..688
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /inference="alignment:Splign:2.1.0"
     exon            689..817
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /inference="alignment:Splign:2.1.0"
     exon            818..979
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /inference="alignment:Splign:2.1.0"
     exon            980..1153
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /inference="alignment:Splign:2.1.0"
     exon            1154..2944
                     /gene="Sh3bp5l"
                     /gene_synonym="RGD1307036"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcccggtata gcaagctccc cagaggcgca tctcctgccc tctgcttgga cttagccttc
       61 tctccatctg ccaccacagc ctggaggcgc ttgcctccac cctcccgaat ggtgctcctc
      121 ttcacaggtg tcggcccagg atccaggccc cctttgctcc ctgagttgga gctgttgctg
      181 ttggggtctc ttggtggact ccccgtggtg gggtgtgaag aacttttgca cagacgaggc
      241 tttagttata gggacctcat cagcagtttg aatctcagcc tctaactgaa tgccaggctc
      301 ctctgtgctc cttcttttca acctttgaga ctagaagacc cttctctatt acatccaaag
      361 cccaggaagc ctcaagctgg ggccctggtc ccagcatgtc agccctctct tgtgcatagg
      421 gctctgccct cttccagcca acatggctga cctcaaaaag tctccagggg gccgggagac
      481 accacagggg gaacttcggc cagaagtggt agaggacgaa gtccctagga gccctgtcga
      541 agaggagcct ggaggaggtg gaagcaacag cagtgagacc aaattgtccc ctagagagga
      601 ggaagagctg gatcctagga tacaggagga gctggagcat ctgaaccagg ctagtgagga
      661 aatcaaccag gtggagctac agctagatga ggccaggact acctatcgga ggatcctgca
      721 ggagtcagca aggaagctta acacacaggg ctctcacttg gggagctgta ttgagaaggc
      781 ccggccctac tatgaggctc ggcgactggc taaggaggcc cagcaggaga cccagaaggc
      841 agcactgcgg tatgagcggg ctgtgagcat gcacaatgcc gcccgggaga tggtctttgt
      901 ggctgagcag ggtgtcatgg ctgacaaaaa tcgactggac cctacctggc aggagatgct
      961 caaccatgct acctgtaagg tgaacgaggc agaggaggag cgtcttcgag gtgaacggga
     1021 gcatcagcgt gtgacgaggc tgtgccagca ggctgaagcc agggtccagg ccctgcagaa
     1081 gaccctccgg cgggccattg gcaagagccg cccctatttt gagctcaagg cccagttcag
     1141 ccaaatcctg gaggagcaca aggccaaggt gacagaactg gagcagcagg tggcacaggc
     1201 caagacccga tactcagtgg ctctgcgtaa tctggagcag atcagcgagc agattcatgc
     1261 caggcgccgg ggcttgcccc ctcaccccct gggccctcgg cgatcctccc ctgttggggc
     1321 tgaagctgga cctgagggca ttgaggatgg ggacagtggg attgaagggg cagagggtgg
     1381 aggcctggag gaaggcagca gccttgggcc tggcccaggc ccagatacgg acacgctgag
     1441 cctattaagt cttcgtactg tagcctctga cctgcagaag tgtgactcag tggagcactt
     1501 gcgtggcctc tcggaccatg ccagtctaga tggccaagaa ctgggagccc agagccgggg
     1561 acgccgggga agtgacggcg gagtccgagg aggccggcac cagcgcagtg tcagtctgta
     1621 gctctggcca gaactaactt ggtttctccc atgggcaatc agggcccccc aggccttctc
     1681 tcaagtccgg tctgctccag attctggtct gcagccttcc tcgggaagat cagctgtctc
     1741 agtcctgtgt ccctagcttc ctcactgttc cttctctcag gagacagctc tctctttgcc
     1801 ttacccacct agaaggcttg ctctctggcc ctgtctcctc ttcccctgct ggcactcaag
     1861 tctctctgat gctctcttga tttcctcttc tgacctgact tctatctgtc gggcttttcc
     1921 cctcagggaa cttggtctag aagacacagg aggtcatgtg agaatatgaa catcctagcc
     1981 cagtgattgg acaggccctt acccgttgat tcctggccct gtcttcccag agggcatgcc
     2041 ctagatacgc tgctgagtcc ctggcagcct gtgctcttct cctgtcccag cttgcctgtg
     2101 agcagtgtgt gaaatgtcca tgtgcctctg gaagacaaca ccttctgtca gtgcacctct
     2161 cgtgacctta gctgctgtgc tgtgtgtcct tcagtcagtg tcagatgcgg gagtcaaacc
     2221 ctgttaccga cacaggcatt tgggccaact ccaaatggcc actgtttgtg tggtgtgtct
     2281 ccagttgggc tgagccctta caattgccaa ggtgctagtg ggtccctcat gggatctatg
     2341 ctggagggta gagatgtgag attctcaagg ctgagacctt gccatcccca ccttccccat
     2401 gtgtggcgct aggcttgctt tttcttggta cagactgaac tggagcttgg caccctcctt
     2461 cagggtggca ttagggaact tggtgctcaa ttgctctctg tcgctcttcc tcataccaga
     2521 cggtacctat gccaggaacc tttggagagc gcttaagcat ggttacaaag cctcctctgt
     2581 tgtgtgagag gagttgacct gaagcgaggg gtcccagcct caaagagcag ctctgggtat
     2641 tggtgttccc gggttgtgtg aagggaaacc acaccagatc tgggtgcctt ggaagagctg
     2701 agctcctgtc ccaccaggag gatgaggaga atgcttgccc agggttgggg gaagagtgcc
     2761 agtgtctcgc atgggatctc ccaattttca ggtttcaagg atggtcacaa tgaaaacctg
     2821 tggggtttga ggtggctgtt caggaggaac agaaacggag gacatgattg tgcgagtgca
     2881 tgtgctggtg cgtgtgggag agggtcagtc ctggttttat ttaaataaaa tagtttatgt
     2941 aacaaaaaaa aaaaaaaaaa aaaaaaaa
//
