LOCUS       NM_001389250            4565 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus SH3 domain binding glutamate-rich protein like 2
            (Sh3bgrl2), transcript variant 1, mRNA.
ACCESSION   NM_001389250
VERSION     NM_001389250.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4565)
  AUTHORS   Prunotto,M., Farina,A., Lane,L., Pernin,A., Schifferli,J.,
            Hochstrasser,D.F., Lescuyer,P. and Moll,S.
  TITLE     Proteomic analysis of podocyte exosome-enriched fraction from
            normal human urine
  JOURNAL   J Proteomics 82, 193-229 (2013)
   PUBMED   23376485
REFERENCE   2  (bases 1 to 4565)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.2334745.1,
                                           SRR26360190.1756903.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-193               JAXUCZ010000008.1  93341149-93341341
            194-379             JAXUCZ010000008.1  93370709-93370894
            380-460             JAXUCZ010000008.1  93386488-93386568
            461-4565            JAXUCZ010000008.1  93390710-93394814
FEATURES             Location/Qualifiers
     source          1..4565
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q31"
     gene            1..4565
                     /gene="Sh3bgrl2"
                     /note="SH3 domain binding glutamate-rich protein like 2"
                     /db_xref="GeneID:501026"
                     /db_xref="RGD:1591931"
     exon            1..193
                     /gene="Sh3bgrl2"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..472
                     /gene="Sh3bgrl2"
                     /note="isoform 1 is encoded by transcript variant 1; SH3
                     domain-binding glutamic acid-rich-like protein 2; SH3
                     domain binding glutamic acid-rich protein like 2; SH3
                     domain-binding glutamic acid-rich-like protein 2-like"
                     /codon_start=1
                     /product="SH3 domain-binding glutamic acid-rich-like
                     protein 2 isoform 1"
                     /protein_id="NP_001376179.1"
                     /db_xref="GeneID:501026"
                     /db_xref="RGD:1591931"
                     /translation="MVVRVFVASCSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEE
                     QRQWMYKNIPPEKKPAQGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRPA
                     STAEP"
     exon            194..379
                     /gene="Sh3bgrl2"
                     /inference="alignment:Splign:2.1.0"
     exon            380..460
                     /gene="Sh3bgrl2"
                     /inference="alignment:Splign:2.1.0"
     exon            461..4565
                     /gene="Sh3bgrl2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggaggcgct gggctttcat ccgcggagcg gcgggagcca gacgtgtctc tgcggtcttt
       61 cccgacggtc gctcgggagt cggcagcagc ctcagtcgcg ttcagcttct gtgtccgtgt
      121 caacaacgat ccctgacgca gcgagaggat ggtggtccgc gtgttcgtcg cctcatgctc
      181 aggcttcgtg gcgatcaaga agaagcagca ggatgtggtt agatttctgg aagccaacaa
      241 gatagagttc gaggaggtgg acatcaccat gtcggaggaa cagaggcagt ggatgtacaa
      301 aaacattccc cctgagaaga agcctgcgca gggcaaccct ctgcctcctc agatattcaa
      361 tggggatcga tactgtggag actatgacag tttttttgaa tcgaaggaaa gcaacacagt
      421 cttttcattc ttaggcctaa agccacggcc agcgtccacg gctgaacctt agaggtagag
      481 tggaaggtga tggacttgca ttttggagca tcccctggta ctcagcactc acctgcttac
      541 ctgatgcatc actgtgacaa agccacacac acaatctgta acttcgcttg acccggagaa
      601 ggtgtttttg gaggatgtgg gaataatggg gactgcgtga ttgctctgag ccaatcagga
      661 ctgtggtggt ggttctctta tttttctgat ttgtctgcag ttgctccact cacctgaaag
      721 tactctcctc tgtgacaggt cggcttcctt aatgactgac agataattgg gtagcaccat
      781 cagggaaaaa acactggacc taccctaggg tttattagaa accggtcttg cagaaaccca
      841 ttcctctcta agctgcctgc ctgccatcct tgaaaccatt ttgccaggat ggtaacatca
      901 ttgaatccaa aagaagaaag cagtgctggc tgacaaagga ctctgagggt tcttgtggta
      961 gcgtcacaaa tgtcactact ctgctactta acgcctgctg gaaaagctag atgctctcaa
     1021 ctccgttctg tagtggagac cctcacttct gtatattctc caggtgcttc caaaaccacc
     1081 attgcaagat ctaatgatca cagccaagtt acaaggcaga aaagaattgc tgctttggaa
     1141 aatgtctcct tctttatatc ttgcaagggg gaagtttcac tgtatgcata agcctccttg
     1201 agaggtctat tttgagaggt gcaccgctca tatagtaagt taatagagtt tgctctgtca
     1261 gtgtgcagaa gcgttttcag ctcttgtagt ttgcttgcac acacatgcac atatattttt
     1321 aaatgcagct ccccaaagta acagctgctg gttctatttt gtgaagggat tatatttttg
     1381 gagaaaggaa atgcttggtt agatatattt tgtgagccat tgacgccagt cctgccgggg
     1441 ctggggctca gcggtagaac aatgcatagc acacacagat tctgcactca gctccagtac
     1501 agtggaaagg aaagagacac caggctggct gcctcgtgtg acttcccatg ttacctacct
     1561 tagtctctac cctcctagtt ctatttcagt ccagctcaca gacttgggct tttcagaata
     1621 acacagatag gcactcttgc actcttgagc acaagtgaga cttcaagcag cacagacagg
     1681 aagggctgtc tagagcatgg tcctgaatgt ctttgggagg caaagtccct gctccccctg
     1741 ggtgaacact gacgtgtgat tttcactcgc cgggatcatg gcatatttag agttagtttc
     1801 gcacataggg atggccttga acaggaaaga ggctgattga aatctcggcc tagtcctagc
     1861 agggtggtgc tggcctctcg ctctgattct gagaaggaaa tgtttgcgaa attgaaaggt
     1921 caaacaagcg gccccctttg ccagcccacc tcaagctttg ctgaacgtgc tctgctccgc
     1981 atgctgaagc tgagatcctg ttgcatcaag aagagaggag gacagcttcc tttatgaatg
     2041 accaaatgac cggtgcacaa ttttctgtcc aaggaaagct tgtcaagttg tgggtattag
     2101 tggctgaccg gtattaaaca agatccagga aaaattccat ttggtaaatc ccggggaggt
     2161 tccagggttt tgtttttgtg ttttgttttt cctcctctaa ctggatattg tgcttgaatt
     2221 tgtgagtctt ctgaggaatg tttttaaatt gtcttgtgaa atcaacccag gttatatcga
     2281 tctacttact tacatcgagt ctactcttgc cagtgagtgc caataacagt ttggcaaagt
     2341 gaaatcttag catgtttcag ttgtaggagc agtaacctta cagtgttgag gaaatggaga
     2401 aagctactaa gatttgtcat gtaacttttt aattgtccat accatagcta ctatgactgt
     2461 gttaagcgca ctgaatagat ggtgttctta gaatggctgt cacagctact atcatttcca
     2521 ccaccattct tctggggagc actggggact cagcaagaga aatgagatta gaggtagtga
     2581 cttgttttag tgtccagaag cccagtatgg agtcaccaca gttcccagac aacagtgtgt
     2641 gcagagcgtg ctgggtctta tatgatttcc agtctgccgg tctgactgac ttctcccctc
     2701 cccttcttcc tttccctctc tctgttggtt gttgtttgag acagtcttgc tacgtagacc
     2761 tggaacccac ttctgcttct gcctcccaag cgctagaatc acatgctgct gaaatagcgc
     2821 tcttctgatt ccctttagtt agcttgcctt tagattgagt cgccaccgtc ttcaaagcct
     2881 agcaaagaag tgcagacatg actggaaggc cagtagcttt caaggcgtag tgttgacttc
     2941 ctgtaggctt gtgggacaaa ggaagtgtgc tgctcatgac cagacagtgc catttgaaca
     3001 tcaggtgagt gggaaacgcc atactgctag gtatctgcag accagaagac aatttaagtt
     3061 caggaaattc tttgccaaat tctgggggtt tattaaaatc aaagaggaga aaaaggaagt
     3121 tttgcccttg gatgctaata ttctttaggc tctccttttc tgctttatga agttaaccca
     3181 atatttcatt ttcatattgt gtgaatttaa tcatctaaat atgtttctct tttgttattg
     3241 aaaggtacca aaggcttctt atgttttgtt tggctcattt gattttattg tggttttttt
     3301 ttttttctag aaataccttt tatatagaca tgtccccaag tgtctgggtc cacttcagtc
     3361 tgtgtcattg ttttttttac ctcagttcgt ttgtgtttgt ctctcaaggg agaataaatt
     3421 ccagaaaaca tgcattttaa aactggagtt gtttcttccc attccctctc cttttccaac
     3481 ttttattcct gagttacctt agatccttcc tgttgtgtta ggaacctgag cttttgctcc
     3541 catccgtgaa agggttagac tgttacaggc cagagctcct gcagcgactc acttgagaag
     3601 aatgcttgtg gttttgcctg ggcacactgg gaagagaaca gagccctctc tggccgccca
     3661 ggactaaggt ggggctcctc agccgctggc ctaggtgtat cctgtgttct tccaggcaca
     3721 ctgaagccac tagccgtttg ttccttactg gttgcagaaa acactggggt ggccataatt
     3781 tcgctcgcat gaccttcctt tggagccaca tttggaagca gaagacttcc ctggaagcca
     3841 tgtttctgaa ggtggggtcc aacgccgaag tcaccaagaa gcagttgcag aacttaaacc
     3901 ccaggacaga tggggtgtgg gggaggggtc aaaggcaaca agctgtaagc ggacagaaat
     3961 atgtctgctc atgaaaccaa atcagcagat agccctgcct gtttgtgacc tagattccaa
     4021 agggagtgct tcttagttct agacacacag gccagattag caaggctgtc tttcctgcca
     4081 gcatgaatta agccctctca gtgtgataag tcctgtctaa gcagtacagg aggatgaggc
     4141 gagcagatgg gaacatccgg tacagccgtg gtcagtggcg ggccaggtaa gttgtcagca
     4201 ctggtacggc ccatccccag aaaggttaat ggtttcttct tactaaacca tcctgacttt
     4261 ttagatctta tacatgctat ggactaatat acatacatac atacatacac acacatacat
     4321 aggtactgaa gatacatgca tacatatcta ctgaagtata gagtgataat aataaccccc
     4381 atctgcctcc tgcctccctc actgccattc tcccaaggca ccccctgcgc cccatcctca
     4441 cctctgtctc cctgttgaat atagaaagcc tcaccctgta tttgtgtgga ttgaagtctt
     4501 cctgcccttt tcattttgtc cccatgtatg tattcttaaa gaaaaataaa cagaattaaa
     4561 ccaga
//
