LOCUS       XM_008766362            2813 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SH2 domain containing 7 (Sh2d7),
            transcript variant X1, mRNA.
ACCESSION   XM_008766362
VERSION     XM_008766362.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008766362.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008766362.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2813
                     /gene="Sh2d7"
                     /note="SH2 domain containing 7; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 11 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:300718"
                     /db_xref="RGD:1309791"
     CDS             31..1410
                     /gene="Sh2d7"
                     /codon_start=1
                     /product="SH2 domain-containing protein 7 isoform X1"
                     /protein_id="XP_008764584.1"
                     /db_xref="GeneID:300718"
                     /db_xref="RGD:1309791"
                     /translation="MEGGPEQFHQGKALEEAGNGQALAEIQELALKWFMETQAPSILQ
                     NGALPPWFHGFITRKQTEQLLRDKALGSFLIRLSDRAAGYILSYRGSDRCRHFVINQL
                     RNRRYLVSGDTLSHSTLDELLRHYQEVQLEPFGETLAAACPRLEENDLYDAINTGLQQ
                     TNLGLEIPAMELPSMLPDKVTSPCLPAKPQVSFLHTKKALDASSRTGSNEESTEVPTR
                     VPPIPQKSPSLLDDSSAGPSGIVYSELKKMNRAQLGPGTEVWGRHRPAPAGNLASSPG
                     REPSRKLSDEDQNKPNSPEPAPSGEKPDQGSTMPYTSLGFPLPPNSEAQGSRATTWRQ
                     GFLKLSHEAQSSSEASSADTYQLAETSGLRQEGRDKPDQRGSTYEQIPSCWHSAAKLP
                     CPGVSPTYSQLSGPMDYGYEKIPGTPQLPEPGNTYEQIPAAKNKDTGRVHKPDKFRRL
                     FFTDKKHKS"
ORIGIN      
        1 agggcttact tatcaccagt gctcaccggg atggagggcg gcccggagca gttccatcag
       61 ggcaaggcac tagaagaggc aggaaatggg caggccttgg cagaaatcca ggagctggct
      121 ctgaagtggt tcatggaaac acaggccccc tctatcctac agaatggagc tctgcccccc
      181 tggttccatg gattcatcac tcgcaagcag acagagcagc tactcaggga caaagctctt
      241 ggttccttcc tcattcgcct cagtgaccgg gctgccggct acatcttatc ttacaggggt
      301 agtgatcgct gccgccattt tgtcatcaac cagctgcgaa atcgacgtta ccttgtctca
      361 ggagacaccc tcagccacag caccctggat gagctcctac gccattacca ggaggtgcag
      421 cttgagcctt ttggagagac ccttgctgct gcttgcccac ggctcgagga aaatgatcta
      481 tacgacgcca tcaacacggg cctccagcag actaatctag gcctggaaat tccagctatg
      541 gaacttccca gcatgctccc tgacaaggtt accagcccct gccttcctgc aaagccccag
      601 gtctccttcc tgcacaccaa gaaagcccta gatgcgagtt ccagaactgg ctcgaatgag
      661 gagagtacag aggtacccac tagagtgccc cccattcccc agaagagtcc ctctcttctg
      721 gatgactctt ctgcaggccc cagtggtatc gtctactcag aactgaagaa gatgaaccgg
      781 gcacagctag gcccaggtac agaggtctgg ggcaggcaca ggccagctcc tgctggcaac
      841 ttggcttcat ccccaggcag ggagccctca aggaaactct cagatgaaga tcaaaacaag
      901 cccaatagcc cagaacctgc cccctctggg gagaagccag accaaggctc cacaatgcct
      961 tatacttcct taggatttcc cctgcctccc aattctgagg cccaaggatc tcgggctact
     1021 acttggaggc aaggctttct aaagctgagc cacgaggcac agtcctcctc tgaagccagc
     1081 tctgcagaca cctaccagct tgctgagaca tcaggcctac gacaagaggg tagggacaaa
     1141 ccagaccaaa gaggcagtac ttacgagcag attccgtcct gctggcatag cgccgccaag
     1201 ctcccatgcc ctggagttag tccgacatac agccaactat cggggccaat ggactatggc
     1261 tatgagaaga ttccggggac cccgcagctt ccagagccag ggaacaccta tgagcaaatc
     1321 ccagctgcca agaacaagga cactggacga gtgcacaagc ctgacaagtt ccggaggctc
     1381 ttcttcacag acaagaagca taaatcctga ggaaaggcct ggcattcaga gggtttagtg
     1441 gtagccacac tgcaccaggg attactggat accctcagct catcggctac ggaactaggc
     1501 tccaagatgc agcccgggta cctatccagg aaggcctggg agagaccttg cagcagcctg
     1561 caactcctgg atgtctcttc aatgctgtcc atccacataa tgaagggata aggccagtaa
     1621 gggtggggac taactaaagg aagggttgga tgaacatggg aaggcctgga ctgatcgatc
     1681 aagctggctt catgctccag acgcttaaca agtatgtagc aggcccctgt ccaagacaga
     1741 cactttcctg acgggctaaa tgacatcatg ctattacttc tgagaacgaa agcagttccc
     1801 ttcctcacag ccttgccaga ggagatggcc gggagccaca tcctctgcac ccatcccaga
     1861 aggattcgat ccagaagctt gggatgcagc agcccaggtc caacctcaga agccatggtt
     1921 ctaacccaat atcaggctgg gctcctggga accgacccca gcccttcctt ccccactcca
     1981 ccatctttat cctagattca ctgtgcaaac tcctagcttt tgctacagaa acctgttcaa
     2041 agacatagct agtgagggtc tgaacagaga ccccctcaat aaggcaagct taaccttgga
     2101 tgtactgcta ggtagcatct ggtagccagt taggggacat ctgatgctat gctgatgtga
     2161 gcaggtcacc ccttcctgcc ctctgtctcc ggccggtcct gacctttgga gcaactcaga
     2221 ttcctcccat gcaacctacc atgaacctgg tggcttcacc tccagggact tctgggagta
     2281 gggctctgct cagtcaccag gtcgggacta gaaaattctt gctcaagctg ttcccttggc
     2341 caagctggct cttccgggaa ttgtcctgtt ttatactgct ccccttcacc catgtgtccc
     2401 caaacccata gcgtcagcaa ctgctctgtt gccttctctt ttttttttgg ttcttttttt
     2461 cggagctggg gaccgaaccc agggccttgc gcttgctagg caagcgctct accactgagc
     2521 taaatcccca gcccctgttg ccttctcttt accttgtctt tacaagctgg aggcaggaac
     2581 caaaaccaca gtcccctccc cacctgcctc cacccaggcc ctgggcagaa ctggctcagt
     2641 gcgcaccggg gaaagccact ccttggtaga ttatttggtc agtgtgcttg tccctctgaa
     2701 ctctagaagt ccctatctcc taggggtgct ggtgaaaggt ttaagaatag caggaaaacc
     2761 ccaagcctaa caatggtgag ctccctgctg gtagacaaat ccattactag gga
//
