LOCUS       XM_006252195            1242 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serpin family E member 3 (Serpine3),
            mRNA.
ACCESSION   XM_006252195
VERSION     XM_006252195.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006252195.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1242
                     /gene="Serpine3"
                     /note="serpin family E member 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 32% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:691375"
                     /db_xref="RGD:1585042"
     CDS             1..1242
                     /gene="Serpine3"
                     /codon_start=1
                     /product="serpin E3"
                     /protein_id="XP_006252257.2"
                     /db_xref="GeneID:691375"
                     /db_xref="RGD:1585042"
                     /translation="MLPLLQVTLFLLSSCFSAGGGSPLSEGLWLLKTEFALHLYQSAA
                     AETNGTNFVISPASVSLSLEILQFAARGNTGWQLAEALGYTVQDPRVREFLHTVYITL
                     HNSSQGIGMELACTLFMQTGTSLSPCFVEQVSRWANSSLELADFSEPNTTTMEASKGT
                     TRPSTGEGPGSPLWGRAGALSTQLSIVSTMTFQSSWQQRFSSVALQPLPFTCAHGLVL
                     QVPAMHQVAEVSYGQFQDAAGHKVDVLELLYLGRVASLLLVLPQDKGTPLDHIEPHLT
                     ARVIHLWTTRLKRARMDVFLPRFRIQNQFDLKSILRSWGITDLFDPLKANLKGISGRD
                     GFYVSEVTHKAKMELSEEGTKSCAATAVLLLRRSRTPAFKADRPFIFLLREHNTVAVR
                     ITHGKVANFLNFQLGQEDGHG"
ORIGIN      
        1 atgctgcctc tcctgcaggt caccctcttc cttctctcct cctgcttttc agcaggagga
       61 ggcagccccc tcagtgaagg cctgtggctg ctgaagactg agtttgccct ccacctctac
      121 cagagtgcag cagcagagac aaatgggaca aactttgtca tctcaccagc cagtgtatcc
      181 ctctccctgg agatcctgca gtttgcagcc aggggcaaca ctggctggca gctggcagag
      241 gccctaggat atactgtgca agacccaaga gtgagagaat tcctgcacac tgtttatatc
      301 acattgcaca actccagtca aggcatcggg atggagctgg cctgcaccct gttcatgcaa
      361 accggaacat ctctgtctcc ctgctttgtg gagcaggtct cccggtgggc caacagcagt
      421 ctggagctag ctgacttcag tgagcctaac accactacca tggaggcctc caaaggcaca
      481 actagaccga gcacaggtga aggcccaggt agcccactgt gggggcgggc tggtgccctg
      541 tctactcaac tctccatcgt gagcaccatg accttccaga gtagctggca gcagaggttc
      601 tcctcggtgg ccttacagcc cctgcctttc acctgtgccc atggccttgt acttcaagtc
      661 ccagcgatgc accaagtggc agaggtcagc tatggccagt tccaggatgc tgcaggccat
      721 aaggtagatg ttttggagct gctctacctc ggaagggtgg ccagtttgct cttggtgctt
      781 ccccaagaca agggcactcc tctggaccac attgaaccac acctcacagc cagagtcatc
      841 cacctctgga ccacaagact aaagagagcc aggatggatg tgtttctccc taggtttagg
      901 atccaaaatc agtttgactt aaaaagtatt ttaagatctt ggggtatcac tgatcttttt
      961 gacccactca aagctaactt gaaaggaatt tcaggccgag atggctttta tgtttctgaa
     1021 gtaacccaca aggccaagat ggagctttca gaggagggca ccaagtcatg tgcagccaca
     1081 gctgtgctgc tgctgaggcg gtctcggact cctgccttta aagcagatcg gcccttcatt
     1141 tttcttctga gagaacataa cacagtggct gttcgcatta cccacggtaa agtggctaat
     1201 tttctgaact ttcagctggg gcaagaagat ggccatggtt aa
//
