LOCUS       XM_006249640            1486 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serpin family B member 3A (Serpinb3a),
            transcript variant X1, mRNA.
ACCESSION   XM_006249640
VERSION     XM_006249640.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006249640.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006249640.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1486
                     /gene="Serpinb3a"
                     /note="serpin family B member 3A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins, and 70% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:498209"
                     /db_xref="RGD:1562868"
     CDS             150..1313
                     /gene="Serpinb3a"
                     /codon_start=1
                     /product="serpin B4-like isoform X1"
                     /protein_id="XP_006249702.1"
                     /db_xref="GeneID:498209"
                     /db_xref="RGD:1562868"
                     /translation="MHLFAKATTQFTLELYRQLRDSEDNIFYSPLSIMTALAMLQLGA
                     KGNTEKQIEKVIQFHETTKKTTEKSADCHDEESVHEQFQKLMTQLNKSNDAYDLNSAN
                     SIYGAKHFPFLQTFLEDIKEYYQANVESLDFAHAAEESEKKINSWVENQTNGKIKDLF
                     PKGSLNSSTILVLVNAVYFKGQWNHKFDEKHTEEDKFWLNKNTSKPVQMMRQKNEFNF
                     IFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEQLTADKLLEWTRAENMNMID
                     LYLSLPRFKVEEKYDLPGPLQHMGMVDAFDSKKADFSGMSSTQGLMVSKVLHKSFVEV
                     NEEGTEAAAATGVEVSLTSAQITEDFNCDHPFLFLIKHNATNSILFFGRMSSP"
ORIGIN      
        1 taaatttgtt tcccagaatc tgatgataga ggtctgtcat tttccttatg aactgatcat
       61 tactgagtga tgctttattt agtgaagtca tcctaacctt tgtgctggat ttatgctgtt
      121 ctaggacttt aaggtcacac aaagccatca tgcatttgtt tgctaaagcg actactcaat
      181 tcacacttga gctgtacagg cagctcagag actcagagga caacatcttc tattcccctc
      241 tcagcataat gacagcatta gcaatgctcc agctcggagc caagggaaac actgaaaaac
      301 aaattgagaa ggttattcaa ttccatgaaa ccacaaagaa gacaacagaa aagtctgcag
      361 actgtcatga tgaagaaagt gtgcatgaac aatttcaaaa gttaatgact cagttaaaca
      421 aatccaatga tgcttatgac ctgaattctg ccaacagtat ctatggagca aagcatttcc
      481 catttctcca gacatttttg gaagacatta aggaatatta ccaagctaat gtggaatccc
      541 ttgactttgc acatgccgca gaagaaagtg aaaagaagat taattcctgg gtggaaaacc
      601 aaacaaacgg aaaaatcaaa gacttgtttc ctaagggaag cctgaacagt agcactatcc
      661 tggttctggt gaatgcagtg tatttcaaag gacaatggaa tcacaagttc gatgaaaagc
      721 ataccgaaga agacaagttt tggctgaaca agaatacaag taaacctgtc cagatgatga
      781 ggcaaaaaaa cgagtttaac ttcatctttc tggaggatgt gcaggccaag atggtggaaa
      841 taccatacaa aggcaaggag ctaagtatgt tcatcctgct gccaatggaa attgatggtc
      901 tgaagaagct tgaagaacag ctcactgctg acaagttact agagtggaca agagcagaga
      961 acatgaacat gatcgacttg tatttgtctt tgccacggtt caaagtggaa gagaagtatg
     1021 acctcccagg tccgttgcag cacatgggga tggtggacgc ctttgactca aagaaggctg
     1081 acttctcagg catgagcagc actcaaggtc taatggtgtc taaagtttta cacaagtcct
     1141 ttgtggaggt aaatgaagag gggacagaag ctgctgctgc cacgggggta gaagtcagtt
     1201 taacatcagc acagataacc gaagacttca attgtgatca ccctttctta ttcctcatca
     1261 agcacaatgc taccaacagc atcctcttct ttggcagaat gtcttctcct taagtgtggt
     1321 ggctgtgcct tgtgtccaga aaatataaca aagttgctgc agctacttta gcctggaaac
     1381 aagtttctat cgcttcattt tcttttctat ctcagagtcc ctactaagaa tgcattagtg
     1441 agggaaggat agctctatta tctctatccc ttcttgcttt ccttct
//
