LOCUS       XM_006240519            3262 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine (or cysteine) peptidase
            inhibitor, clade A, member 3A (Serpina3a), mRNA.
ACCESSION   XM_006240519
VERSION     XM_006240519.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006240519.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006240519.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3262
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3262
                     /gene="Serpina3a"
                     /note="serine (or cysteine) peptidase inhibitor, clade A,
                     member 3A; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 60 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 15 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100909605"
                     /db_xref="RGD:6502633"
     CDS             164..1396
                     /gene="Serpina3a"
                     /codon_start=1
                     /product="serine protease inhibitor A3F-like"
                     /protein_id="XP_006240581.2"
                     /db_xref="GeneID:100909605"
                     /db_xref="RGD:6502633"
                     /translation="MAGISPADLGCPDGKLGRDTAVQKGQDNKIQVDSSTLSSCNTDF
                     AFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFNLTETPEAE
                     IHQGYEHLLQRLNLPGDQVQISTGSALFIKKHLQILAEFQEKARALYQAEAFSTDFQQ
                     PHEAKKLINDYVRKQTQGKIKELISVLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSE
                     FYLDEKKSVKVPMMKIEKLTTPYFRDEELSCSVLELKYTGNASALFILPDQGRMQQVE
                     ASLQPETLRRWKDTLRPRRIDELRMPKFSISTDMRLGDILPELGIREVFSQQADLSRI
                     TGAKDLSVSQVVHKAVLDVTETGTEAAAATGVKIIPMCAKFYYVTMYFNRPFLMIISD
                     TNTHIALFMAKVTNPKED"
ORIGIN      
        1 tggaccagca tttcctaaga aggggaggag gctttggtgg ggataaatag acatcagcat
       61 gcactgggga gaacaacaga ccaagaagca gccatcctga acacctggag tcggctatca
      121 cagaagctgg cagctgcctt cagctctgca ggagaaaaag gtaatggctg gaatctcccc
      181 tgctgacctt ggctgcccag atggcaagtt gggaagggac actgcagtcc agaaaggcca
      241 agacaacaag atacaagtgg acagttcaac attgtcctcc tgcaacactg actttgcctt
      301 cagcctctac aaggagctgg ttttgaagaa tccagataaa aatattgtct tctcctcttt
      361 cagcatctcc actgccttag tcctcctgtc cctaggagca aagaacaaca ccctgaagga
      421 aattctagaa ggtctcaagt tcaatctcac agagacccct gaggcagaga tccaccaggg
      481 ctatgagcac ctcctacaga ggctcaatct gccaggggac caggtacaga tcagcacagg
      541 cagtgccctg tttattaaaa aacacctgca gatcctggca gaattccagg agaaggcaag
      601 ggctctgtat caggctgagg ccttctccac tgacttccag cagcctcatg aggccaaaaa
      661 gctcatcaat gactatgtga ggaaacagac ccaggggaag atcaaggaac tgatctcagt
      721 cctagacaag aagacatcta tggtgcttgt gaattacatt tactttaaag gcaaatggaa
      781 gatgcccttt gacccccatg acacatttca gtctgagttc tacttggatg agaagaagtc
      841 tgtgaaggtg cccatgatga aaattgagaa gttgaccaca ccctacttcc gggatgagga
      901 gctctcctgc tctgtgctgg agctgaagta cacaggaaat gccagcgccc tgtttatcct
      961 ccctgaccag ggcagaatgc agcaggttga agccagcttg caaccagaga ccctgaggag
     1021 gtggaaggac actctgaggc ccaggaggat agatgagctg cgcatgccca aattctccat
     1081 ctccactgac atgaggctgg gggatatcct tccagagctg ggcattaggg aagtcttctc
     1141 ccagcaagct gatctgagta ggattacagg ggccaaggac ctgagtgtct ctcaggtagt
     1201 ccacaaggct gtgctggatg tgactgagac aggcacagaa gcagctgctg ctactggagt
     1261 caaaataatc ccaatgtgtg caaaattcta ctatgtgaca atgtatttca acaggccatt
     1321 cttaatgatt atttctgaca caaatactca tattgccctc tttatggcta aagttacaaa
     1381 tcccaaggaa gactagaact tcccatatgg gggttgagtg tggggtcttc ttcccaagag
     1441 aagggaactg agtctgtatg taggtctctg tgttcatttt gacttccatg ctctgcttgg
     1501 ctctggcatg actggacttg agagtaacac taagtatgtg gccccctcat gcagagaagc
     1561 ctgtgcctgc tcgatatcac actccctttc ctcttggctg cactagctca gtttcctgga
     1621 cctggaatct gttgtttttt ccatctccct gctctctccc ttgaatccgc ctctatccaa
     1681 atgcctggga gctggcctgt aggctccgtc tcaatttagg gtccagttat gcttgccttc
     1741 agcttctgca acattcctct gactatacaa gctaacagtc aaaaccatgt ggaccaaaca
     1801 ggaaagctgc tgccctgtga ctagttgtaa catctgggac cacttggtgc cctgttctgc
     1861 ctcacccttt cttgtcctca gggcattgct gtccactgtc ccttgcagat tctacagtct
     1921 tggcccacgt cttgcacagt tggagccctc tctcgaagct gtatggggca tgtgggtctg
     1981 actagctcct cccttcctag atctcctact cagggaaggg tggtagcctt tccctatgtt
     2041 cccggctgac caactgcaca ggacagatgt acacctgcaa cttcatcacc caaaaggaaa
     2101 gggcactagc aaaggatcaa taaacatgtg actgtgctga gtgtggcaga attcattcaa
     2161 gtcctgttgg cagagggtag cctctggtaa caacagggca gtagagattg tcactcacat
     2221 tctgtgattc ctatgatgat cctctgtggt acatgctatc attggtagca tggaagaggt
     2281 aactgtggcc cagagcttag tcatttccct atgacacaca gctagaattt atgatattcc
     2341 aagtttcctg atgctaccta cagagacaaa catctccaaa ccataagtct gatcatgaga
     2401 tgtcccagtg gtcataggcc ggtggaggaa aaaaagaaaa cttcagatac ctcacagaga
     2461 acacagaaaa agacatggaa tgaggagagg cgttctgtcc tgaggccaga ggaggaagaa
     2521 atggagatca gaagaccaga agggtgttct gtgtggagca aagggcactg gaggcatttc
     2581 taagactctg cgaggtcagt ttaggaaaag ggcatcacca tcactcacag cacaaaagaa
     2641 cctgaccctg tgataacttc ctgtgactca aagacatggg gacctttgca agagtcaatc
     2701 actgctcctg tctagaacac gtaaccatga gaggctacag tgtagagaaa tggtggtgag
     2761 aattgtcatt gaggcaagcc ttaggaaaca tcaggacaca tctggagaga agagtgggtg
     2821 attcagctca aggggtaagc cagataacta gatagaggag gagaagaggg cagagtgcat
     2881 ttgtgtgaac tgctgggtat ccgtggagaa tcctgggagc ctgcaaacat agccatagtc
     2941 tggcaggcag agggaaaggt gtctctccag gttgagaaag ctgatcctca aggctcctga
     3001 gagctcacag tgacagatgg acctgtgtca gcagagaatt gcacacacag gattatgacc
     3061 cagtaagcac tgaaggacca cacataggac catgggatga gagaagaagg gagaaatcta
     3121 ttgttagcat acaagtgcca ccacagtgac aatgtgccta actgtcagtc aagaccctga
     3181 gctggacacc acatgcactc catgagtttg acttgattca cctatatccc tgcatccatt
     3241 tgggcctcta atggggtatc ta
//
