LOCUS       NM_182951               2763 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus serine incorporator 1 (Serinc1), mRNA.
ACCESSION   NM_182951
VERSION     NM_182951.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2763)
  AUTHORS   Inuzuka,M., Hayakawa,M. and Ingi,T.
  TITLE     Serinc, an activity-regulated protein family, incorporates serine
            into membrane lipid synthesis
  JOURNAL   J Biol Chem 280 (42), 35776-35783 (2005)
   PUBMED   16120614
  REMARK    GeneRIF: Serinc proteins incorporate serine into membrane lipid
            synthesis
REFERENCE   2  (bases 1 to 2763)
  AUTHORS   Player,A., Gillespie,J., Fujii,T., Fukuoka,J., Dracheva,T.,
            Meerzaman,D., Hong,K.M., Curran,J., Attoh,G., Travis,W. and Jen,J.
  TITLE     Identification of TDE2 gene and its expression in non-small cell
            lung cancer
  JOURNAL   Int J Cancer 107 (2), 238-243 (2003)
   PUBMED   12949800
REFERENCE   3  (bases 1 to 2763)
  AUTHORS   Grossman,T.R., Luque,J.M. and Nelson,N.
  TITLE     Identification of a ubiquitous family of membrane proteins and
            their expression in mouse brain
  JOURNAL   J Exp Biol 203 (Pt 3), 447-457 (2000)
   PUBMED   10637174
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            On Feb 15, 2022 this sequence version replaced NM_182951.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088852.1, AY339894.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676787, SAMN16676810
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-121               JAXUCZ010000020.1  37415313-37415433   c
            122-283             JAXUCZ010000020.1  37412650-37412811   c
            284-453             JAXUCZ010000020.1  37409522-37409691   c
            454-533             JAXUCZ010000020.1  37408521-37408600   c
            534-671             JAXUCZ010000020.1  37408161-37408298   c
            672-841             JAXUCZ010000020.1  37407450-37407619   c
            842-932             JAXUCZ010000020.1  37406610-37406700   c
            933-1077            JAXUCZ010000020.1  37400447-37400591   c
            1078-1308           JAXUCZ010000020.1  37400122-37400352   c
            1309-2763           JAXUCZ010000020.1  37396497-37397951   c
FEATURES             Location/Qualifiers
     source          1..2763
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20q12"
     gene            1..2763
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /note="serine incorporator 1"
                     /db_xref="GeneID:294421"
                     /db_xref="RGD:727843"
     exon            1..121
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     CDS             83..1444
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /note="tumor differentially expressed protein 2; tumor
                     differentially expressed 1, like"
                     /codon_start=1
                     /product="serine incorporator 1"
                     /protein_id="NP_891996.1"
                     /db_xref="GeneID:294421"
                     /db_xref="RGD:727843"
                     /translation="MGSVLGLCSVASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYAL
                     FLLVGVCVACVMLIPGMEEQLNKIPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYL
                     LLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTFTTVWFYVGMAGA
                     FCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIILFFV
                     YYTHPASCSENKAFISVNMLLCIGASVMSILPKIQESQPRSGLLQSSVITIYTMYLTW
                     SAMTNEPETNCNPSLLSIIGFNTTRPVPKDGQSVQWWHPQGIIGLVLFLLCVFYSSIR
                     TSNNSQVNKLTLTSDESTLIEDGNGRSDGSLDDGEGVHRAVDNERDGVTYSYSFFHFM
                     LFLASLYIMMTLTNWYRYEPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNR
                     DFD"
     exon            122..283
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            284..453
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            454..533
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            534..671
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            672..841
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            842..932
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            933..1077
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            1078..1308
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
     exon            1309..2763
                     /gene="Serinc1"
                     /gene_synonym="LRRGT00191; Tde1l; Tde2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacagtaaa taagcctcga aaaagcaagg aagaagctgt ctccatcttg tcggctcgcg
       61 ctggtcgggc gacgcggcga cgatggggag cgttttgggg ctgtgctccg tggcgagctg
      121 gattccctgt ttgtgtggca gcgccccgtg tttgctgtgc cgatgctgtc ctagtgggaa
      181 caactccact gtgactagat tgatctatgc acttttcttg cttgttggag tatgcgtagc
      241 ttgtgtaatg ttaataccag gaatggaaga acaactgaat aagattcctg ggttctgtga
      301 gaatgagaaa ggtgttgttc cttgtaatat tctggttggc tacaaagctg tgtatcgcct
      361 gtgctttggc ctggccatgt tctatcttct cctctcttta ctaatgatca aagtgaaaag
      421 cagcagcgac cctagagccg cggtccacaa cggattctgg ttctttaaat ttgctacagc
      481 agttgcaatt attattggcg cattcttcat cccagaaggc acttttacaa ctgtgtggtt
      541 ttatgtgggc atggcaggcg ccttttgctt catccttata caactagtct tacttattga
      601 ctttgcccat tcttggaatg aatcctgggt tgaaaaaatg gaagaaggga actcaagatg
      661 ttggtatgca gccctgttgt cagccaccgc tctgaattac ttgctgtctc tggtcgccat
      721 catcctgttc tttgtatact atactcaccc agccagctgc tcagaaaaca aggcgttcat
      781 cagtgtcaac atgctgctct gcatcggcgc gtctgtaatg tccattctgc ccaagatcca
      841 ggaatcacaa ccaagatctg gcttgttaca gtcttcagta attacaatct acacaatgta
      901 tttgacatgg tctgctatga ctaatgaacc agaaacaaac tgcaatccaa gtctgctgag
      961 catcattggc ttcaatacca caagacctgt cccaaaggac gggcagtctg ttcagtggtg
     1021 gcatcctcaa ggaattatag gactcgttct cttcctgctc tgtgtgtttt attcgagcat
     1081 ccgtacctcc aacaacagtc aggttaataa actgactcta acaagtgatg agtcaacatt
     1141 aatagaggac gggaatggca gaagtgacgg gtcactagac gatggtgaag gcgtccaccg
     1201 agctgtagat aacgaaaggg atggagtcac ttacagttac tccttctttc acttcatgct
     1261 cttcctggct tcgctttaca ttatgatgac ccttaccaac tggtacaggt atgagccttc
     1321 tcgtgagatg aagagtcaat ggacagcagt ctgggtgaaa atctcttcca gttggattgg
     1381 cattgtgctg tatgtttgga cactggtggc accacttgtt cttaccaatc gggattttga
     1441 ctgaatgggg cgtctggcat gagtcccact ttggtcattg tttatttgac agtaacagta
     1501 ttcgcaattt ttgtacagtt gtatgtgctg ttgtgtaaca gttttttctc ttgcatgaaa
     1561 tagatttact ctgccatttt atccatgttc ttgctaagtg tactggtgat ataaattgca
     1621 aagggagaat tttgaatgtg gtggcaaatt agcaaagatg gacgttgata ggcatatctc
     1681 atctgctctg tacatatgga attaaaattg tgttagaact tatgctactt tagaaacatt
     1741 aagtgtatgg ctgccttttg aaatactgga cgtgttgttg ccttacagag gactacaaat
     1801 acaaagcaaa tggctgtttt aaaattatgt aaataagtca caagctagtt gtctgaaaac
     1861 tcttaagtcc ctttaatttt gatagaattt ttttcttact aggaggtcca ggatgttttg
     1921 tttcgtggaa agcagtatag gaagtggagg taagctgagc agtaggcaag agccttcaca
     1981 gaaagtcact ggtaatgagt tttaaagcaa gtactgtaga ttatgatttt ctctctaaga
     2041 aagtatggcc tttacaaaaa atgaatggtt tgctctttgt gaacacacaa ttatggattt
     2101 catagagata ttaacagctc ttcatgtaga cacaattttg aaaaggatat tatgttagaa
     2161 aaatttcaaa ctacgtctcc caaacaaaat gggaaacctt agaggacata aaatattagg
     2221 ctcgggttag gtacttttaa gataaagtct agtccagttt aaatgtcaac tagtgcaaaa
     2281 gctagtgaca aagctggata ccaaaaatag ccaacactac aacataaaca ctttgtattc
     2341 aaagtataca attcacttta taaattatta atggtatata atttgtataa aatatattgc
     2401 tgctgtccag catgcttttt tttaaaatcc aaacacaagg ccaggaggat agttaatttg
     2461 aagaatagat aacttccatt acactacaca tttaacaatg cttaaatgtt tgtttactgc
     2521 catgcaattg atattataat tctattgaaa atcagtatgc ctcaatttag atagaaatgc
     2581 ttatttatgt tagtatctag tttaaaagct tttaaagatc tacaagcttc tttaaaaata
     2641 tttattgtgc aaatggaata gagcaattca tcttaatttt ccaaccttat cccgtgttaa
     2701 tactttgttt cacaagtttg aatggctgtg ttctatctct taaataaacg aattcaaaga
     2761 aaa
//
