LOCUS       XM_017602159            2810 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus septin 6 (Septin6), transcript variant
            X3, mRNA.
ACCESSION   XM_017602159
VERSION     XM_017602159.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017602159.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017602159.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2810
                     /gene="Septin6"
                     /gene_synonym="Sept6"
                     /note="septin 6; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 16 ESTs, 43 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:691335"
                     /db_xref="RGD:1585082"
     CDS             359..1816
                     /gene="Septin6"
                     /gene_synonym="Sept6"
                     /codon_start=1
                     /product="septin-6 isoform X3"
                     /protein_id="XP_017457648.1"
                     /db_xref="GeneID:691335"
                     /db_xref="RGD:1585082"
                     /translation="MGNGERKKGKEGKGKPCIDALLKRIHLHDFCPNNFLDRSPLNET
                     RWRQRRIQAPKRAVGHSPRGLWGEDCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNIL
                     CVGETGLGKSTLMDTLFNTKFEGEPTTHTQPGVQLRSSTYDLQESNVGLKLTIVSTVG
                     FGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHSYHDSRIHACLYFIAPTGHSL
                     KSLDLVTMKKLDSKVNIIPIIAKSDAISKSELAKFKIKITSELVSNGVQIYQFPTDDE
                     SVAEINGTMNAHLPFAVVGSTEEVKIGNKMMRARQYPWGTVQVENEAHCDFVKLREML
                     IRINMEDLREQTHARHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQ
                     KKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQEEKKKLEDKKKCLDEEMN
                     AFKQRKAAAELLQSQGSQAGGSQTLKRDKEKKNFF"
ORIGIN      
        1 gccgagactc cggttgcaga gagaactgga actgggctcg ccctagggga aggcagcgcg
       61 gccaatccgt cccctcccca cacctacttt gagggggtgg gtgatagagg agaggttggg
      121 gttggagcag cggtgagggg gcccctccct ggcacctccc tccaccagac ttggtcgcgc
      181 ccgaagtgta acactttctc tttgtcggag gagctcttct gtttcctgtg cagcagctcc
      241 cgttgtggag gcacccgtag cagccctggc ggaccaagga gcgatggcag cggccgatat
      301 agctcgccag gtggtgcatt gaaactacat acaagacacg tggaaagaag aaaaggggat
      361 ggggaacgga gagaggaaga aggggaagga aggaaaaggg aaaccatgca tagatgctct
      421 cttgaaacgc atccatctgc atgacttttg ccccaacaac ttcctggaca gatccccgtt
      481 aaacgagacc agatggaggc agaggcgaat tcaggctccc aagagggcag ttgggcattc
      541 acccagaggc ctatggggcg aagactgtcg aactgtcccc ctggctggac atgtggggtt
      601 tgacagcttg cctgaccagc tggtgaataa gtcagtcagc cagggcttct gcttcaacat
      661 cctgtgcgtg ggggagacag gtttgggcaa gtccaccctc atggataccc tgttcaacac
      721 caagtttgaa ggggagccaa cgactcacac acagccaggt gttcagctcc ggtccagtac
      781 ctacgacctc caggagagca atgtggggtt gaagctcaca attgtgagca ctgtaggctt
      841 tggggaccag atcaacaagg aggacagcta caagcccatc gtggaattca ttgatgctca
      901 gttcgaggcc tacctacagg aggagctgaa gatccggaga gtactgcact cctaccatga
      961 ctcccgaatc cacgcctgct tgtatttcat tgccccgaca gggcattcgc ttaagtctct
     1021 ggacctagta accatgaaga agctggatag taaggtgaac atcattccca tcattgccaa
     1081 gtcagatgcc atttctaaga gtgagctggc aaagttcaag atcaaaatca ccagtgagct
     1141 tgtgagcaat ggagtccaga tctatcagtt ccccacagat gatgagtcgg tggccgagat
     1201 caatggaacc atgaatgccc acctgccgtt tgctgttgtt ggcagcacag aagaagtgaa
     1261 gatagggaac aagatgatgc gagctcggca gtatccttgg gggaccgtgc aggttgaaaa
     1321 tgaggcccac tgcgactttg tgaagctgcg ggagatgctg attcgaatca acatggagga
     1381 tctgcgggag cagacccatg cccggcacta cgaattgtac cgccgctgta agctggagga
     1441 gatgggcttc aaggacaccg accctgacag caaaccattc agtttacagg agacatatga
     1501 ggcgaaaaga aacgagttcc tgggggagct ccagaagaaa gaagaggaga tgagacagat
     1561 gtttgtccag agagtcaaag agaaggaagc agagctcaag gaggctgaaa aagagctgca
     1621 tgagaagttt gaccgtctga agaaactgca ccaggaggag aagaagaagc tggaagataa
     1681 gaagaagtgt ctggatgagg aaatgaatgc tttcaagcag agaaaggcgg cagccgagct
     1741 gctccagtct cagggctctc aggctggagg ctcgcagact ctgaaaagag acaaagagaa
     1801 gaagaacttt ttttaacctt gtcttcagca gctgtgctaa gtctaaagga gaagattgcc
     1861 attatagaag agttagttag ggctccatac tgtctcaagc aagaaaccaa ccagtccccc
     1921 tcccctgcaa ctgcgcacat atacaccaca ctcaacaagt gtacatgtgt ccctgtgtcc
     1981 aggcgagaag ctctcttctg acttacatgg tgtttcacat ggaattgtct tgtcctaaac
     2041 tcacaaggca ggaaaagaat catcagactg gaaatggacc aaatgtaacc tcagagagac
     2101 aacaacagga ccactcaccc aggtgttaag tgactggcag gagacctcag ctgtgagtgt
     2161 ggaagtgctg ttcacaaggt tttgagtttg atgttgtttt ctaaaaaaca attctctggt
     2221 tcaatgggtt aactgtcttc agacactatt aagctgattc tgaatctgga agagaaagtt
     2281 gagtgacatt tgcatcttaa gcattcacag actttctgca gaccccagca aaagggggga
     2341 gaaatggaac tattaccatt cagctgaaga aagacatgag gggggcttaa gcttagttga
     2401 gagcaaagtt tctccacaca aacttccaag gggctttgcg ggtttcgcaa gaggtttctg
     2461 ctcaacttgg tatgttgaag gagagctttg atggcggtaa atctgccttg aaatcaatgg
     2521 ctttccttac tctctgaata ccatgtgaat gtgctctttc ctatccgtcc ataccacaaa
     2581 caccaacatt ctgctgtctt gtctcttgag agagcctctt tgcatgtttt ccagaatctc
     2641 tgtttgtttt tcctttcttc tctgtggttc tttttgctga aatgtgtgat cagtcactgc
     2701 ccctctgggg ctttcattct ccagaagata catcccagaa ccagcactgt ttagctcatt
     2761 atctttctaa tgtccatgtc aattttcaat aaaattcaaa gaaatactca
//
