LOCUS       NM_001368669            3550 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus septin 14 (Septin14), mRNA.
ACCESSION   NM_001368669 XM_008769202
VERSION     NM_001368669.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Rozenkrantz,L., Gan-Or,Z., Gana-Weisz,M., Mirelman,A., Giladi,N.,
            Bar-Shira,A. and Orr-Urtreger,A.
  TITLE     SEPT14 Is Associated with a Reduced Risk for Parkinson's Disease
            and Expressed in Human Brain
  JOURNAL   J Mol Neurosci 59 (3), 343-350 (2016)
   PUBMED   27115672
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Feb 10, 2021 this sequence version replaced NM_001368669.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.2907120.1,
                                           SRR26360181.3025418.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-119               JAXUCZ010000012.1  32611386-32611504
            120-188             JAXUCZ010000012.1  32612174-32612242
            189-306             JAXUCZ010000012.1  32617401-32617518
            307-502             JAXUCZ010000012.1  32618258-32618453
            503-689             JAXUCZ010000012.1  32619276-32619462
            690-845             JAXUCZ010000012.1  32622349-32622504
            846-942             JAXUCZ010000012.1  32625436-32625532
            943-1111            JAXUCZ010000012.1  32626922-32627090
            1112-1244           JAXUCZ010000012.1  32629915-32630047
            1245-3550           JAXUCZ010000012.1  32632490-32634795
FEATURES             Location/Qualifiers
     source          1..3550
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q13"
     gene            1..3550
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /note="septin 14"
                     /db_xref="GeneID:689118"
                     /db_xref="RGD:1596186"
     exon            1..119
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            120..188
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     CDS             135..1424
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /codon_start=1
                     /product="septin-14"
                     /protein_id="NP_001355598.1"
                     /db_xref="GeneID:689118"
                     /db_xref="RGD:1596186"
                     /translation="MAEKPINTLVQTPGSEDPENENIRCLTTLGHFGFECLPTQLVNK
                     SIQKGFSFNILCVGETGIGKSTLINTLFNTNLKEAKSSHFYSKVGLKVKTYELLERNI
                     PLKLTVVKTVGYGDQINKEASYQPVVDYLDAQFEAYLQEELKIKRSMPDYHDSRIHVC
                     LYFITPTGHSLKSLDLITMKSIDRRVNIIPLIAKADSLSKNDLQRFKNNIMSELSSNG
                     VHIYQFLADDEATAQVNSSGLLPFAVVGSMEEVKVGKRMVKGRHYPWGVLQVENENHC
                     DFVKLRDLLLCTHMEDLKDQTHTQHYECYRSSRLQKLGFSDKGPNNKPVSFQEMYEAK
                     RQEFHDQCQREEEELKQTFMQRVKEKELTFKDAEKELQDKFEHLKRIQQEEILKLEEE
                     RRKLEEQIIDFYKMKAASESAQAQVCMNVKKDKDRKK"
     exon            189..306
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            307..502
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            503..689
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            690..845
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            846..942
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1111
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            1112..1244
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            1245..3550
                     /gene="Septin14"
                     /gene_synonym="Sept14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccaactgtt gcaaatacag tgaatattaa tttggtccaa acccacagat agcaagggag
       61 aacacaccag actccgagtc tgttcggact gcgcacttca cagctgagac ccggggcagc
      121 cttctcagtc tgacatggca gaaaaaccaa tcaacacgtt ggtgcaaacc cctggcagtg
      181 aagatccaga aaatgagaac atccgttgct taaccactct tggccatttt gggtttgaat
      241 gtttgcccac tcagctggtg aacaaatcaa tccaaaaagg attctctttt aatattctct
      301 gcgtgggaga aactggaatt ggaaaatcaa ctctgatcaa tacactgttc aatacgaatc
      361 tgaaagaggc caaatcttcc catttctact cgaaggttgg actgaaggtg aagacatatg
      421 aacttctgga aagaaacatt cccctgaagt tgactgttgt gaagacggtc gggtatggcg
      481 atcagataaa caaggaagcc agctaccagc cagtcgttga ctacctggat gctcagtttg
      541 aagcgtacct ccaggaggag ctgaagatca agcgctccat gccggactac cacgattctc
      601 gcatccacgt ctgcctttac ttcatcaccc ctacaggaca ctccctcaag tccctggact
      661 tgataacgat gaagagcatc gacagacggg tgaacatcat accgctgatt gccaaagcgg
      721 actcgctttc taagaacgac ctgcagaggt tcaagaacaa cataatgagc gagctgagca
      781 gcaatggcgt ccacatctat cagttcctgg cggatgacga agctactgct caagtaaaca
      841 gctcggggct gttacccttt gctgtggtgg ggagcatgga ggaggtcaaa gttggaaaaa
      901 gaatggtcaa gggccgccat tacccttggg gcgttttgca agtggaaaat gaaaaccact
      961 gtgactttgt gaagctccgg gatttgcttc tctgcaccca tatggaagat ctgaaagacc
     1021 aaacccacac tcaacattat gaatgttaca ggagcagcag gctgcagaag ctgggtttca
     1081 gtgacaaggg ccccaacaac aagccagtga gttttcaaga gatgtatgaa gccaagagac
     1141 aagagtttca cgatcagtgt cagagggagg aggaagaact caagcagacg ttcatgcagc
     1201 gcgtcaagga gaaggagctg acctttaagg atgcggaaaa ggagctgcag gacaagttcg
     1261 agcacctgaa gagaatccag caagaggaga tcctgaagtt ggaagaagag aggagaaaac
     1321 tggaagagca aatcatagat ttttataaga tgaaggctgc ttccgagtca gcacaggctc
     1381 aggtgtgcat gaacgtaaag aaggacaaag atcgtaagaa atagtcttct cttaccttgc
     1441 cgtctgattt cagaatgtcc cgtctgattt tagaacccat tatcctctac tcctatacct
     1501 gtgagcttgt cttcatagca cttagttttg actgaaatgc taatcttttt taaaaagtga
     1561 ctccgcacat gtcgttctcc acaagagtgt caaatacttg ggaagaagat acggtttttt
     1621 gtttgcttgc ttgtttcttt tttttttaac aaaatttcaa ttgtgggagg aagatatgtt
     1681 gttgtttttt ttttttttta aaagcaaaat ctcaaacatt cgattttacc gatgaaggct
     1741 caggagtcag atgctgggtg aaagcctgct agctcagaga ggcagagaga gaacccagct
     1801 gacctttctc cagagctgaa gtgaccctca ctgaattccc ctctcccatg ccacctcaag
     1861 taacctccaa actgaatgtt cctcccttct gcttcctgtg cagctatctc tgtcctgact
     1921 ctctatggtt ttttccctta gtaattctat gttcccgtcc taacaactgg ctgcttgctc
     1981 tatctcttga cctatggttg actttattaa atcttatcta caatattcaa gtagaaagct
     2041 cttggatcaa aggtgtgtgc taaggctgag ctgcaccaca actagaaaca ggcttttcta
     2101 taaataacaa aatctcgggg ttcgcagtgt aatcaaatat cctgcagcat ttccccattt
     2161 tttgtctaaa aaggaaaggt ttttttttta actctaacac agtttagaac tgctttaagt
     2221 tataaaaata aagctgattc tttaattaca ccattattag aagttgtggc tatagagaca
     2281 acagttttag agacatagtc taaaactgtt tataacaatg tagctatttc tgccgagctt
     2341 tctacaaagt ctagcttggt tgtattttgc attcgtatga ttaaatattt tttagttcaa
     2401 agttccttaa aatgtttctg tcagtctcat atgaactcag caatttgaat atcctagtag
     2461 tttttagtgt gaagccgatc tttgggtggt gtttgtcaga taaatggcaa tcctgatcag
     2521 gcagaacaca gcagtcaagc ccaaaggcat ccattgttcg cacatcagta gcaagaaagc
     2581 tatcctggga caaagtctct ggtgttgtgc ctttccaggc tatacccatt gtagctgagc
     2641 aagatggtgg gctgtcttca agatgctcat tcccgagtgg agtccaccac aaccctaact
     2701 ctaagagtgg gggtttcctt ttttggcagg ttatatcttt tctagggcag aatgtttttt
     2761 ggcaacagag aaagtattat gttttgattg aaattagact cttgaaaatt tgaaactaaa
     2821 tataccttag tctgagtgga taaatatacc catattcccc tttctctttg tatattgatt
     2881 tgaggcttaa gtgtatttat ttttagatca caatggacat tcactttaaa tttcagcctg
     2941 ccttttttgc aaagcatctt ttaaatcaaa atcactgtaa ttcttatggg cctgcctctc
     3001 aaatgttggg atagaagatg tgaaccacta cctggctatg ggtcccttat aatagtcctt
     3061 ttcatagggt tgtcctgctt taatttgttt ctccgtttct cggtattttt ttagtgttaa
     3121 gggtaaacgt tgacttacct tgttgattca ttctgaattt cttctctagc aaattttaac
     3181 attctagtct taattaaaca cgatgccaat ttatccacta ttttattatt ttcggatgtt
     3241 ttgtccatct tgcctgaatg gaccacacta aatttaatgc ttttgctaag ttttgatagg
     3301 ttttccactt ccattcatat ctgctagtta gtggtttatc cattttgatg tccgtatagt
     3361 taaacctttg cacacacacc atgaattgga taggattgtg tggtatacct gtaatatgct
     3421 ttatgttgta atatgcaaag aatttcattt tactagagac ctatgcctag agcattatta
     3481 atttgtacag gtatctgccg cagaccaccc aggggagtgt gtcagcagag ggaccaaggc
     3541 ttggatttca
//
