LOCUS       NM_001105888            4866 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus SUMO specific peptidase 7 (Senp7), mRNA.
ACCESSION   NM_001105888 XM_001057745 XM_221566
VERSION     NM_001105888.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4866)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Jul 1, 2021 this sequence version replaced NM_001105888.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383, SAMEA5760386
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-163               JAXUCZ010000011.1  58033604-58033766   c
            164-216             JAXUCZ010000011.1  58027068-58027120   c
            217-297             JAXUCZ010000011.1  58019566-58019646   c
            298-389             JAXUCZ010000011.1  58004758-58004849   c
            390-587             JAXUCZ010000011.1  57982136-57982333   c
            588-779             JAXUCZ010000011.1  57970212-57970403   c
            780-895             JAXUCZ010000011.1  57942556-57942671   c
            896-1077            JAXUCZ010000011.1  57938865-57939046   c
            1078-1408           JAXUCZ010000011.1  57927047-57927377   c
            1409-1566           JAXUCZ010000011.1  57925328-57925485   c
            1567-1713           JAXUCZ010000011.1  57922085-57922231   c
            1714-1747           JAXUCZ010000011.1  57917887-57917920   c
            1748-1927           JAXUCZ010000011.1  57915048-57915227   c
            1928-2190           JAXUCZ010000011.1  57914483-57914745   c
            2191-2324           JAXUCZ010000011.1  57912729-57912862   c
            2325-2441           JAXUCZ010000011.1  57910900-57911016   c
            2442-2564           JAXUCZ010000011.1  57908699-57908821   c
            2565-2657           JAXUCZ010000011.1  57902755-57902847   c
            2658-2782           JAXUCZ010000011.1  57902167-57902291   c
            2783-2835           JAXUCZ010000011.1  57901236-57901288   c
            2836-2879           JAXUCZ010000011.1  57898243-57898286   c
            2880-2948           JAXUCZ010000011.1  57897602-57897670   c
            2949-3099           JAXUCZ010000011.1  57896576-57896726   c
            3100-4866           JAXUCZ010000011.1  57892801-57894567   c
FEATURES             Location/Qualifiers
     source          1..4866
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q12"
     gene            1..4866
                     /gene="Senp7"
                     /note="SUMO specific peptidase 7"
                     /db_xref="GeneID:288167"
                     /db_xref="RGD:1305510"
     exon            1..163
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     CDS             124..3237
                     /gene="Senp7"
                     /EC_number="3.4.22.68"
                     /note="SUMO-1-specific protease 2; sentrin/SUMO-specific
                     protease SENP7; SUMO1/sentrin specific protease 7;
                     Sumo1/sentrin/SMT3 specific peptidase 7; SUMO1/sentrin
                     specific peptidase 7"
                     /codon_start=1
                     /product="sentrin-specific protease 7"
                     /protein_id="NP_001099358.1"
                     /db_xref="GeneID:288167"
                     /db_xref="RGD:1305510"
                     /translation="MDRARPGRRRASSEIVTEGKRKKSSPADLQKITKLLTVKSEDVL
                     AQSPLPKLRGSECWWTRSLRNKVICLDHKTTKAAHGCPPKALPKRHLKVMLTNVLWTD
                     LGREFRKTLPRNDAKLCDTSKVQSDSLPSTSVDSIETCQRLDPLHQSLNLSERIPRVI
                     LTDIRQTELGRKYLKIPSVTEASLSDTASPKSEELSSSADGSLESCQNVNHLKSFLSE
                     RGSKPSRTGDISAKEAANGRQEQGDDGDIAPEMVTPQSKDFNSGNKGDYHEEGTSNKN
                     TSYSHSETDHTPVSRKRKKRGRSNFHNSHNPKSSVDKSTEYIKEEENESTVSSKLEES
                     NEDSHQDPAPPEGLTPDSLETEATNVCSFVVQEPDVSAASGRACSPNKSSESSVSSEV
                     AENSSAAEKGEASTVKEAPPPGGNSEENQLLMSAEPIVVSSDEEGPVEHKNSVILKLQ
                     PSQDYEFMSENQTTSDPQLSELMLGACESVQVSSELCPYNPDMENISCINPNSEMDLK
                     LDFIFTCVYIGKIKGTSKGCITFTKKYIKIPFQVSMNEISLTVDTARLKRFGLWESKD
                     DDHSKRSHAILFLWVSSNYLQDIQTQLENPMLSQQSKANEFIFLELNSPISQREELKL
                     KDIMMEIGATNGELQLSCPLPWVQAFPLFQDLSPQEISFLHYYCASASSFPAVAGADM
                     KKKPVSQPSNADVVKPTYTFLHKQSSGCYSLSITSSPDEEWREVRNTGPVQKLIVYPP
                     PPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKC
                     LTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFP
                     WLEEAVYEDFPQTVSQEFQDQQSQHDNKTIDNDPHTTSTVFTSAEESQSTETSMSVPK
                     KMCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPK
                     QDNSSDCGVYLLQYVESFFQDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQ
                     QQKGSSS"
     exon            164..216
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            217..297
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            298..389
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            390..587
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            588..779
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            780..895
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            896..1077
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1078..1408
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1409..1566
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1567..1713
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1714..1747
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1748..1927
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1928..2190
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2191..2324
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2325..2441
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2442..2564
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2565..2657
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2658..2782
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2783..2835
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2836..2879
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2880..2948
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            2949..3099
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
     exon            3100..4866
                     /gene="Senp7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgcgcaag cgcgaatccc acttctggct ttctctcttc ccctccccct cccttcccca
       61 gcccgagggg tcctgaggtg acagcgcctg gaagtgggac tggaggagct ggcggtggag
      121 aagatggata gggccaggcc tgggcgtcgg cgagcttcgt cagagattgt tacagaggga
      181 aaaaggaaaa agtcatcacc tgctgattta cagaagataa cgaagttgtt aactgtaaag
      241 tcagaggatg ttcttgctca gtcaccactg cccaagctca gaggctcaga atgctggtgg
      301 acaagaagcc taagaaataa agtcatctgt ctagaccaca aaaccacaaa agctgcccat
      361 gggtgtcctc ctaaagcatt accaaaaagg catctcaaag ttatgttgac gaatgttcta
      421 tggacggact taggacgaga attcagaaag accctgccta gaaatgatgc taagttatgt
      481 gataccagca aggtgcaatc agactcattg ccttcgacat ctgttgacag catagagaca
      541 tgtcaaagat tagatcctct tcaccaaagc cttaatttat ctgaaaggat acccagagtt
      601 atattgacgg atattcggca gacagaatta ggaagaaaat acttaaagat tccatctgta
      661 actgaggcca gtttgagtga tacagccagc ccgaagtcag aggaactttc ttcgtcagcc
      721 gatggcagct tagagtcttg tcagaatgta aatcatctca agagcttttt atctgaaagg
      781 ggctcaaaac caagtaggac aggtgacatt tctgcaaagg aggctgcaaa tgggagacag
      841 gagcaggggg atgatggaga catcgcacct gagatggtta cccctcagtc taaagacttt
      901 aatagtggaa ataaaggtga ttatcatgaa gaggggacca gcaacaagaa cacttcatat
      961 tctcattcag aaacggacca tactccagtt tccaggaaga gaaagaaaag gggaagaagt
     1021 aattttcata attctcataa tcctaagtct tctgtggata agtcaacaga atatataaaa
     1081 gaagaagaaa atgagtctac agtctccagt aagcttgaag agtccaatga agactctcac
     1141 caggacccag caccacccga aggactcact ccggactctt tggagaccga ggccactaac
     1201 gtgtgctcat tcgtggttca ggagccagat gttagtgctg cctctggaag ggcctgctca
     1261 cccaacaaaa gctcggagag ctctgtttct agtgaagtgg cagagaattc ttcggcggct
     1321 gagaagggtg aggcatcgac tgtaaaggaa gcacctcctc caggaggaaa cagtgaagag
     1381 aaccagttgt tgatgtcagc tgagccaatt gttgtttcca gtgacgaaga aggaccggtt
     1441 gaacataaga attcagtaat tctaaaatta cagccttctc aagattatga atttatgagt
     1501 gaaaatcaga ctacttctga tccacagttg tcagaattaa tgctgggtgc atgtgaatct
     1561 gtacaggtat catctgaatt atgtccgtac aatcctgaca tggaaaacat ttcttgtatt
     1621 aaccctaata gtgaaatgga tctgaaattg gatttcatat ttacttgtgt gtatattggt
     1681 aaaataaaag gaacttcaaa aggttgtatc acgttcacaa agaagtatat taaaatccca
     1741 tttcaagtgt ctatgaatga gatttcactg actgtggaca cggcacgttt aaagaggttc
     1801 gggttatggg aaagcaagga tgatgaccac agtaagagga gccatgctat ccttttcctc
     1861 tgggtttcct caaactacct tcaagacatt cagacccagt tagaaaaccc tatgctaagc
     1921 cagcaatcaa aagccaatga attcattttc cttgagttaa atagtcccat ttcacaaaga
     1981 gaagaattga aattgaaaga tattatgatg gaaatcggtg cgacaaatgg agaattacag
     2041 ctctcctgtc cgttgccctg ggttcaggca tttcctttgt ttcaggatct ctctccacaa
     2101 gaaatctctt ttcttcacta ttactgtgct tcagcttcct ctttccctgc tgttgctgga
     2161 gcagacatga agaagaagcc agtgtctcag ccctcaaatg cagatgtcgt caagcctact
     2221 tacacctttc tacataaaca aagcagtggc tgctactcac tgtctattac ttcaagtcca
     2281 gatgaagaat ggcgagaagt caggaacact ggacccgttc agaagttgat tgtgtatcct
     2341 ccaccaccta ctaagggagg cttgggagta actaatgaag atctggaatg tttagaagaa
     2401 ggagaatttc ttaacgatgt gatcattgac ttttacctta agtatcttct tttggagaag
     2461 gcatcagatg aacttgttga gcgaagccac atttttagta gctttttcta taaatgcttg
     2521 acaagaaagg aaaataactt aacagaagat aatccagatc tttcagtggc tcagaggaga
     2581 cacagaagag tgagaacatg gactcgtcac ataaatattt ttaataaaga ctacatcttt
     2641 gtacctgtaa atgaatcgtc tcactggtat cttgcagtca tttgtttccc atggctagaa
     2701 gaagctgtgt atgaagattt tccacaaact gtgtcccaag agttccagga ccagcagtct
     2761 caacatgaca acaaaacgat agataatgat ccacacacca cttcaactgt gttcacgagt
     2821 gcagaggagt cccaaagtac cgagacgagt atgtcagtac caaagaaaat gtgtaagcgg
     2881 ccatgtattc tcatactaga ctccctgaaa gctgcttcca tacaaaacac agttcagaac
     2941 ttgcgagagt atttggaggt agagtgggaa gttaaacgaa aaacacaccg tgaattcagt
     3001 aaaacaaaca tggtcgacct atgccccaaa gtccctaagc aggacaacag cagcgactgt
     3061 ggggtgtatt tgctgcagta tgtggagagc ttcttccagg atcccattgt taactttgaa
     3121 cttccaattc acttggagaa atggtttcct cgccatgtaa taaagaccaa acgagaagat
     3181 attcgagagc tcattttgaa acttcactta cagcaacaga agggcagcag cagctagtta
     3241 atctgtgcac acatggcaca tgttccctaa gcttcctgga aagccgctta ccagcatctg
     3301 tgtcagctta cagagaagaa agtaactcac agtacatcat aattgttaca atgtatatgg
     3361 tatcttgttt gagtcgttgg gctctcacag ctgaaggtga tggaaaagca cttataaaat
     3421 agaagataaa atttcaaaaa tatgatattt ttatgactaa atatgcttgg attatgcaat
     3481 agcatatgta atgtgggaat gttttcctaa gtaataaact atgtgatctg tacttccaca
     3541 tgactgggtg ttgatgggag gtaggctctc cctggtgccg gcccagtgct tgtcaggttt
     3601 gctgacaagt cacatcatat tgtaattcta ttctttgcag ctcaagcatg cagtatgaat
     3661 actgtgtatt tttttaaaaa agaacttagt atcaaggctt cagaaaatgc cattcacggc
     3721 atctcttctg tataatgtgg aaaaaaatat cattaaaaat ttaccctttc aaagtgcagc
     3781 ttattattct caattgtaaa tgcaactact ttactctaat ttcctcctcc acctatttcg
     3841 atgtcatata tagggatctg agaaatgact tcatctgttc aataaaatgt gaaacaaatt
     3901 ttaataccaa ataagtttta acatactatg tagctaagct ttgtttattt gaggtatagc
     3961 tatataaata ttcattccta cattacccca gaatgtgtgt atacagtttc tataaaagat
     4021 aaaattggta tcctcataat tttaacaaag agaatacctt aaactcctat ttattattta
     4081 gaaccaaata tgtaatttta tagtttggtt tacccactac tcatctgcaa aggccagatt
     4141 tttcatttct tttatatttt taagttatgg tttttaaagc tgtatgatcc tccatggatc
     4201 tcacatatac agcacttaat attttattaa atgttcaggt aacaattcta ctgaatttat
     4261 gtaatgatga tggtattatc tagcaaacat tttagaatct tatactatca aatattttga
     4321 gggagacata gtcgtactgt tttctgaaat aatggatttt agaatattat tttaaacatc
     4381 tcttggattt acaattataa ctgtgtataa agcatttgaa gtgaaggtaa tttaaggtaa
     4441 aactaagaag tctgaaagtt ttatttccaa tcaagtgact tgggtctgtc agtcagcctc
     4501 cccgtcctcg gcttctgtag atcttgtctc tctttgcatt gttcgaggta cgtggctttt
     4561 ggagatctca catgaaaatg gttattaatt gtatatttca ttcccaattt gtgtgtgttg
     4621 gggagaattt tttaaaaagt ggctgtcaat tgtgttgtat atctcatttt ggaaagcaag
     4681 tgtgtaagac atctgataat ttcagaactt ttctgtttgt gtgtttttca aagataccat
     4741 gttccttcat catgttttgg agactgttta aaatttgtct tcctaaattc atgtagaaat
     4801 gatttgagga tatcaacatt ttgtattaaa catgttttca attcattgta attttttctt
     4861 aaatat
//
