LOCUS       XM_039080361            3279 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SUMO specific peptidase 1 (Senp1),
            transcript variant X14, mRNA.
ACCESSION   XM_039080361
VERSION     XM_039080361.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080361.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3279
                     /gene="Senp1"
                     /note="SUMO specific peptidase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:300193"
                     /db_xref="RGD:1310275"
     CDS             563..1744
                     /gene="Senp1"
                     /codon_start=1
                     /product="sentrin-specific protease 1 isoform X11"
                     /protein_id="XP_038936289.1"
                     /db_xref="GeneID:300193"
                     /db_xref="RGD:1310275"
                     /translation="MRNPLTATVFLPGSSPLGFCIFTTVSDVKRPEMEDTADGVKMDA
                     GEVTLVNHSSAFRAHLLPHSGFPEDQLALSDQQILPFRQGTLHRAFTGSTSSAAYNPD
                     YHSGFFVSKMRSPPLKRHNPSSDSFLGSGDIRTFGQSANGQWRNSTPASGSALQKPRN
                     SRSLYLETRKTSRCRILWNRVTDSCGLSNTFVGKSNHHCHVSAYEKSFPIKPAPSPSW
                     SGSCRRSLLSPKKTQRRHFSTAEETVQEEEKEIYRQLLQMVTGKQFSVAKPTTHFPLH
                     LSRCLSSNKNSLKDSLLRNGNSCASHVIGSDTSSSGSASILTAQEQLSHSAHSLISGT
                     PDVAFGSKDSALHHHLSAPHQPDSLPASNPQSEGSDSVILLKVKESQTPASSFFCLTL
                     V"
ORIGIN      
        1 gaaactgggg gaggggtgag gatggaggga gactgggccg ggaggctgtg tcggaccggg
       61 cccgctggcc tccgctgggc tgagcggaag agaggaccgc ggtggggacc gtgccctttc
      121 ttccgccccg cccctcggga ccacctccat tcccccctgc tgtccggtgg cggctgtctg
      181 gcccgggtct ggtagttggg cttactgagg ccgccctttc aggcctccgt ctcctgaccc
      241 gcggagaggc catctccatg cggtcacagc agggccttct ctgcgcccaa ctctactttc
      301 ccaaagagaa aaggccggtt gggattcccg gagtttcccg ccagagcagg gtcctctgga
      361 aggagagctg ttttcaacga ggaagttcag ctttcgctcc cacctgcttc acctctcttc
      421 cttgaaacct gaatgctgct tctcgactac tgtgtctcac gtaaacaatt ctccaactct
      481 tttaccctgt ggtatttccc tggggtgtga tagcgctaga gccatcacca gagagaaacg
      541 tctggaccct tctgcacagg ttatgagaaa ccccttaact gccacagttt tcttacctgg
      601 ctcatcgcct cttggatttt gtatctttac tacagtcagt gatgtgaaaa gacctgaaat
      661 ggaggacact gccgacgggg tgaagatgga cgctggggag gtgaccttag tgaaccacag
      721 ctccgccttc agagcccacc tcctgccaca ctcaggcttt ccagaggacc agcttgcact
      781 ttctgaccag cagatcctgc ctttcaggca ggggactcta caccgagctt tcacgggttc
      841 tacaagcagt gcagcctata acccagacta tcactcagga ttctttgtca gcaagatgag
      901 atctcctccc ctaaaaagac ataacccttc ctcagacagt ttccttggct caggtgacat
      961 aagaaccttt ggtcaaagtg caaatggaca atggagaaac tccactccag catcaggatc
     1021 agcattacaa aaaccaagaa atagccgaag tctttacctc gaaacccgga agacctcaag
     1081 atgtagaatc ctctggaacc gagttacaga cagttgtgga ttgtcaaaca cctttgtggg
     1141 caagtccaat caccactgcc atgtgtctgc ctatgaaaag tcattcccca tcaagcctgc
     1201 cccaagtccg tcctggagtg ggtcgtgtcg gcggagtctt ttaagcccca agaaaactca
     1261 gaggcgacat ttcagcacag cagaagagac agttcaagaa gaagaaaagg agatctacag
     1321 gcagctgctg cagatggtca cagggaagca gttctccgta gccaagccca ccacacattt
     1381 ccctttacat ctgtctcggt gtcttagttc caataagaac tctttgaaag actcactgtt
     1441 gagaaacggg aactcttgtg catctcatgt cattggttct gatacttcgt cctctggatc
     1501 tgccagcatt ttaactgcac aggaacagtt gtcccacagt gcacattccc tgatatctgg
     1561 taccccagat gttgcctttg gatccaaaga ctccgctctt caccatcacc tctctgcacc
     1621 tcatcagcca gacagtttac cagcatcaaa tccacagtct gaagggtcag actctgtgat
     1681 tttactcaaa gtgaaagaat ctcagacgcc agcttccagt ttcttctgtc tgacactggt
     1741 gtgaatccaa gtttaaatgt gctcctccac ctacaacttc acttcctgga ggtgtgggca
     1801 ctcgctctct gtgacagtca ttcacactgc tgtcctcatc atacaaagcc ttggcaatct
     1861 gcctactagg aagatagcag tagcagtttc ttgggagaag attgcaggtg acacaatgtt
     1921 ctgtctcagc ccatcccctg cttggcagcg ccattattta ctctgagctt tgggtattct
     1981 acaaagtttt ctctgttact tctttgagga gaacgaatgg tttggatttg ttatttcttg
     2041 catggtgttt agagtcaggt ctgacttccg cttgtagctt ttttggcctt catgttattc
     2101 tgaacctcgc ttgccaaaaa aagtgtgagc gttaagacct tacttacgct gtactgtatg
     2161 aagagtaact taccctaggc ttgtgtggtg catccctgtg actcggatgc ttacagggcc
     2221 aaagcaggag gatcacctca tcctcctcta acggtgagtt tgaacccaga ctagttcaaa
     2281 ggaagaaagg aaaacgaatg tatagttaag gcgtttagtg cttacagatg tatttctctc
     2341 tctctctctc tctctctctc tctctctcat tctctcccag aagaagttgg tgttggcttt
     2401 cctttatgga ggatttctcc caggaatgac ctgaagggtc ggtggaagga gaaaagaggg
     2461 agctgttgaa gagggagctg gagggatgag gggatgagta gtagttgtgg ctgaagctaa
     2521 gctgctgtcc caaggctggg ctcattacga ttagccttta gggccagctt ctggccacag
     2581 cctcttactt cagtccacca gtgaggactc accctgtcct tctggaatgt ggtgtgcaca
     2641 cctctacttc agacactcct gattcttctg actgcagttc ccattctttc cttgatctct
     2701 gatgaactct tactttttca gaatccgatt cagatggtag tttttctagg tggtgactct
     2761 gagccccaga tgacattaga cactcggcct cactgtgttt ttaccactta tatctttgca
     2821 ttaaaccacc cagtgatagt tttagtgtta tgggtgttta gtaaataaat ctttcctaac
     2881 aagtggacat ccaagaaagc tagaaggcat tcctgtggtc caagtacttg gttctccttg
     2941 ttgcttaacg tgttcgcaca ctgagaggca tgaggaaatg tagtctttgg gattggacag
     3001 agaagactta gaatacttgt tgtccagtac aatgtatcct tctgggcctc agcatggttt
     3061 tgtttggttt tccataaagt atgagtaata atttcatgtt gcatattata ttaaagatta
     3121 attaatatgg atatctcatg aggcttagca atatataaaa gcactaaggc agttttccta
     3181 gggcactagg atcacctgtg ctcagaatgc ttgtagctct tcctgctgtg tgtaatctca
     3241 ctagaaatgc aatttctctt ataattgtcc ttcctgagc
//
