LOCUS       NM_001108526            4326 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus semaphorin 4G (Sema4g), mRNA.
ACCESSION   NM_001108526 XM_001063153 XM_342055
VERSION     NM_001108526.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4326)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473986.1.
            
            On or before Oct 22, 2008 this sequence version replaced
            XM_342055.3, XM_001063153.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5756307,
                              SAMEA5760393 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4326
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q54"
     gene            1..4326
                     /gene="Sema4g"
                     /note="semaphorin 4G"
                     /db_xref="GeneID:361764"
                     /db_xref="RGD:1310436"
     exon            1..489
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     CDS             366..2879
                     /gene="Sema4g"
                     /note="sema domain, immunoglobulin domain (Ig),
                     transmembrane domain (TM) and short cytoplasmic domain,
                     (semaphorin) 4G"
                     /codon_start=1
                     /product="semaphorin-4G precursor"
                     /protein_id="NP_001101996.1"
                     /db_xref="GeneID:361764"
                     /db_xref="RGD:1310436"
                     /translation="MWGRLWPLLFSFLTATAVPGPSLRRPSRELDATPRMTISYEELS
                     WIRHFKGQAQNYSTLLLEEASQRLLVGARGALFSLSARDIGDGTHKEIHWEASPEMQS
                     KCHQKGKNNQTECFNHVRFLQRLNASHFYACGTHAFQPLCAAIDAEAFILPTSFEEGK
                     EKCPYDPARGFTGLIIDGGLYTATRYEFRSIPDIRRSRHPHSLRTEEAPMHWLNDAEF
                     VFSVLVRESKTSVVGDDDKIYYFFMEREEGSSSFTQSRSSHRVARVARVCKGDLGGKK
                     ILQKKWTSFLKARLICHIPQYETLRGVCSLDADTSSHTHFYAVFTLTTQWKTLEASAI
                     CRYDLAEIQAVFTGPFMEYQDGARRWGRYEGGVPEPRPGSCITDSLRSRGYNSSQDLP
                     SLVLDFVKLHPLMARPVVPTRGRPLLLKRNVRYTHLTGTHVSIPAGPTYDLLFLGTAD
                     GWIHKAVVLGSGMHIIEEIQVFRESQSVDNLVISPMQHSLYVGAASGVIQFPLSSCSR
                     YRSCYDCILARDPYCGWDSSTHACMVATTIANRTALIQDIERGNRGCEGSRDAGPPPP
                     FKTRSVLRGDDVLLPCDQPSNLARALWLLNGSKSLSDGQDGYRVGVDGLLVTDTQLEH
                     SGNYGCYAEENGLRMLLASYSLIVRPATPAPAPQAPATPGAQLAHDMRLFYVVAIAIL
                     GGLCLILASSLLYVACLRGGRRGRRRKYSLGRAGRAGGSAVQLQTVSGQCPGEEDDGD
                     DGEGAGSLESGCLQIIPGEGAPAPPPPPPPPPPAELTNGLVALPSRLRRMNGNSYVLL
                     RQSNNGVPAGPCSFAEELSRILEKRKHTQLVEQLDESSV"
     exon            490..638
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            639..701
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            702..800
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            801..894
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            895..1008
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            1009..1172
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            1173..1342
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            1343..1487
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            1488..1710
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            1711..1826
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            1827..1987
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            1988..2049
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
     exon            2050..4326
                     /gene="Sema4g"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagaacaga gaactggaac ttgccctgaa gttgggggca aggtgacccc ttcagtaccc
       61 tacaattctg ctgggatcct acaattccca ctctccatgg atttgataca gaaaggcacg
      121 tgacccaccc ctccctccga cttctcacct gtgattccat ggccacacaa ccctgtggct
      181 ccatgtcccc gccattccag gatcctccat ggccccatga ctacttgacc cccatgacct
      241 catgacccct cacctccatg tgatcacacc ctggactttg aacccagtga ctgatcttcc
      301 cctcccctcc tgtgactctt ccgggctgcc cttggggtct tgttggtctg aacttcccca
      361 ggaagatgtg ggggaggctc tggcccctcc tcttcagctt cctcacagca acagcagtgc
      421 ctggaccctc actgcggaga ccatcccgag agctagatgc caccccacgg atgaccatct
      481 cctatgaaga gctctcctgg atcaggcact tcaagggcca agcccagaac tattcaacac
      541 tgctgctgga ggaggcttcc caaaggctgt tggtgggagc tcgaggtgcc ctgttctctc
      601 tcagtgcccg tgacatagga gatgggactc acaaagagat ccactgggag gcctccccag
      661 agatgcaaag caagtgtcat cagaaaggga aaaacaacca gacggagtgt ttcaaccatg
      721 tgcgatttct acagcggctc aatgcctccc acttctatgc atgtgggacc cacgccttcc
      781 agcccctctg tgcagccatt gatgctgagg ccttcatctt gcctactagc ttcgaggagg
      841 gaaaggagaa atgtccttac gacccagccc gtggcttcac gggccttatc attgatggag
      901 gcctctacac agccacgcgg tatgaattcc ggagcattcc tgatatccgc cggagccgcc
      961 acccacactc tctgagaacc gaggaggcac ccatgcactg gctcaatgat gctgagtttg
     1021 tgttctctgt gctggtgcgg gagagcaaga ccagtgtagt gggtgacgat gacaagattt
     1081 actacttctt catggagcgt gaggaaggtt ccagcagctt cactcagagt cgcagcagcc
     1141 accgtgtggc tagagtagcc cgtgtgtgca agggagatct gggagggaag aagatcctac
     1201 agaagaagtg gacatccttc ctgaaggctc gcctcatctg ccacatccca cagtatgaga
     1261 cacttcgtgg ggtctgcagc ctggatgctg atacgtcatc ccacacacac ttctatgcag
     1321 tcttcacact gacgacacag tggaagactc tggaggcttc agccatctgc cgctatgacc
     1381 tggctgagat tcaggctgtc ttcacaggcc cttttatgga gtaccaggat ggtgcccggc
     1441 gctggggccg ctacgagggt ggagtccctg aacccaggcc tggctcgtgc atcacagatt
     1501 cattgcgcag ccgaggctac aactcatctc aagacttgcc atccctcgtt ctggactttg
     1561 tgaagttgca cccactgatg gctcggcctg tggtacccac acgtgggcgg cccctgctgc
     1621 tgaagcgcaa tgtacgctac acacatctca caggaacaca cgtcagcata cctgctggac
     1681 ccacctatga cctgctcttt ctaggcacag ctgatggctg gatccacaag gccgtagtcc
     1741 tgggctctgg gatgcacatt atcgaagaga tacaagtgtt cagggagtcc cagtctgtgg
     1801 acaatctagt tatctcaccg atgcagcaca gcctctatgt gggggctgcg agtggagtca
     1861 tccagtttcc tctgtccagt tgctcacgct accgttcctg ctatgactgc atcctggcac
     1921 gggaccccta ctgtggctgg gactccagca cccatgcctg catggtggcc accaccatag
     1981 ccaacaggac agcattgata caggacatag agagaggaaa tcgaggctgt gagggcagca
     2041 gggatgcagg accaccaccg ccattcaaga cccgatctgt gctccggggt gatgatgtcc
     2101 tcttgccctg tgaccagcca tctaacctgg cccgggcttt gtggctcctc aacgggagca
     2161 agagcctgag tgatgggcag gatggctacc gcgtgggagt ggatgggctg ctggtaacag
     2221 acacacaact ggagcatagt ggcaactatg gctgctatgc tgaggagaac ggcctccgta
     2281 tgctgctggc ttcctacagc ctcatagtcc ggccagccac ccctgcccca gctccacaag
     2341 cccctgccac acctggggca cagctggcac atgacatgag attgttctat gtggtagcca
     2401 ttgctatact tggtggcctc tgccttatct tggcatcttc cctcctctat gtggcttgtc
     2461 tgcggggagg cagacgaggt cgaagacgaa aatactcatt gggtcgggct ggccgggcag
     2521 ggggctcagc cgtgcagctg cagactgtct caggccagtg tcccggagag gaagatgacg
     2581 gtgatgatgg agaaggcgct ggcagtctgg agagtggctg cctccagatc atccctgggg
     2641 aaggagcccc agccccacca cccccaccac ctccaccccc acctgctgag ctgaccaatg
     2701 gactggtggc cctgcccagc cggctgcgaa ggatgaatgg caacagttac gtgctcctga
     2761 ggcagagcaa caatggagtg ccagcaggtc cctgctcctt tgcagaggag ctcagccgca
     2821 tcctggagaa gaggaagcac acgcagcttg tagagcagct agatgagagc tctgtttgaa
     2881 cctagcctcc taaacaaatg ctcttccaag ccagcctgtc tgccctaggc ggggccactg
     2941 cctccccaaa catccactct ccttcttgct cccaactcca tttccttctt ccaacttttt
     3001 gatgtctctg tagggctggc cagagtcatg gttagccaaa gtcccctctt cagtctccaa
     3061 gacacatgtg agcagcccag acccaccggt gctcctcaaa ggtaggtgct ccccagaacc
     3121 aagtactccg caaacccaga cccagtttct gtcccttgac ctaaagactt gggaggagag
     3181 gattgtcttc ttatcccatt atctgtccaa ccttcctctt cttctcaggt agggctctgc
     3241 aggtccagat ggcctcaatg tcaccaccct ctgcacagct gtgtgctggg tagtcctgaa
     3301 ttcagacaag acctctctct accagccacc tgagtcctgc ttccattccc atgtgcacat
     3361 ggaagaatgt ttatcagctg ggctgcagtg tcccgctcct cctcttgggg catccttgtc
     3421 tcactcctcc tagattcagg gcaccttcca attgtcacct tcctatctag tcctcttcag
     3481 tcccagcccc atgtggtaac cctttggcag gagtcaggga acaggccggc ttgggaggaa
     3541 agaagcatca ctcctctctt ctttcctctg taacccttgt gagtcagcct ccctcctcct
     3601 ctcattcaca tgcaagggtg ccagagctcc aggcatgtcc ttttcttgtg catatgtggc
     3661 aacacatcca cgtcatgtgc tgacatttcc acccacatgt acattctgaa cctccccttg
     3721 ctgcctcagt cagacctctg tctactgggc ttggtccatg gatatttcaa agggagattt
     3781 cccttcccat ttagctgtcc tcactgaact aggacaagtg gccaacactg cactcaatga
     3841 gccagcctcc ctcttaggga ccaagcaatt gcttctccta gaccagagca ggaggaagtg
     3901 atctgttatc tcacctggca catgaagccc attcctggaa ctatgcaaag ggcagaggct
     3961 gggagtttgg atgcttggct cccattcctg tcctacctca ccagggcact ttcaaggtcc
     4021 agggcctcag atgtctccag gcccatatgg gacaatcaac cctgactgag ctctcccatt
     4081 ccccttgggt gaggatgact gttatttttg tagctgagaa cgtggaaccc cacgagtttt
     4141 tactgccctt cacccatacc tctcccacct ccaccccaca atgaatgtat ttattgtgag
     4201 aatggctgta cttcttcagg aatgcccccc actcatcacc caggtgggtg gagcaggcat
     4261 gtgatggaat ggggagcctg ggctctgctc ctcctgatgt tggctaataa atgccctctt
     4321 tcccca
//
