LOCUS       NM_001013043            1629 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus secreted and transmembrane 1A (Sectm1a), mRNA.
ACCESSION   NM_001013043 XM_221217
VERSION     NM_001013043.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078937.1.
            
            On Mar 26, 2005 this sequence version replaced XM_221217.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078937.1, FQ225276.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN13663599 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.3"
     gene            1..1629
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /note="secreted and transmembrane 1A"
                     /db_xref="GeneID:287885"
                     /db_xref="RGD:1305973"
     exon            1..64
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /inference="alignment:Splign:2.1.0"
     exon            65..220
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..735
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /note="secreted and transmembrane 1"
                     /codon_start=1
                     /product="secreted and transmembrane 1 precursor"
                     /protein_id="NP_001013061.1"
                     /db_xref="GeneID:287885"
                     /db_xref="RGD:1305973"
                     /translation="MLTRPVVSTIPTLRLFSILLMVVSLNAQNKSWDRPICTENIVSV
                     PRGRPAVMSCNISNTFTDVTIQLTAHGKDRTIFKKKPQGNFSWSGWELHVQGGQAQLV
                     IKDAQDDHRGIYLWQLHGRQRYYRNITLNVSEPSNEDKVTDTRLFTSLPDQVKSSQLE
                     AKPGTLMGVIIAVLALGVPGILALICYRHCRSQKPHWVRRF"
     exon            221..529
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /inference="alignment:Splign:2.1.0"
     exon            530..583
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /inference="alignment:Splign:2.1.0"
     exon            584..720
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /inference="alignment:Splign:2.1.0"
     exon            721..1605
                     /gene="Sectm1a"
                     /gene_synonym="Sectm1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caagatcaga catccagtgg cagcagtggc ggtaacattg gggagcttgc tgaagaagag
       61 acagggagtg ttcccagaca tctggagagg acaacggtct cctaaggcct cccaccccac
      121 cgactggcca tgctgacccg tcctgtggtg tccaccatcc ctactctcag gctgttcagc
      181 atcctcctca tggttgtttc cctgaatgct cagaataaaa gctgggacag acctatctgc
      241 acggagaaca ttgtgtctgt gcctagaggc aggcctgcag tgatgagctg taacatctct
      301 aacaccttca ccgatgtcac catccagctg actgcccatg ggaaggacag gaccatcttc
      361 aagaaaaagc cccaaggaaa cttctcttgg agtgggtggg agctccatgt tcaagggggg
      421 caggcacagc ttgtcatcaa agacgcccag gacgaccaca gagggatata cttgtggcag
      481 ctgcatggac gccagagata ttacagaaac atcaccctga atgtttcaga gccttcaaat
      541 gaggacaagg tcacagacac gaggctgttc acatccctcc cagatcaagt caagagctcc
      601 cagctagagg ccaagcctgg gacccttatg ggagtcatca ttgctgtttt ggccttggga
      661 gtcccaggaa tccttgcact tatctgctac aggcactgcc gttcccagaa gccccattgg
      721 gtaaggaggt tctaagtctg tgcccagtgg aagctaatgg agctgcctgc agagttgatt
      781 ccagagagag gccaccagca tgggcttatc atgttcttcc tccttggagg cctctggaac
      841 cccaaacatc atggaatcat cattacatga ttgacagtgc aaaagacttt gttcagtttg
      901 ctgggcacaa aagacctttc cctgagggta atggagctct tggttctgtg cagaagaggg
      961 gacagtgact cactgaagaa ggaccttgga agttggaaaa cagtttaggc atttttggtc
     1021 acatgaacaa gaatatagct tcctgactat ggtcttcagt catctgatca gctcctcaac
     1081 tcttccccaa attgggaatt ccaaagcagc acagctcttg acgctcagca tggactcctt
     1141 ttcttctgct aaacctctga ggtcagggtc tctccactac ccaaagatct ccagcgtaag
     1201 cctgatgctg caccaaggtt tgcttcaggt agaacgtggg aacatacctg ctttctgact
     1261 gacaatggaa acgagtttgg gaaacccaga tgtcaggttc caagggccaa aatagggaga
     1321 taggacttta agatgaatca cctcccctct ccagcccctg caaggcagag tgctgtcaga
     1381 acagggttct atgaaagagt gcaggtgttg gttgccaggc attgctctct gagggtcata
     1441 gagaatctcg ggattccctg ggggtttctc tttagcagac ccctcctcca gccccaactc
     1501 cctgattcgt agccactatc cactgttttt tactgacctt ctgtcctggt tacaatgtta
     1561 tttttttcct tacaataaaa aaaaagattt ttgatagaaa atccaaaaaa aaaaaaaaaa
     1621 aaaaaaaaa
//
