LOCUS       NM_001135020             443 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus Sec61 translocon subunit gamma (Sec61g), mRNA.
ACCESSION   NM_001135020 XM_001057376 XM_001069684
VERSION     NM_001135020.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Lang S, Benedix J, Fedeles SV, Schorr S, Schirra C, Schauble N,
            Jalal C, Greiner M, Hassdenteufel S, Tatzelt J, Kreutzer B,
            Edelmann L, Krause E, Rettig J, Somlo S, Zimmermann R and Dudek J.
  TITLE     Different effects of Sec61alpha, Sec62 and Sec63 depletion on
            transport of polypeptides into the endoplasmic reticulum of
            mammalian cells
  JOURNAL   J Cell Sci 125 (Pt 8), 1958-1969 (2012)
   PUBMED   22375059
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Girard A, Sachidanandam R, Hannon GJ and Carmell MA.
  TITLE     A germline-specific class of small RNAs binds mammalian Piwi
            proteins
  JOURNAL   Nature 442 (7099), 199-202 (2006)
   PUBMED   16751776
REFERENCE   3  (bases 1 to 443)
  AUTHORS   Beswick V, Baleux F, Huynh-Dinh T, Kepes F, Neumann JM and Sanson
            A.
  TITLE     NMR conformational study of the cytoplasmic domain of the canine
            Sec61 gamma protein from the protein translocation pore of the
            endoplasmic reticulum membrane
  JOURNAL   Biochemistry 35 (47), 14717-14724 (1996)
   PUBMED   8942632
REFERENCE   4  (bases 1 to 443)
  AUTHORS   Hartmann E, Sommer T, Prehn S, Gorlich D, Jentsch S and Rapoport
            TA.
  TITLE     Evolutionary conservation of components of the protein
            translocation complex
  JOURNAL   Nature 367 (6464), 654-657 (1994)
   PUBMED   8107851
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DV719731.1, CB313385.1 and CR464634.1.
            
            On or before Sep 19, 2008 this sequence version replaced
            XM_001057376.1, XM_001069684.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV719731.1, CB313385.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680433, SAMN09767679
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2                 DV719731.1         1-2
            3-438               CB313385.1         4-439
            439-443             CR464634.1         4-8                 c
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q22"
     gene            1..443
                     /gene="Sec61g"
                     /note="Sec61 translocon subunit gamma"
                     /db_xref="GeneID:689134"
                     /db_xref="RGD:1596170"
     exon            1..71
                     /gene="Sec61g"
                     /inference="alignment:Splign:2.1.0"
     exon            72..171
                     /gene="Sec61g"
                     /inference="alignment:Splign:2.1.0"
     CDS             78..284
                     /gene="Sec61g"
                     /note="SEC61, gamma subunit; Sec61 translocon gamma
                     subunit"
                     /codon_start=1
                     /product="protein transport protein Sec61 subunit gamma"
                     /protein_id="NP_001128492.1"
                     /db_xref="GeneID:689134"
                     /db_xref="RGD:1596170"
                     /translation="MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGF
                     AIMGFIGFFVKLIHIPINNIIVGG"
     exon            172..274
                     /gene="Sec61g"
                     /inference="alignment:Splign:2.1.0"
     exon            275..443
                     /gene="Sec61g"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccggcttccg gttccgttgg gctcaattct ctcctaggct acgtgtctct gccctctcaa
       61 accgccatcc cacaaacatg gatcaggtaa tgcagtttgt cgagccaagt cggcagtttg
      121 taaaggactc gattcggctg gttaaaagat gcaccaaacc tgatagaaaa gaattccaga
      181 agatcgccat ggccacagcg attggattcg ctatcatggg gttcatcggc ttctttgtga
      241 aactgatcca catccctatt aataacatta ttgtgggtgg ctgagtcttt gctcatcgtg
      301 ggactggtga accaatgagg gggtgacaag ctcatgaagt aaaagttgcc tggatgcttt
      361 gtggtttttg tttctttcct cctaactatg acttttctat ttctaaatta aaataatttc
      421 aaaataaaca tttttccgta ata
//
