LOCUS       NM_001135584            1232 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus secretory blood group 1 (Sec1), mRNA.
ACCESSION   NM_001135584 XM_001080769 XM_218652
VERSION     NM_001135584.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Sherwood,A.L., Stroud,M.R., Levery,S.B. and Holmes,E.H.
  TITLE     An amino acid region at the N-terminus of rat hepatoma alpha1-->2
            fucosyltransferase modulates enzyme activity and interaction with
            lipids: strong preference for glycosphingolipids containing
            terminal Galbeta1-->3GalNAc-structures
  JOURNAL   Biochemistry 40 (19), 5708-5719 (2001)
   PUBMED   11341836
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Bureau,V., Marionneau,S., Cailleau-Thomas,A., Le Moullac-Vaidye,B.,
            Liehr,T. and Le Pendu,J.
  TITLE     Comparison of the three rat GDP-L-fucose:beta-D-galactoside
            2-alpha-L-fucosyltransferases FTA, FTB and FTC
  JOURNAL   Eur J Biochem 268 (4), 1006-1019 (2001)
   PUBMED   11179967
REFERENCE   3  (bases 1 to 1232)
  AUTHORS   Sherwood,A.L. and Holmes,E.H.
  TITLE     Cloning and expression of the catalytic domain from rat hepatoma
            H35 cell GDP-fucose:GM1 alpha 1-->2fucosyltransferase, an enzyme
            which is activated during early stages of chemical carcinogenesis
            in rat liver
  JOURNAL   Arch Biochem Biophys 355 (2), 215-221 (1998)
   PUBMED   9675030
REFERENCE   4  (bases 1 to 1232)
  AUTHORS   Piau,J.P., Labarriere,N., Dabouis,G. and Denis,M.G.
  TITLE     Evidence for two distinct alpha(1,2)-fucosyltransferase genes
            differentially expressed throughout the rat colon
  JOURNAL   Biochem J 300 (Pt 3) (Pt 3), 623-626 (1994)
   PUBMED   8010942
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Oct 2, 2008 this sequence version replaced
            XM_218652.3, XM_001080769.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR21887621.422326.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1232              JAXUCZ010000001.1  105287564-105288795 c
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..1232
                     /gene="Sec1"
                     /gene_synonym="Ftc; RGD1562499"
                     /note="secretory blood group 1"
                     /db_xref="GeneID:308586"
                     /db_xref="RGD:1562499"
     exon            1..1232
                     /gene="Sec1"
                     /gene_synonym="Ftc; RGD1562499"
                     /inference="alignment:Splign:2.1.0"
     CDS             1..900
                     /gene="Sec1"
                     /gene_synonym="Ftc; RGD1562499"
                     /EC_number="2.4.1.69"
                     /note="alpha 1,2-fucosyltransferase C"
                     /codon_start=1
                     /product="fucosyltransferase 10"
                     /protein_id="NP_001129056.1"
                     /db_xref="GeneID:308586"
                     /db_xref="RGD:1562499"
                     /translation="MFTINVRGRLGNQMGEYATLFALARMNGRLAFIPASMHSTLAPI
                     FRISLPVLHSDTARRIPWQKYHLNDWMEERYRHIPGHYVRFTGYPCSWTFYHHLRPEI
                     LKEFTLHDHVREEAQAFLRGLRVNGSQPSTFVGVHVRRGDYVHVMPKVWKGVVADRGY
                     LEKALDMFRARYSSPVFVVTSDDMSWCRKSIVASRGDVAFAGNGLQGSPAKDIALLMQ
                     CNHTVITLGTFGIWAAYLTGGDTVYLANFTQPSSPFHKVFKPEAAYLPEWVGIAADLE
                     QPNRGAPGHASARAPKSHQRTLL"
ORIGIN      
        1 atgttcacca tcaatgtcag aggccggctg gggaaccaga tgggcgaata cgccacattg
       61 tttgcactgg ccaggatgaa cggacggctt gcttttatcc ccgcatccat gcacagcact
      121 ctagcgccca tcttcaggat cagcctcccg gtgttacaca gtgacacagc cagaaggata
      181 ccatggcaga aataccatct caacgactgg atggaggagc gttaccgcca cattccggga
      241 cactatgtgc gcttcacggg atacccgtgc tcctggacct tctaccacca cctgcgccca
      301 gagatcctga aggagttcac tctgcatgac cacgtgcggg aggaggccca ggccttcctg
      361 cgtggtctgc gggtgaatgg gagccagccg agtacttttg tgggtgtcca tgtgcgtcga
      421 ggggactatg tgcatgtcat gcccaaggtg tggaagggcg tggtggctga ccggggttac
      481 ctggaaaagg ccctggatat gttccgggca cgctattcat ctccagtctt cgtggtcacc
      541 agtgatgaca tgtcctggtg ccggaagagc atcgttgctt cccgagggga cgtggcattt
      601 gctggcaatg gccttcaagg atcgcctgcc aaggacattg cattactcat gcagtgcaac
      661 cataccgtca tcaccttggg tacctttggt atctgggctg cctatctcac aggtggggat
      721 actgtttacc tggctaactt tacccagccc agctcccctt tccataaggt tttcaagcca
      781 gaagcagctt atctgcctga gtgggtgggc attgctgctg atctggaaca gccaaacaga
      841 ggagcccctg gccatgcctc agcaagagcc cccaagagtc accagaggac cttgctgtag
      901 tgcacatgct cagaggggcg gtggggggga gggtatgttg ttgtcgtgct cgtgctcgtg
      961 ctcgggacct cacagggatt cccagttctg ttttgcatgc ttctcagctg agtgattgca
     1021 ggtcaatgat gtcacctcac tgccttcctg aaactctgag cacagcctgg acttagctca
     1081 gcagcaacag cacaggtact ttgagctcct ccatgcccac actgttagcc atcataggcc
     1141 taacattggc tgcatctgga gtgctgtgtc acggaggcca gtgtgtagtt agggtttctg
     1201 cggctctgat aaaacaccat ggccatggac aa
//
