LOCUS       XM_017595219            6391 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus short chain dehydrogenase/reductase
            family 9C, member 7 (Sdr9c7), transcript variant X2, mRNA.
ACCESSION   XM_017595219
VERSION     XM_017595219.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017595219.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017595219.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6391
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6391
                     /gene="Sdr9c7"
                     /note="short chain dehydrogenase/reductase family 9C,
                     member 7; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 19 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:259235"
                     /db_xref="RGD:628716"
     CDS             4848..5789
                     /gene="Sdr9c7"
                     /codon_start=1
                     /product="short-chain dehydrogenase/reductase family 9C
                     member 7 isoform X1"
                     /protein_id="XP_017450708.1"
                     /db_xref="GeneID:259235"
                     /db_xref="RGD:628716"
                     /translation="MAALTDFAFMYRWFKNCNLVKNLSEKYVFITGCDSGFGNLLARQ
                     LVDRGMKVLAACLTEEGAQKLLQDTSYQLQIFLLDVTKSESVKAAAQWVRDQVGEQGL
                     WALVNNAGVGLPSGPNEWLTKEDFVKVININLVGLIDVTLNMLPMLKKARGRVVNMSS
                     SGGRVAVIGGGYCVSKFGVEAFSDSIRRELHFFGVKVSIIEPGNYKTSILGQEALQSR
                     MRKLWDRLPQETRDSYGEEYFQTYTDKLVNLMRTAEPRISDVTNSMEHAIVSRSPRIR
                     YNPGLDVKLLYIPLSKLPTPVTDFILSRYLPKPADSV"
ORIGIN      
        1 ggactgaggt gggacccaga taagcttcag aaggccagca gtcgggagga aacagaaggc
       61 gccgtgcccc tgcctaccac agcccctgct gcccacagtc tttcaagtct gaatagcagt
      121 caggctcctt ttgactcagt ttggtgcctg ttctcttgca aaccctctgg ctgtagctgt
      181 tggccatagt gggcctgtgg aattcataca gggagaggca ggtggtggtg agccacgcac
      241 agacaagcag accctcacca tgggctggga cctagctctg ggatctgctg gccagacagc
      301 tgcatgaggt tgttggctga acatcaaatc tgaagagaaa ggagctgaac agtggaggaa
      361 caggacctca gacatactgg agactgtgac cctggacatc aacaagccat agagcatggc
      421 tgtagtctct aaagggtaaa gggtgtaggg agagggaggg agtggcttcc tgaggtacta
      481 cctacattcc tgtctgcatc ttgtctgtgt gtgaaaggaa caacctcttt actggcaaac
      541 ttcctcagag atctgggagg cttggaggga agaataaacc acaacagaaa aacaacaaaa
      601 taataataaa aagtctgcta gcttcctttt cttacccaca agccattatg agcctgggag
      661 gtgggaggct aggcaggttg ccaaagtttg gggcccagct gagagctgaa gtgccttcct
      721 tgctgggaaa gagaactgag gcatgaggcg gtatcctgag caaggcctgt tgatctgttg
      781 gatgtgtgtg acatatggac aggtaatatt gggacagagc atagtcaaga atatgccaaa
      841 tctttgcagc aatacgctcc tcaaaatggc atcactgtgg ttttcagccc caggggccgt
      901 acttcctggt tccctgggtt tgctttctca ttgacccagg tcctgcctta cgtgtggatt
      961 ggattttgtt tcttcttctg aattctctat agcgcctccc tttggagtac attagtgttg
     1021 gctgtaatgg agcctggctt ctccaaaaag gacaaaacca gcccagtggg ccacatgggg
     1081 accttccagg atgccaggga cagggtcagc ctggaagcca ggggatctct ggggagatgt
     1141 ttctggcatt tatgactgat ccgaacacag tgggaagagg aagagatctc tatccagagt
     1201 tctgtgctcc cactgtcatc ttcatcatta cctcggtccc tccttcctgc tctacttatg
     1261 tccccaaatg tggatgttta ggcctcttgg gtaccacatg gccatgattg cttcttaaaa
     1321 atatccaggc atggggttgg ggatttagct tagtggtaga gtgctaaggc cctgatttgg
     1381 tcccagctcc gaaaaaaaga aaaaaaaaat gttcaggcac atcgcaatta ggaccattat
     1441 tttgtctaag acttacctct gatttctttt aaattttatt ttactggtct aattaaaaca
     1501 ttttaagaca ttctcttgta tccactctgg tgagttgtga taggtaatgt gtgggtgggg
     1561 aatggagagg taacagggct ccacctctct atatctgccc cagggttttc ctgagacatt
     1621 aatcttgatc ccagggagca caaggaatac aaactatgtc tttcagatga ggaattgtat
     1681 atacatgtgc atagtaagcc accattcaag gctccgagga cccatccttc acctgcccca
     1741 gagtactttg ctttttgaga tggggcatga gcaggggcag aggaactgga ctcagtttat
     1801 ctagttctgt ctccctccta cctccttagg gtatgtttca gtgtggccag tccttgctct
     1861 ctcaaagggt gaccatttta ctttggaaga ctcctgtgga cactgagtga gcttgagaaa
     1921 gcacacggct gcctgaattc tcaggcctca cgggccagct aggtgagcag atctggcgtt
     1981 tgaaagtggg aaccactctt aacattgtat acggccctac ggttctcagc ctacaatttt
     2041 attgagtcca ggcagccacc acctgggcaa gaatcagtag agaggcctag aaggtgactg
     2101 gatccagggt aggcctactc caggtcgttt ctgaattatt ctcttctggg gctagatacc
     2161 tcaaatgtat ctgtgtctcc caagaactga atgcctgctg ccccgcagcc ggatcagccc
     2221 ttaaggagca ttgctttgtc ctaggcataa tgtccttgat cactgactta cccagggggt
     2281 caacagaaac ctgtacagga catgccatgg cctcaaggaa agtatgaagc acgtaggttt
     2341 gtcacccacc actgcccatc tccatcacct atgcaccttg ggtctgccct ttagagatgg
     2401 gttgatgaac cccataccat tggtacagaa tgacccagtc ttgtgtgagg actaaagtta
     2461 tgttttaagt ttaaattact gtgcctaaga gatctgttga acagaagtgc ctctaactgt
     2521 aagcctctct tgcccaagaa cagagaactc cctggagtgt gggggtctgc tgtccaggaa
     2581 agacaacaag ccacatgttt tcacttctgt aaacaaggtc ggttgcccca actgtacagc
     2641 tcccacataa ggtgtgtgtg tgtgcggtgc tatgtcgagg tgggtgcttg cccccatttg
     2701 gacaaggtgg gaagtctata acctgctgga atttgcttta aaagcagcta aggtaataca
     2761 tggtcattct ttgggaacca caggtgtcaa cctaggcatc ggcatagtcc tggccagtat
     2821 ttaataagtg tgcttcaaat ctgtctcaaa aaattctact agttattctc acccaggggg
     2881 gttaacagtt gatgtgatac tctctttacc tgcctccact ggtaaagagt agggcacaaa
     2941 gacataccca ttgctcccct tctttagggg aacttttgct tcagatttct gtatcagacc
     3001 ctctaaacaa ggacgaggtc agccagtgac ctttctcatc ctgatgaccc tggatgtcga
     3061 acctcgaagc agtaccaggt ccctgaaatg tacccaatgc tgggcgtggc ccctctaggc
     3121 tcacacaccc agctgatttc cttctttcct ttgcttcagc agcatccccg cctgactttc
     3181 tgcgagctct ccactcactc tctgtaatct ctctctggaa gtgctgcccc tgataatttt
     3241 caaatcttgg cctcactctc cctatcaatt atctcccttg gacccagaac tctgcccaag
     3301 ctcttctcac ggtttcagtg agttcattgc ccaacctcat cccgtctggc ggcccggcag
     3361 tctcagagaa cctcaggtca gagatatcca tcccctaact tccctcgatg ctgtgtcttt
     3421 agctcctgac ttctctgacc atcatctgct gtttcgtctg tccttggccc catacgttct
     3481 cttcgtttca acttctgctc cctctctctt gcatatccag ctagccacag catcacgtgg
     3541 tgcgttagtc cctccctcgt tctgccacct tccctgcctt ttaggctctc cagtttgaac
     3601 ttcctaaaac gtgcctggtc cttgggatag aaagaaaaga tctttcccca agagcccttt
     3661 cctcggggag cccgtgagcc ctcagtactg ggcttttaca atgaccaggt caccagctag
     3721 taggattggt ggaatcctgg gctggtttcc gccggtggag gttccttgct ggtaactcga
     3781 ctatcacttg ccttccatcc cccaaggttc tggttggttt ggggcgtttt gtttgtttga
     3841 aacaggatct catgtagtcc agttttttgg cctctggcta gctatgtagc taaggatgac
     3901 ctttgaactc cagatcctac tgtttctacc tcccaagcgc tgaaacaaat tcgtggaacc
     3961 acacccagct gttagagcct ctctactttt tagaagctga aactcgtatc tccagcctct
     4021 ccgagagaga ctcgggagtc aggaagtgga gtcacaccca gcccgggaaa accctgtgtt
     4081 ttttatcacc tctcatgacg gagactcacc atctgcagag aacttcgtca ttgtggcccc
     4141 tgcctgaaat cccagcacca ggcagaggca ggattgccac ccgttttaag tcagtttggt
     4201 aagttcaggc taggccagcc agggctgtta ggagactgtg tcagcatcta aaccaaacta
     4261 aattaattaa agatctctaa gggctgacga gctagtgttc gttcctactg gaactgggaa
     4321 cttgcaattc agcttttgtt tgcttcgtat taatgatttt gtctctctct ccttttttct
     4381 tcagataata caaattaaac ctgttgactt acctgaatgc atggcaggtg gttttgatcc
     4441 ctaggcagga ggtaaaactg gggtggggtt ttcttaagag agcttgggtc agagcggaat
     4501 cctttatctc ttgtgcccct tcccagaatg cacttgcgtt cccccgacta tgaatctccc
     4561 catttttgga tcccgccctg aaaggtggag aggagagatg gagaggccag ggcagtggct
     4621 ttgtcagagt gacacactgc aggttggact tgaatttctt gcatctgagc taattgctgt
     4681 ggtaatgcag ccacctataa aattacagag cggctcgccc agatgcccat atctgttgca
     4741 agtctcagaa gctccccttt cctgtgggtt cccgaaggct gcctgctggg ctctgagcat
     4801 cagcctatcc tactgcctcc taggtcggtc ctcggacatc agctccaatg gccgccctca
     4861 cggactttgc ttttatgtac cgttggttta aaaattgcaa tctggtgaaa aacctctctg
     4921 agaagtatgt cttcatcact ggctgtgact ccggctttgg gaacctgttg gccagacagc
     4981 tggttgatag gggcatgaaa gtgcttgctg cctgcctcac ggaggaaggg gctcagaaac
     5041 tcctgcagga cacctcctac cagctacaga tcttcctcct agatgtcact aagtcggaga
     5101 gcgtcaaggc agcagcccag tgggtgaggg accaagtggg cgagcaaggc ctctgggccc
     5161 tggtgaacaa tgctggagtg ggcctgccca gtggtcccaa cgaatggttg accaaggaag
     5221 actttgtgaa agtgatcaac ataaacctgg tggggttgat tgatgtcaca ttgaacatgc
     5281 tgccgatgct caagaaagcc cggggcaggg tggtcaacat gtccagctct ggtggccgag
     5341 tggctgtcat cggtggcggt tactgtgtct ccaagtttgg tgtggaagcc ttctctgata
     5401 gcatcaggcg agagcttcat ttcttcgggg tgaaggtcag catcatcgag ccaggaaact
     5461 acaagacatc cattctgggc caagaagctc tgcaatcacg catgagaaag ctgtgggatc
     5521 ggctgccaca ggagacccga gatagctacg gagaggagta tttccaaacc tacactgaca
     5581 agttggttaa cttgatgcgg acggcagaac caaggatcag cgatgtcacc aacagcatgg
     5641 agcatgccat tgtctcccgg agcccccgca tccgctacaa ccctgggctg gatgtcaagc
     5701 ttctctatat ccccctgtct aagttgccca cccccgtgac agatttcatc cttagcagat
     5761 acttgccgaa gccagcagat agtgtttgag ctggcaagct caaggagtag ccgttagggc
     5821 gtaggggaga gggcaaagga ccatgggatc atgagaggtg ggcagagaac agcatgctgg
     5881 gctcattccc actgcagact gaagtctcct cccatctgct ggggcctcaa gaaacctgat
     5941 gaagcccctg ctgatttaga gggttgcagc ataggcccca agacacctgt caccaaggca
     6001 ggtacttgtg gtccttggcc tggaaaggtc gagaagaaag ctgacttcta ctgaatgaca
     6061 agctgtcacc acctctgcaa aacaccttgg gacaatctag cccacaggag aatcccggcc
     6121 ccctccccca cagctctcta agcaggcgct ggtttgtgta tatatgaaat acgtaacgtg
     6181 gcagcaagaa ctgccagggc atatccagag aaggttttaa gtagtttttt tttctttgca
     6241 tttctctatc tgtaggtgac cggggtccat ataacacttg attctttaat caccactggt
     6301 taatgtttca ggtatttatt gagcacttac tacctaccag caccaaagca ctcgctggag
     6361 gtatgtgagg atgatgaagt catgaacttg a
//
