LOCUS       NM_001109433            1064 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus stromal cell-derived factor 2-like 1 (Sdf2l1),
            mRNA.
ACCESSION   NM_001109433 XM_001059596
VERSION     NM_001109433.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Yagil Y, Markus B, Kohen R and Yagil C.
  TITLE     Three interacting genomic loci incorporating two novel mutations
            underlie the evolution of diet-induced diabetes
  JOURNAL   Mol Med 22, 560-569 (2016)
   PUBMED   27463508
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Tiwari A, Schuiki I, Zhang L, Allister EM, Wheeler MB and Volchuk
            A.
  TITLE     SDF2L1 interacts with the ER-associated degradation machinery and
            retards the degradation of mutant proinsulin in pancreatic
            beta-cells
  JOURNAL   J Cell Sci 126 (Pt 9), 1962-1968 (2013)
   PUBMED   23444373
  REMARK    GeneRIF: SDF2L1 increases the time that misfolded proteins have to
            achieve a correctly folded conformation and thus that SDF2L1 can
            act as a buffer for substrate availability for ERAD in pancreatic
            beta-cells.
REFERENCE   3  (bases 1 to 1064)
  AUTHORS   Meunier L, Usherwood YK, Chung KT and Hendershot LM.
  TITLE     A subset of chaperones and folding enzymes form multiprotein
            complexes in endoplasmic reticulum to bind nascent proteins
  JOURNAL   Mol Biol Cell 13 (12), 4456-4469 (2002)
   PUBMED   12475965
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473999.2.
            
            On Oct 4, 2007 this sequence version replaced XM_001059596.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ230956.1, FQ225991.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q23"
     gene            1..1064
                     /gene="Sdf2l1"
                     /note="stromal cell-derived factor 2-like 1"
                     /db_xref="GeneID:680945"
                     /db_xref="RGD:1585844"
     exon            1..238
                     /gene="Sdf2l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..717
                     /gene="Sdf2l1"
                     /note="stromal cell-derived factor 2-like protein 1"
                     /codon_start=1
                     /product="stromal cell-derived factor 2-like protein 1
                     precursor"
                     /protein_id="NP_001102903.1"
                     /db_xref="GeneID:680945"
                     /db_xref="RGD:1585844"
                     /translation="MLGASRGLAGLTLLGLLLALSVRSGGASKASAGLVTCGSVLKLL
                     NTHHRVRLHSHDIKYGSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGLPVRCGQA
                     VRLTHVLTGKNLHTHHFPSPLSNNQEVSAFGEDGEGDDLDLWTVRCSGQHWEREASVR
                     FQHVGTSVFLSVTGEQYGNPIRGQHEVHGMPSANAHNTWKAMEGIFIKPGADPSTGHD
                     EL"
     exon            239..435
                     /gene="Sdf2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            436..1064
                     /gene="Sdf2l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttgaggacgg aagcgccgag gtccaaagca actggaaccc ggccggccgg cacgatgttg
       61 ggcgcgagcc gcgggttagc gggtctgacg ctgctggggc tgctgctggc gctctcggtg
      121 cggagcggtg gcgcgtcgaa ggccagcgcc gggctagtga cctgcgggtc agtgctgaag
      181 ctactcaaca cccaccacag agtgcggctg cactcacatg acatcaaata cggatccggc
      241 agcggccaac agtcggtaac cggcgtggag gcgtccgacg atgccaatag ttactggcgg
      301 attcgcggcg gctccgaggg tgggtgcccg cgcgggctcc cagtgcgctg tgggcaggca
      361 gtgcggctca cgcacgtgct caccggcaag aacctgcaca cgcaccactt cccgtcaccg
      421 ctatccaaca accaggaggt gagtgctttt ggggaagacg gtgagggtga tgacctggac
      481 ctgtggacag tacgatgttc tgggcaacac tgggagcgag aggccagtgt ccgtttccag
      541 catgttggca cctctgtgtt cctgtcagtt actggtgaac agtatggtaa cccaatccgt
      601 gggcagcatg aggtgcatgg catgcctagt gccaatgcac acaacacgtg gaaggccatg
      661 gaaggaatct tcatcaagcc cggagcagat ccctccacag gtcacgatga actctgagcc
      721 ggatgggaag ggagggtggc tgagtgggaa tccgcagggc tgctcttgtg taagactctg
      781 taggggccct caagtgcctt tctgattaaa gaatgttggt ttgtgattat ttttgctgta
      841 ccctggggag gacctgaggg tgctagtcat atctgtccac atcatcatct cacatgtctc
      901 aagtacctgt tcaaataatt tttgagaccg tcccactatg tatccctggc tggcctggaa
      961 ctcccagaga tccacttgcc tctgcctcct gagcgctggt attaaaggtg tatacgacca
     1021 cagctggccc caacctgttc aataaactaa tttttattac agtg
//
